Pungitius pungitius (ninespine stickleback): 119224483
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Entry
119224483 CDS
T07626
Symbol
gldc
Name
(RefSeq) glycine dehydrogenase (decarboxylating), mitochondrial
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug00260
Glycine, serine and threonine metabolism
ppug00630
Glyoxylate and dicarboxylate metabolism
ppug00670
One carbon pool by folate
ppug00785
Lipoic acid metabolism
ppug01100
Metabolic pathways
ppug01200
Carbon metabolism
Module
ppug_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
119224483 (gldc)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
119224483 (gldc)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
119224483 (gldc)
00670 One carbon pool by folate
119224483 (gldc)
Enzymes [BR:
ppug01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
119224483 (gldc)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
119224483
NCBI-ProteinID:
XP_037337360
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All DBs
Position
5:complement(20138583..20150942)
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AA seq
1030 aa
AA seq
DB search
MQSCAKSWGIFLAKSVNPGAPCRRLSDKSRVVPKLQWRIRRGGASSPATARALRTSAAVS
SRQIERILPRHDDFAERHIGPGEREKREMLDALGVESLEQLIEDTVPSSIRMQRSMKMDD
PICENEILETLKKIASKNKVWRSYIGMGYYNCLVPPPIQRNLLENSGWVTQYTPYQPEVS
QGRLESLLNYQTMICDLTGMPMANASLLDEGTAAAEAMQLCHRQNKKRTFYIDPRCHPQT
IAVVRTRANYIGVKTELKLPHEMDFSGKDVSGVLFQYPDTDGRVEDFTALVDRAHKGGAL
ACCATDLLALCVLRPPGEFGVDIALGSSQRFGVPLCYGGPHAAFFAVKENLIRMMPGRMV
GVTRDAAGKEVYRLALQTREQHIRRDKATSNICTAQALLANMAAMFALYHGPQGLQHIAE
RTHNAALILAEGLKRAGHRLHSDMFFDTLKINCSVAAKDIVERAEQRQINLRVYTKGVLG
VSLDEMVTERDLDDLLWVFGCESSAELIAEKMGERVKGIMGSPFKRTSKYLTHQVFNSHH
SETNIVRYMKRLENKDISLVHSMIPLGSCTMKLNSSSELMPITWSEFANIHPFVPLDQAD
GYQILFKQLEKDLCEVTGYDRISFQPNSGAQGEYAGLAAIKAYLNSKGESARTVCLIPKS
AHGTNPASAQMAGMKVQVVEVDKDGNIDLAHLTALVDKHKANLAAMMVTYPSTFGVFEEK
IRDICDLIHKNGGQVYLDGANMNAQVGLCRPGDYGSDVSHLNLHKTFCIPHGGGGPGMGP
IGVKAHLAPFLPSHPVVPMYSVNASSSLGTISAAPWGSSAILPISWAYIKMMGSKGLAHA
TEVAILNANYMAKRLEGHYKVLYRGRKGFVAHEFILDVRPFKKTANIEAVDVAKRLQDYG
FHAPTMSWPVAGTLMIEPTESEDKAEMDRYCDALLGIRQEIADIEEGRMDSRVNPLKMAP
HSLACIASSTWDRPYSRELAAFPLPFIRPETKFWPSISRIDDIYGDQHLVCTCPPMEAYE
SPYEEKRASS
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgcagagctgcgccaaatcctgggggatttttctggccaagtcggtgaatccgggcgca
ccgtgcaggcgtctgagtgacaagagccgcgtggttccgaaacttcagtggaggatccga
cgcggcggcgcatcttcgcccgcgaccgcccgggctctgaggacgtcggcggcggtctcc
tccaggcagatcgagaggatcctacccagacatgatgatttcgcagagaggcacatcggt
ccaggtgagcgggagaagagagaaatgctggatgctctgggagtcgagtcgctggagcag
ttgatcgaagacacggttccgtcctccatccggatgcagcggagtatgaaaatggatgac
ccgatctgtgagaacgagattctggaaactctaaagaagatcgcgtcaaaaaacaaagta
tggaggtcctacatcggcatgggctactacaactgcttggtcccgccgcccatccagcgc
aacctcctggagaattcaggctgggtgactcaatacaccccctaccagcccgaggtctct
caaggtcgcctggagtcgctccttaattaccagaccatgatctgtgacctcactggcatg
cctatggccaacgcctccctgctggacgagggaacggctgccgccgaggccatgcagctc
tgccacaggcagaacaaaaaaagaaccttctacatcgacccgcgctgccacccccagacg
attgccgtggtgcggaccagagccaactacatcggtgtgaagacggagctgaagctccct
cacgagatggacttcagcgggaaagacgtgagcggcgtgctcttccagtaccccgacacc
gacggcagggtggaagatttcacggccttggtggaccgggcgcacaagggaggggcgttg
gcttgctgtgccaccgacctgttggccctctgcgtgctgcgcccccccggggagtttggc
gtcgacatcgcactgggcagctcccagaggtttggggtccccctctgctacgggggcccc
cacgccgccttcttcgccgtcaaagaaaacctgatccgcatgatgcccggcagaatggtc
ggagtcacgagggatgcagccggtaaggaggtttaccggcttgctctgcagaccagagag
cagcacatccgaagggacaaagctaccagcaacatctgcaccgcacaggcactgctggcc
aacatggctgctatgtttgcactgtatcacggtcctcagggactccaacacatcgctgag
agaacgcacaatgcagccctgatcctcgctgaaggtctgaagagagccggacaccgtctg
cacagtgacatgttcttcgacactctgaagatcaactgcagcgtggcggccaaagacatc
gtggaaagagccgagcagaggcagatcaacctgagggtttacaccaagggagtgttgggg
gtctctctggatgagatggtgactgagagggacctggatgacttgctctgggtctttggc
tgtgaatcttcagcagagctgattgctgagaagatgggcgagcgagtaaaggggatcatg
ggaagtcctttcaagaggacgagcaagtacctgacgcaccaggtcttcaacagtcatcac
tccgagaccaacattgtgcgatacatgaagcgcctggagaacaaagacatttccctggtg
cacagcatgattccactgggctcctgcaccatgaagctaaacagctcctcagagctcatg
ccaatcacctggagcgagttcgccaacatccaccccttcgtgcctctggatcaggctgat
ggctaccagattctctttaaacagctggagaaggacctctgtgaggtgacgggctacgac
cgcatctccttccagcccaacagtggtgctcagggagaatacgccggcctggctgccata
aaggcctacctcaactcgaagggggagagcgccagaactgtttgtctgatccccaagtcg
gcccacggcaccaacccggccagcgctcagatggccggcatgaaggtccaggtggtggag
gtggacaaggacggcaacatcgacctggcccacctcacggcgctggtggataaacacaaa
gcgaatctggcagccatgatggtcacctacccttccaccttcggtgtgtttgaggagaag
atccgagacatatgtgatctcattcacaagaacggcggccaggtgtacctggatggcgcc
aacatgaacgcccaggtcggtctgtgtcgtcctggagattacggctctgacgtgtctcac
ctcaacctgcacaagaccttctgtatccctcatgggggaggaggacccggcatggggccc
atcggagtgaaggcccacctcgcccccttcctgccgagccaccccgtggtccccatgtac
tcggtcaacgccagcagctcgctgggcaccatcagcgccgccccctggggctccagcgcc
atcctgcccatctcctgggcctacatcaagatgatgggatccaaaggacttgctcacgcc
acagaggtggccatcctcaatgccaactacatggccaagaggctggaaggtcactataag
gtcctctacagaggcaggaaaggatttgtagcccacgagttcattctggatgtgaggccc
ttcaaaaagacggctaatatcgaggctgtggacgtggccaagaggctgcaggattatggt
ttccacgcgcccaccatgtcgtggccggtggccggaaccctgatgatcgaacccaccgag
tccgaggacaaggccgagatggaccggtactgcgacgccctgctcggcatccggcaggag
atcgccgacatcgaggaggggaggatggactctcgcgtcaacccgctcaagatggcgccg
cactctctggcctgcatcgcgtcgtccacctgggaccggccgtactccagggagctcgcc
gccttccccttgccattcattcgacccgagaccaagttctggccgagcatctccaggatc
gacgacatctacggcgaccagcaccttgtgtgcacctgcccgccgatggaggcctacgag
tcgccgtacgaggagaagagggcctcctcgtag
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