Pungitius pungitius (ninespine stickleback): 119224556
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Entry
119224556 CDS
T07626
Symbol
si:dkey-32e23.4
Name
(RefSeq) dynamin-1-like protein isoform X1
KO
K17065
dynamin 1-like protein [EC:
3.6.5.5
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04217
Necroptosis
ppug04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
119224556 (si:dkey-32e23.4)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
119224556 (si:dkey-32e23.4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119224556 (si:dkey-32e23.4)
03029 Mitochondrial biogenesis [BR:
ppug03029
]
119224556 (si:dkey-32e23.4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppug04147
]
119224556 (si:dkey-32e23.4)
Enzymes [BR:
ppug01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
119224556 (si:dkey-32e23.4)
Membrane trafficking [BR:
ppug04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
119224556 (si:dkey-32e23.4)
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
119224556 (si:dkey-32e23.4)
RhoA-dependent endocytosis
119224556 (si:dkey-32e23.4)
Mitochondrial biogenesis [BR:
ppug03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Fission and Fusion factors
119224556 (si:dkey-32e23.4)
Retention of mitochondria
119224556 (si:dkey-32e23.4)
Exosome [BR:
ppug04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119224556 (si:dkey-32e23.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
MMR_HSR1
T3SS_needle_E
Motif
Other DBs
NCBI-GeneID:
119224556
NCBI-ProteinID:
XP_037337535
LinkDB
All DBs
Position
5:14851109..14857889
Genome browser
AA seq
673 aa
AA seq
DB search
METLIPTINRLQEVFLTVGAEVVQLPQIVVVGSQSSGKSSVLESLVGRDFLPRGSGIVTR
RPLVLQLVNVAPLQERLKNENGNGLKQNAQISYPGVKAEEWGTFLHCKNQIFTDFQEIRH
EIEAETERNSGDNKGISPEPIYLKIFSPKVLNLTLVDLPGITKVPVGDQPEDIEAQVQEM
ILSFISNPNCLILTVSPANSDLATSDALKLAREVDTDGRRTLLVVSKLDLMDAGTDALEV
LLGRVIPVRLGIIGVVNRSQHDINTQKSLEDSMRDEQAYLQRHYPSLASRSGSRFLAKTL
SRLLMHHIRDCLPELKTRVTMLSAQYQARLNGYGQPVEDHSATLLQIVTKFASDYCNTIE
GTARYIQTSELCGGARICYIFHETFGRTLQSIDPLGGLTELDILTAIRNATGPRPALFVP
EVSFELLVKRQIKRLEEPSMRCVELVHEELQRIIQHCSSYSTQELLRFPKLHDSIVEVVT
GLLRKRLPITNEMVHHLVSIELAYINTKHPDFTDAAQVSASVNSQQAEALDGGKRWKNEK
VAEERVPAAGFGSPSKGQSINLLDTAVPASRKLSAKEQRDCEIIQRLIKCYFLIVRKSIQ
DSVPKTVMHFLVNFVKEHLQSELVGQLYKQTLLQELLIESEDTAQQRTEVAQMLEALQKA
NNIISEIRETHLW
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggagactctgattcccaccatcaaccggctgcaggaggtcttcctcacagtgggtgcc
gaggtcgtacagctgccgcaaatagtcgtggttggatcacagagcagtggaaagagctct
gtgttggagagcctggtcggacgggatttcttgccccgaggatcaggaatagtcacaaga
cgacccctcgtgttgcaacttgttaatgttgcccctctgcaggagagactgaaaaacgaa
aatggaaatgggctaaaacaaaatgcccaaatcagctacccaggtgtcaaagctgaggaa
tggggaacatttctgcactgcaaaaaccagatctttacagattttcaggaaatccgtcac
gaaattgaagcagagactgaacgcaattcaggtgacaacaagggtatcagtcccgagcct
atatatttgaagattttctcccctaaagtgcttaatctcaccctggttgatttacctgga
atcactaaggttccggttggggaccagccagaggacattgaggcacaagtacaggagatg
atcttgtctttcatctccaatccaaactgcctcatcctcacagtgtccccagccaactcc
gacttggccacctcagacgctctcaaattggctcgtgaggttgatacagatggtcgtcga
acactgctggtggtcagtaagctggacctgatggatgcagggactgatgctctggaggtc
cttttgggtcgtgtcattccagtcagactgggcattatcggggtggttaacaggagccag
catgacatcaatacccagaagagccttgaggactcgatgagggacgagcaggcttacctt
cagcgccactacccctcgctcgcctcgcgctccggctcacgctttctggctaaaaccctc
agcaggctgctcatgcatcacatccgggattgcctgccggagctcaagacccgtgtgacc
atgctgagtgcccagtaccaggcgcgcctcaacggctatggccagccggtagaagaccac
agcgccaccctgctgcagattgtcaccaagttcgccagcgattactgcaacaccattgag
ggcacggccagatacatccagacctcagagctctgcgggggtgctcggatctgttacata
ttccatgagacctttgggcgcactttgcagtccattgaccccctgggaggattgactgag
cttgatatcctcaccgccatccgcaatgctactggtcctcgacccgcactttttgtgccc
gaggtgtcctttgagttgttggtgaagcggcaaattaagcgcctggaggagcccagcatg
cgttgtgtggaactggttcatgaagagctgcagaggatcatccagcattgctcctcctat
agcacacaggagctcctgcggtttcccaaactgcacgattccatcgtggaagttgtgact
ggattactgagaaagcgcttgccaatcactaatgaaatggtgcaccatttagtatcgata
gagcttgcttacatcaacaccaaacacccagacttcacggatgcggcgcaggtctctgca
tctgtcaacagtcagcaggcggaggccctcgatggaggaaagcgctggaagaacgagaag
gttgcggaggagagggtcccggctgcaggctttggcagtcccagcaaaggccagtccatt
aacctgctcgacacggcggtgcccgcatcacgaaagctcagcgcgaaggagcagagggac
tgcgagattatccagcgcctcatcaagtgctacttccttattgtccgcaaaagcatccaa
gacagtgtgccaaagacagtgatgcacttcctggtgaactttgtgaaagagcatctgcag
agtgagctggtgggtcagctttacaaacagaccctgctgcaggagctgctcattgagtca
gaggacacggcacagcagcgcaccgaggtggctcaaatgcttgaggcccttcaaaaagcc
aataacatcatctctgagatccgggagacacatctgtggtag
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