Pungitius pungitius (ninespine stickleback): 119224488
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Entry
119224488 CDS
T07626
Symbol
vcp
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04137
Mitophagy - animal
ppug04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119224488 (vcp)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
119224488 (vcp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119224488 (vcp)
03009 Ribosome biogenesis [BR:
ppug03009
]
119224488 (vcp)
04131 Membrane trafficking [BR:
ppug04131
]
119224488 (vcp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppug04147
]
119224488 (vcp)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
119224488 (vcp)
Ribosome biogenesis [BR:
ppug03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
119224488 (vcp)
Membrane trafficking [BR:
ppug04131
]
SNARE
SNARE associated proteins
Others
119224488 (vcp)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
119224488 (vcp)
Exosome [BR:
ppug04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119224488 (vcp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
Vps4_C
RNA_helicase
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
ABC_tran
DUF815
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
119224488
NCBI-ProteinID:
XP_037337366
LinkDB
All DBs
Position
5:12164733..12173371
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGESKNDDLATAILKQKTRPNRLIVDESINEDNSVVSLSQTKMDELQLFRGDTVLMK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIRREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFKWALSQSNPSALRETVVEVPNITWEDIG
GLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMSILKAN
LRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRECIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPTSTAGG
SGPTNGSGGTGSGPVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggaggggaatccaaaaatgatgacctagccactgcaattctgaaacaaaag
accagacccaacagactgattgtcgatgaatccatcaatgaagacaacagtgtggtctct
ctctctcagacaaagatggacgagctgcagctcttccgcggagacactgtgctgatgaag
ggaaagaagaggcgggagactgtgtgcattgtgctgtccgatgatacctgttcagatgaa
aaggttcgcatgaacagggtggttcgcaacaatctgagagtcagactgggtgatgtcatc
agcattcagccatgtcctgatgtgaagtatggaaagaggatccatgtcctcccaatagat
gacaccgtagaaggaattactggcaacttgtttgaggtctaccttaagccatactttctg
gaggcttacaggccaatccgcaaaggtgacatcttcttggtcagaggaggcatgcgtgct
gtggagttcaaggtggtagagactgacccctctccctactgcatcgttgctcctgataca
gtcatccactgtgagggagagccaatccggagagaggatgaggaagagtccctgaatgag
gtgggctatgatgacattggaggggtgaggaagcagttggctcagattaaagagatggtg
gagctgcctctcaggcaccctgcactttttaaggccattggagtcaagcctccacgtgga
atccttttatatggacctcctggaactggaaagactttgattgccagagctgtagccaat
gaaactggagctttcttcttcctgattaatggtcctgagatcatgagtaagctggcagga
gagagcgagagtaacctgagaaaggcctttgaggaagcagagaagaatgctcctgccatc
atctttattgatgagcttgacgcaatcgctcctaagagagagaagacccatggagaagtg
gagaggcgcattgtttcccagctgctgactcttatggacggactgaaacaaagggctcat
gtgattgtcatggctgccaccaacagaccaaacagcattgacccagctctcaggagattt
ggacgttttgatcgcgaagtggacattggaatccccgacgccactggcagattggaaata
ctccagattcacaccaagaacatgaaactggctgacgatgttgacttggaacaggtagcc
aatgagacccatggacatgtgggtgcagatctggctgctctctgctctgaggctgccctg
caggccatcaggaagaaaatggacctgattgaccttgaggatgaaaccattgatgctgaa
gttatgaactcacttgctgtcactatggatgacttcaagtgggctctgagccagagcaat
ccatctgcactgagggagactgttgtcgaggttcccaacatcacctgggaggacatcgga
ggtctggatgatgtcaagagggagctccaggagttggtgcagtaccctgtggagcacccg
gacaagttccttaagtttggcatgaccccatccaagggtgtgctattctatggtccccct
ggttgtggtaagactctgctggccaaagccatcgccaacgagtgccaggcaaatttcatc
tccattaaaggacccgagctgctaaccatgtggtttggagagtctgaggccaacgtcagg
gagatctttgacaaggctcgccaagcagcaccttgcgtcctcttctttgatgagctggac
tccatagcaaaggcccgtggcggcaacgtgggagatggtggcggagcagctgaccgcgtc
atcaaccagatcttgacagagatggacggaatgtccagcaagaagaatgtcttcatcatt
ggagccacaaatagaccagacatcatcgaccccgccatcctgagacccggccgtctcgat
cagctcatctacattcctctgcccgatgagaagagcaggatgagcatcctgaaggccaac
ctccgcaagagccccatcagcaaggatgtggacttggactttttggcaaagatgaccaat
ggtttctctggagctgatcttacagagatctgccagcgggcgtgtaagctggccatcaga
gagtgcatcgagaatgagatccgtcgagagagggagaggcagaccaacccgtctgctatg
gaggtggaggaggatgatcctgtgccagaaatcaggaaagatcactttgaggaggcaatg
cgatttgctcgtcgctccgtcagtgacaacgacattcgcaaatatgagatgtttgctcag
acactgcagcagagccgaggctttggcagcttcaggtttcccaccagcactgcaggcggc
agtggtccaaccaacggctcaggaggtaccggcagcggccccgtgttcaatgaagacaac
gacgatgacctttatggataa
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integrated database retrieval system
