Pungitius pungitius (ninespine stickleback): 119224647
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Entry
119224647 CDS
T07626
Symbol
thbs4a
Name
(RefSeq) thrombospondin-4a
KO
K04659
thrombospondin 2/3/4/5
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04145
Phagosome
ppug04510
Focal adhesion
ppug04512
ECM-receptor interaction
ppug04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119224647 (thbs4a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119224647 (thbs4a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
119224647 (thbs4a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119224647 (thbs4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119224647 (thbs4a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppug04147
]
119224647 (thbs4a)
00536 Glycosaminoglycan binding proteins [BR:
ppug00536
]
119224647 (thbs4a)
Membrane trafficking [BR:
ppug04131
]
Endocytosis
Phagocytosis
Opsonins
119224647 (thbs4a)
Exosome [BR:
ppug04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119224647 (thbs4a)
Exosomal proteins of colorectal cancer cells
119224647 (thbs4a)
Exosomal proteins of bladder cancer cells
119224647 (thbs4a)
Glycosaminoglycan binding proteins [BR:
ppug00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119224647 (thbs4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
COMP
EGF_3
EGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
119224647
NCBI-ProteinID:
XP_037337722
LinkDB
All DBs
Position
5:complement(12369033..12376824)
Genome browser
AA seq
945 aa
AA seq
DB search
MMDVWARVAALSLALQQLVITVTAQGIIYDLLVSPDCLPDLLQGSLKNKGRDEAFLLSSF
RIHTKTPTSLYSVINPKDNSKYLEVSVQDKLSKVTMHYQRTDGRFVTTSFNHGSLADGQD
HHVMLHARGLQSGPPRLNIYVDCRLVHSLDDLPAAFGSLPPGPNRVALRTLQSSSKDELT
DLKLVIEDTIDNVATLQDCSVDQGESLQLLSIQGARTEHDQASMEELKSMFSEMKELLIK
QIKETTFLRNTITECLACGLGGNPTNTGPASQPLTQCPPGTCFRQNMCVLSESGGFQCTS
CPDGFTGDGVYCDDVDECKFNPCYPGVRCVNTAPGFRCEKCPLGYNGPEINGVGVSYAKS
RKQVCDDIDECLGPPKDGGCTENSHCYNTIGSFRCGECKTGFTGDQVGGCHGTRLCPNGQ
PSPCHTNGECVVERDGSISCVCGVGWAGNGYVCGKDTDIDAYPDNKLQCRDNNCKQDNCL
SVPNSGQEDADSDGLGDSCDNDADSDGIVNIDDNCWLVPNVDQKNSDKDLLGDACDNCRT
VENPSQRDTDQDGLGDECDDDMDGDGIKNILDNCQRVPNKGQEDRDTDGVGDACDSCPDV
PNPNQSDSDDDLVGDICDDNIDSDGDGHQNTKDNCPTLINSSQLDTDKDGMGDECDDDDD
GDGIMDDDDNCRLVANPDQKDTDDNNVGDACEGDFDKDSVIDVIDHCPENAEVSLTDFRA
YQTVVLDPEGDSQIDPNWVVLNQGMEIVQTMNSDPGLAVGYKAFSGVDFEGTFHVNTVTD
DDYTGFIFGYQDSSSFYVVMWKQTEQTYWQAAPFRAVAEPGIQLKVVKSKTGPGEYMRNS
LWHTGDTPNQVRLLWKDPRNVGWKDKVSYRWFLQHRPQVGYIRARFFEGSKLVADTDVII
DTSMRGGRLGVFCFSQENIIWSNLKYRCNDTIPADYKDLNAQNTE
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgtgtgggccagagtagcagctctgtctctggcgctgcaacagctggtgatt
actgtcacggctcaagggattatctacgacctgctggtgtctccagactgcctgccagac
ttgctacaaggaagcctgaagaacaaagggcgagatgaggcattcctcctctcttccttt
aggatccataccaagacccctacctctctctacagtgtcatcaaccccaaagacaacagc
aagtacctggaggtcagcgtgcaggacaaactgagcaaggtaaccatgcattaccagagg
acagacggcagatttgtcacaaccagtttcaaccacggttccctggcagatggccaagat
caccatgtgatgctacatgccaggggtctacagagcggtccacctcgcctcaacatctat
gtagactgcagactggtgcacagtttggatgatctgcctgctgcgtttgggtccctccct
cctggtcccaacagggtggcacttaggaccctgcagtcgagttccaaggatgaactgact
gacttgaagctggtcatagaagacacaatagacaatgtggcaactctgcaggactgcagt
gtggatcagggtgaatctcttcagctgctaagcatccagggagccaggacagaacacgac
caagcctccatggaggagctgaagagcatgttttctgagatgaaagagctgctcatcaag
cagattaaggagacaacttttttgaggaatacaatcacggagtgtcttgcctgtggtctg
gggggaaatccaactaacacgggtccagcaagtcagcctctgacccagtgtccacctggc
acctgtttcagacagaacatgtgcgtcctctcagagtcgggtggttttcagtgcacgtct
tgtcctgacgggtttacaggagacggggtgtactgtgacgatgttgatgagtgcaagttt
aatccatgttatcctggtgtccgctgtgtaaacactgcccctggttttcgctgtgagaaa
tgccctctgggttacaacgggccagagattaatggagtgggagtttcctacgctaagtcc
cgcaaacaggtctgtgacgatatagacgagtgtctgggcccgccgaaggatggaggttgc
actgaaaactcgcactgctacaacacgataggctccttccgctgcggagagtgtaaaact
ggcttcacaggtgaccaggtgggaggctgccatggaaccaggctttgccccaatggtcaa
cccagcccctgtcacacaaatggagagtgtgttgtggagagagacggcagcattagctgt
gtgtgtggcgtcggttgggcaggtaacggctatgtgtgtggaaaggacacagatattgat
gcatatcctgacaataagctccagtgccgtgacaacaactgtaagcaggataactgcctt
tctgtaccaaattctggccaagaggatgcagacagcgacgggttgggtgactcctgtgat
aacgatgcagacagcgatggcattgttaacatagatgacaactgctggctcgtacctaac
gtggaccagaagaacagtgataaggatctccttggcgacgcctgtgacaactgcagaaca
gttgaaaatccctcacagagggacaccgatcaggacgggctaggagacgaatgtgatgat
gatatggacggggacggcattaagaatatccttgacaactgccagcgagtccccaataaa
ggccaggaagacagagacacagatggggtgggagatgcctgtgacagctgtcctgacgta
cccaaccctaaccagtctgactcagacgatgaccttgtcggagacatctgtgacgacaac
atcgacagtgacggtgatggccaccagaacacaaaagacaattgtcccacgctcatcaac
tcctcccagctggacaccgacaaggatggaatgggagatgaatgtgatgatgacgatgat
ggcgatggcataatggacgatgacgataactgcagactagtcgccaacccagaccagaag
gacacagacgataacaatgttggagacgcatgcgaaggcgattttgacaaagacagcgtc
attgacgtaatcgaccactgcccagagaacgctgaggtcagcctgaccgacttcagagcc
tatcagaccgtagtgctggatccggagggggactctcagattgaccccaactgggtggtc
ctgaatcagggcatggagatagttcagaccatgaactctgaccctggccttgctgttggc
tacaaagctttcagtggggtcgactttgaggggacgttccacgttaacaccgtgaccgat
gacgactatactggtttcatcttcggctaccaggactcctcctccttctacgtggtgatg
tggaaacagacagaacaaacctactggcaggctgctcctttcagggctgttgccgaacca
ggaatacaactcaaggtagttaagtcaaagaccggtcctggtgagtatatgaggaactcc
ctgtggcacacaggagatacccctaatcaggtccgcctcctgtggaaggaccccaggaat
gttggctggaaggacaaggtgtcctaccgctggttcctgcagcacagaccacaggtcgga
tacatccgtgctcgcttcttcgagggctcaaaactggtggcggacacagacgtgataatt
gacacgagtatgaggggcggcagactgggtgtgttctgcttctctcaagaaaacatcatc
tggtccaatcttaagtatcgttgcaacgacactattcctgctgactacaaggatctcaat
gcccagaacacagagtga
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