Pungitius pungitius (ninespine stickleback): 119224639
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Entry
119224639 CDS
T07626
Symbol
rorb
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119224639 (rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ppug03310
]
119224639 (rorb)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
119224639 (rorb)
Nuclear receptors [BR:
ppug03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
119224639 (rorb)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
119224639
NCBI-ProteinID:
XP_037337698
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Position
5:15957344..15974910
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AA seq
472 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQARLLEQRQQQTGEAEALAR
VYSSSLTNGLSTLNHEIGGTYANGHVIELPKAGHGNGGGVQGGYYGMDSTQPSPDQSGLD
MSGMKHIKQEPVYDLTPVPNLFSYGGYQDSQLGPNNVSMGELDRIAQNIIKSHLETCQYT
TEELQQLAWQTHSYEEVKMYQSKPRDVLWQQCAIQITHAIQYVVEFAKRISGFMELCQND
QILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGCDDLVSAVFDFAKSLC
SLQLTEEEIALFSAAVLISTDRPWLMEPRKVQKLQEKIYFALQHIMQKNHMDEDALAKLI
SRIPTLSALCTLHTEELQAFQQLHPETVNVLFPPLYKELFNPDPNSAMAMPK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcccaaatcgaagtcataccttgcaaaatctgcggagacaaatcgtcaggtatc
cactacggagtcattacatgtgagggatgtaagggtttcttcagacggagtcagcagaac
aatgcatcctactcctgcccccgccagaggaactgcctcatcgacagaacaaaccgcaac
cgatgccaacactgccgcctgcagaagtgtctcgccctaggaatgtccagagatgctgtg
aagtttggtcgcatgtccaagaagcaacgcgacagcttatacgcagaggtccagaagcac
caagcgcggctgctggagcagcggcagcagcagacgggcgaagcggaggctctagcgcga
gtttactccagcagcctgaccaacggactgtccaccctcaaccacgagatcgggggcacc
tacgccaatggccacgtcattgagctgcccaaggctggccacggtaacggaggtggagtc
caagggggatactatgggatggattctacccagccgtctccagaccagtcgggtttggac
atgtcgggcatgaagcacattaagcaggagccggtgtacgacctgacgccagtgcctaac
ctgttcagctacggaggctaccaggacagtcagttgggacccaataacgtcagcatggga
gagctggaccgtattgctcagaatatcatcaagtcccacttggagacatgtcagtacaca
acagaggagctgcagcagttagcctggcagacacactcctacgaagaggtcaagatgtac
cagagcaagcctcgggacgtgttgtggcagcagtgtgccatccagatcacccacgcaatc
cagtacgtggtggagttcgccaagcgcatctcagggttcatggagctgtgccagaacgac
caaatcctgctgctcaagtcaggttgtttggaggtagtcttggtgcggatgtgcagggcg
ttcaaccctctcaacaacaccgtgctctttgaagggaagtacggaggcatgcagatgttc
aaagctctaggttgtgatgacttagtgagtgcagtgtttgactttgccaagagtttgtgt
tcactgcagctgacggaggaagagatcgctctgttctcagcagctgtactcatttccaca
gatcgaccgtggctaatggagcctcggaaagtccagaagctccaggagaagatctacttt
gctctgcagcacattatgcagaaaaaccacatggacgaagatgcattggcgaagctgatc
agccgaatcccgacgttgtcggccctgtgcacgctccacacggaggaactccaggccttc
cagcagctacacccagaaaccgtcaacgtcctcttccctccgctctacaaagaactcttc
aaccccgaccccaactccgccatggccatgcccaagtga
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