Pungitius pungitius (ninespine stickleback): 119224623
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Entry
119224623 CDS
T07626
Symbol
cux2b
Name
(RefSeq) homeobox protein cut-like 2
KO
K09313
homeobox protein cut-like
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119224623 (cux2b)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
119224623 (cux2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
Cob_adeno_trans
Motif
Other DBs
NCBI-GeneID:
119224623
NCBI-ProteinID:
XP_062418167
LinkDB
All DBs
Position
5:19307549..19329874
Genome browser
AA seq
1465 aa
AA seq
DB search
MAADQKALQAAHTLKPALSPFLFFVWTSCDCWVLLTDPAPVLEASHTLEERRQHLNSSAP
DSEALARQISGHWKKHLECLEKTEPSEDSPALSGPAVTEGSSPASSLMTPNSTPAPGAPG
SPQQNYQDRGEEEASANAGLADRLSEAEEKIKVLHSSLDAAQTELLDLRCKYNQEMTNKA
EEVNAIMANLEKANQRAEKAQREVERLKEQIASGQRATAGSCHPAESSSRGKSENGEVLP
SQLEAALLAKDREILRLLENIQRLQFTLQEVQETSSNQILELERQLAYKTEAIERLEAKL
QTQMDYEEIKTELSILKVMKMASTNGTLSQDSAKAAEAILLDKEAFLPSHKYLVDKARVL
HSIDDDRSEDAGREAGRPPGSRSSSSHGDGRASPSPGPPAPDATSAGHDPPRPFSASPCS
GERLSGDHVLHKQLLSPHFKKEALAAFPTALYAAKVALMSAAQGPAGPGSVDAGLPSDQS
ESGSSTAGDDDQVDTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRK
LTVKGKEPFIKMKQFLSDEQNILALRTIQVRQRGSITPRIRTPETGSDDAIRNILEQAKK
EIQSQRGGEGKSSLNSSSGRSSNGPGSSSDETIKNILDQARREMEAQQHTLMEMEACGRA
PSANSGPQVERLGPPERSRVPPPPVSIKQEEGGCVTVCMANAISSPQTPLSVLSPAAFVQ
NIIRKVKSEIGEVGSYFDQHWSHERGSMVISGVGSSLRFNSVSPALSSSSSGPSAPPRHW
ARPENGEGPPNSEEASAAEDEPGSGRPAEVKVESDTSVSGESPGPGPGRLSYYPAYVPRA
LKPTVPPLTPEQYEMYMYREVDTLELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDML
SRPKPWSKLTQKGREPFIRMQLWLLDQLGQSLSQPPSHGHALDKSPVTTHSSPSPPPSPA
ESHPSPLVEPVSLSLESSKENQQPESLGLGLGLGLPPHPDGRKSAPGLMVLHPPTNPLGI
QEIVAMSSELDTYAITKKVKEVLTDNNLGQRLFGETILGLTQGSVSDLLSRPKPWHKLSL
KGREPFVRMQLWLNDPHNVDKLRAMKKMEKKAYLKRRYGLLSTGSDSDSPGTRSECVSPA
LASLDLCPYSQAKKPRVVLGAEDKEALRKAYLLEPYPSQNTIEILASQLKLKTNTVINWF
HNYRSRMRREVLMEGLLDNDTDAEHHSYSPSATRSPRSDGEERRPQQLPGHVHAGVRLGA
SAALTRVKQEATDRQDGREAGDEDSVERSRAQRFAVAAQFPQLKSEREDPVAGGREPLSA
GRGLRQEAGLSSQAQGGPQRTVLSRREGEESGKSPVDPVSFKASSEPCRGSLEVSLNSPS
AASSPGLMMSFSPVPSSSAPISPSLPNPPSTSTNHSLDPSQLPPFQSPKLNRSTQRRNEK
MANLNNIIHRLERAANREETLEWEF
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgatcagaaggccctgcaggcagcgcacacactaaaaccagcgctttcgcct
tttttattttttgtatggacatcatgtgattgttgggttcttctcacagatccagcacct
gtgctggaggcctcgcacaccctggaagaaaggcggcagcacctcaacagctcggccccg
gacagcgaggctctggcgcggcagatcagcgggcactggaagaaacacctggagtgcctt
gaaaagacagagccgtcggaggacagccctgcgctctcagggccagcagtgaccgagggg
tccagccccgcgtcctccctgatgacgcccaacagcacgccggcccccggggccccaggc
tcccctcagcagaactaccaggaccgaggggaggaggaggcgagcgccaacgcgggcttg
gctgacagactatcagaggccgaggagaagatcaaggttctgcattcatctctggacgcc
gcgcagaccgagctgctggacctgcggtgtaaatacaaccaggagatgaccaacaaggcc
gaggaggtcaacgccatcatggcgaaccttgagaaagccaaccagagagcggagaaggcc
cagagggaggtggagaggctaaaggagcagatagccagtggccagagagccaccgcaggg
agctgccatccagcagagagctccagcagggggaagagcgagaacggcgaggtgttgccc
tcccagctggaggctgccttgctggctaaagaccgcgaaatcctccgacttctcgagaac
attcagcggctgcagttcacgcttcaggaagttcaggagacctcgtccaatcagatcctg
gagctggagcgccagctggcctacaagacagaagccatcgagagattggaagctaaattg
caaacccagatggattatgaggagattaaaactgaactcagtatactaaaggtcatgaag
atggcttcaaccaatggtaccttgtcacaggattccgccaaggctgccgaggctattttg
ctggataaagaggcctttcttccatctcacaaataccttgtggataaggccagagttttg
cacagcatcgatgacgaccgatccgaggacgcgggcagggaggcgggcaggccgcccggc
tcgcgctcgtcctcctctcacggggacggccgcgcctcccccagcccgggcccccccgcc
ccggacgccacctccgccggccacgacccaccccgcccgttttccgcgtcgccgtgctcc
ggagagcggctgtccggggaccacgtcctgcacaagcagctgctctcccctcacttcaaa
aaggaggccctggcggccttccccaccgccctgtacgcagccaaagtcgccctcatgtcg
gccgcccaggggcccgcggggccgggcagcgtcgacgccggcctgcccagcgaccagtcg
gagagcggcagctcgaccgcgggggacgacgaccaggtggacacggcggagatcgccttc
caggtgaaggagcagctgctgaagcacaacatcggccagcgcgtgttcggccactacgtg
ctgggcctctcgcagggctccgtcagtgagatcctggcgaggcccaaaccctggaggaag
ctgaccgtgaagggcaaagaacccttcattaagatgaagcagttcctctccgatgagcag
aacatcctggcgctccggaccatccaggtccggcagagagggagcatcactccgcgcatt
cgaactcctgaaactgggtcagacgacgccatcaggaatatcctggagcaggccaagaag
gagatccagtcgcagaggggaggtgaaggcaagtcgtctctgaacagctcctcgggcagg
agcagcaacgggcccggcagcagctccgacgaaaccatcaagaacatcctggatcaggcc
cggagggagatggaggcccagcagcacaccctgatggagatggaggcctgcggcagggcc
ccgtccgccaactcagggcctcaggtagagcgcctcggcccgcccgagcgctccagggtc
ccgcctccacccgtctccatcaaacaggaggagggcggctgcgtcacggtctgcatggcc
aacgccatcagcagcccccagacgcccctcagcgtcctctccccggccgcctttgtccag
aacatcatccgcaaggtcaagtcggagatcggtgaggtgggctcctactttgaccagcac
tggtcccacgagcgaggctccatggtgatcagcggcgtcgggagctcgttgcgcttcaac
tcggtctcccccgccttgtcctcgtcctcctccgggccctccgccccgccccggcactgg
gcccgcccggagaacggcgagggcccgcccaacagcgaggaggcgtccgccgccgaggac
gagccgggctcaggccggccggcggaggtgaaggtggagtcggacacgtcggtgagcggc
gagtcccccgggcccggccccgggaggctctcctactacccggcgtacgtcccccgcgcc
ctcaagcccaccgtgccgccgctgactccagagcagtacgagatgtacatgtaccgggag
gtggacacgctggagctgacccggcaggtgaaggagaagctggccaagaacggcatctgt
cagaggatctttggggaaaaggtcctgggtctttctcagggcagcgtgagcgacatgctg
tctcgccccaaaccctggagcaagctgacccagaaaggcagggagcccttcatccgcatg
cagctgtggctgctggaccagctgggccagagcctcagccagccgccgagccacggccac
gctctggataagagcccagtgacgacccattcctcgccctctcctcctcccagccctgca
gagagccacccgagtcctctggttgagcccgtcagcctctccctggagagcagcaaagag
aaccagcagcccgagagcctgggcctgggtctgggtctgggattgcccccccacccagat
ggaaggaaatccgcccccggcctcatggtcctgcacccgccgacgaacccactgggcatc
caagagatagtggccatgtcttcggagctagacacgtacgccatcaccaagaaggtcaaa
gaggtgctgacagacaacaacctaggccagcgtcttttcggggagaccatcctgggcctg
actcagggctcggtgtccgacctgctctccaggcccaagccctggcacaagctcagcctg
aaaggccgcgagccgtttgtccgcatgcagctgtggctcaacgatccccacaacgtcgac
aagctgagggccatgaaaaagatggagaagaaagcctatctgaaacgccgctacgggctg
ctgagcaccggctcggacagcgactcgcccggcactcgctccgagtgcgtgagcccggcg
ttggcgtcgctcgacctgtgcccctacagccaggccaagaagccccgggtggtgctgggg
gccgaggacaaagaggcgctgaggaaggcctacctcctggagccctacccctctcaaaac
accatcgagatcctggcctcccagctcaaactgaaaaccaacaccgtcatcaactggttc
cacaactacaggtccaggatgcggcgggaggtgctgatggagggtctgctggacaatgac
acagacgccgagcaccacagctactcgccctcggcgacgcggagcccccgctcggacggc
gaggagaggaggccgcagcagctcccgggacacgtccacgccggcgtgcgcctcggcgcc
agcgccgcgcttactcgcgtcaagcaggaggcgacggacaggcaggacgggagggaggcg
ggggacgaggactccgttgagcggtcgagagcccagcgcttcgccgtggcggcgcagttc
ccgcagttgaagagcgagcgcgaggacccggtcgccggcggccgcgagcccctctcggcc
ggccgcggcctgaggcaggaggcggggctgagcagccaggcccagggcggcccccagaga
accgtcctgtccaggcgcgagggggaagagtccgggaagtcacccgtggaccccgtcagc
ttcaaggcttcgtcggagccctgccgcggcagcctggaggtgtccctcaactcgccctcc
gccgcgtcctcccccggcctcatgatgtcattctcccccgtcccctcctcctcggctccc
atatcgccctcgctgcccaatccgccctcgacgagcaccaatcacagcctggaccctagc
cagctgcctcccttccaaagccccaaactcaacagaagcactcagagacgcaatgagaaa
atggccaacctgaataacatcatccacaggctagagagagccgccaatcgggaagaaacg
ctggaatgggagttttaa
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