Pungitius pungitius (ninespine stickleback): 119224729
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Entry
119224729 CDS
T07626
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
Organism
ppug
Pungitius pungitius (ninespine stickleback)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
119224729
NCBI-ProteinID:
XP_037337880
LinkDB
All DBs
Position
Unknown
AA seq
1498 aa
AA seq
DB search
MIPENRFMKSVLRNKRSLAERLRQSKNRNRINNQQHFFKMRPENESGSFPPIRFKALDYV
FETSTRLKVMMNLLGLPAPYLTGTSDRYPHRGQLPEGPYRTPWIRGKVISTCKLFVSGSV
LDDLGEKSQADISPERFLSEAKEDVEAIAGSDADSLKGPEQDDGFCFLKETRINNPCQES
FLKLTTDQMAPGGANKELLLREELLVADNLPHFRRHLPTLKAKLSRLRTLPVADPLLSLT
GDTIPEDAIFRPCASFEKPPDEFPTDLQTCPNVHEEFGKESLMKGQSLLLPVVVDTLSLS
HENSTALSSIFGPLNVAPEQLEEQLSVLDLLHKAFPSDGSAPVDVSRYEAAEEPGERCHA
KEGSAAPEGRVTLPTEMGLDVTMTPCLKTSLTRMRPSPRDLPREAASVAGGGSLVSARAR
GEMETALWKAEKHPTFVVGFLFAEPETDGPAVDFQPLSEARKAAKSEDRSSLIAGDGLQG
EAEAGAPPVHFTESLSPDRPPGTEEEKEDFTQLPPEREDGTSVPMTPHSKECEAAPFRAE
TSAGDTRLHNQPAGEGARTASLMPALVTSDKEGKPSTFSKADATASSKDEGADGRFLEGE
SRDDSETERDAAPGGEHRRCLPGTKRRLEKHLDPLTAFMMLRSQARLSEAAESSTSAPNV
EQQKTTSEHRQPPMAQTHRSDQRPTYMSSAVSAKATREQNEKQTGRSIHQNGQHSRVVEV
QATVSQQRAHGELLAFARPRMSSAGQLGLNFAARGDFSRLTPDRTHFLLKQQERALYAAE
LHGDHEELFKQAALIHVLVTFKEMLLKCDLGTALEYLTKAAEARAEQSLEHLLKRLRLIL
YLSHKSQESNLKLLELQKLLASWLQHTGGAQNAAEKMLVMISVDSDHIRSSILGGLSHVA
GAAVAAVRPEENQKKLNGASVVSSTCDSVCVVVHEQHVGPDFPWSSFSLVVEYDHPGQSP
WAAVCGERSISHLTFHTVVPEPDEPKAWRLLEDDVPYVLLVTEGLLDCPLLLQTLESGFD
IMVVERSHSPSLQMLGGTHHYAVITVDESTAIIIQEEEELCQERASERVVMRLAALSLQY
NYCWLILHCRESQGGGFSTEAFSNLVLVYSSLVLFAMKSEDLDIKVLIVSEVTEMAKWIS
QICFHSLMAGEKDPRSYLDRDWLTVNPSEEERCLVQFPCINPLVGQLMLRRAPSLRWLLG
ASLSQLMELLPEVPHKVLKLFSDTTSLYTGTVDHPEPPSAFTETHHQTQGPLCNPWTPTE
YVNSDLRQEAPISPRAELFSGDHDTGFLFGADHSFSDPDSAVRWGDPAFGLDLSSSLGAA
VVPLESVRTASGPWREEAPIFSGWGGRAGAAGRVVARADGDWAQRADGDWAQRAEGEWAQ
RAEGDWAQRAASDLGGPFEADPTYGVSGAYSAAFGDLWRPDGLSPPKQVAPWGLAPNGGE
TPTASASYGSRCWAGRERKRSGEAARLVGTVLTPLKKGRLSYEVVPGRSDGQTRLKLF
NT seq
4497 nt
NT seq
+upstream
nt +downstream
nt
atgataccagaaaaccgcttcatgaagagcgtcctccgcaataaacgatctttggctgaa
agacttcgtcagtcaaagaaccgaaatcgaatcaacaatcaacaacatttcttcaagatg
aggcccgaaaacgaaagcggttctttccctccaatcagatttaaagctctcgactatgtt
ttcgagacctccaccaggctgaaagtgatgatgaacttactgggcctgccggccccgtat
cttactgggaccagtgaccggtacccgcacaggggccagttacctgaaggcccctacagg
accccgtggatcagaggaaaggtgatctccacctgcaaactgtttgtcagtggctccgtg
ctcgatgacctgggagagaaaagccaagcagacatttcaccagaaagatttctgagtgag
gcaaaagaggacgtggaggcgatagcgggctctgatgccgactcactgaagggtccagag
caggacgatggcttctgctttttaaaagagacgcgcatcaacaatccgtgtcaggaatca
tttttgaagttgacaactgaccagatggcacctggaggcgcaaacaaagagctcctcctg
agagaagagctcctggttgccgataacctgccacacttcaggagacatttacccacgctg
aaagctaaactgtcccggctgaggacgcttcccgtggccgaccccctgctgagcttaacg
ggagacaccatccccgaggacgccatattcaggccctgtgcgtcttttgaaaaacctcct
gatgagttccccacggaccttcagacgtgtccaaacgttcacgaggagtttggtaaagag
tcattgatgaaaggacagtctcttttactgcctgttgtagtggacacgctgagtcttagc
catgaaaactccaccgccttatccagcatttttggtccacttaatgttgctcccgagcag
ctggaagagcaactttcagtcctggatctgcttcataaagctttcccctccgatggatcc
gcgccggttgacgtttcccgttatgaagcagcggaggagcccggcgagagatgccacgcg
aaggaaggctcggcggcgccagagggacgtgtgacgcttccaactgaaatggggctggac
gtgaccatgacgccgtgtctcaagacgagtctgacccgaatgcgtccgtccccgcgcgac
cttccacgggaggcggcgtcagtggccggcggcgggtctttggtgtcagcgagagctcgg
ggagagatggagacggccctctggaaggcggagaagcacccgaccttcgtggtgggcttt
ctattcgcagagcctgaaacagacggaccagctgtcgacttccagccgctgtctgaagcc
cggaaagccgcgaagtcagaggatcgaagctctctcatcgctggcgacggactgcagggg
gaggcggaggccggagccccgccggtgcatttcacagagagcttgagccccgaccgcccc
cccggcacggaggaggagaaggaggacttcacccagctgccccctgagcgcgaggacggc
acatctgtcccgatgacgcctcactcgaaggaatgtgaagcggctccttttcgggctgaa
acgtctgccggcgacactcggctccacaaccaacccgctggcgagggggctcgcaccgca
tccctgatgcccgcgctcgtcacaagcgacaaggaaggtaaaccctcgacattttctaaa
gccgatgccaccgccagctccaaagatgagggtgccgacgggaggtttttagaaggtgag
agccgagacgactcggagacggagcgggacgcggcgcccggcggagagcatcggagatgt
ctgccgggtacaaagcgtcggctggagaagcacctcgaccctctgaccgccttcatgatg
ctgagatctcaggctcggctttccgaagcagccgagagctcgacttcagcaccaaatgtc
gagcagcaaaaaacaacatcggagcatcgtcagcctcccatggcgcagactcacagatca
gatcagaggccgacgtatatgagcagcgccgtgtcagcaaaggccaccagagagcagaat
gaaaaacaaaccggccggtccatccatcagaacggacagcacagcagagtggtagaagtc
caagctacggtcagccagcagcgcgcccacggcgagctgctggccttcgctcggcctcgc
atgagctccgccgggcagctggggctcaacttcgccgcgcgaggagacttcagccgcctg
accccggaccgaacgcacttcctcctcaagcagcaggagcgggcgctctacgccgccgag
ctgcacggagatcacgaggagctgttcaaacaggcggctctgattcatgtgctggtgaca
tttaaggagatgctgctcaagtgtgacctcggcactgcattggagtacctgaccaaggcc
gctgaggcgcgtgcggagcagagtctggagcacctgctgaagaggctgcggctcatcctc
tacctcagtcacaagagccaggagtccaacctcaaactgctggagctgcagaagctgctg
gcctcatggctgcagcacacaggaggagcgcagaacgccgcggagaagatgctcgtcatg
atatccgtcgactctgaccacatcaggtcttcgatcctcggcgggctgagccacgtggcc
ggtgctgctgtggcagccgttcgtcccgaggagaaccagaaaaaactgaatggtgccagt
gtggttagcagcacgtgcgacagtgtgtgcgtcgtggtgcacgagcagcacgtcgggccc
gacttcccgtggagcagtttctccctcgtggtggagtacgaccacccgggtcagtcgcca
tgggccgcggtctgcggagagaggagcatcagtcacctcaccttccacaccgtcgtcccc
gagccggatgagccgaaagcctggaggctcctggaggacgatgtgccgtatgtgttgttg
gtcacagaggggcttctcgactgccccctgctgctgcagacactggagtcagggtttgat
ataatggtggtggagaggagccacagcccgtccctgcagatgctcggagggactcatcac
tacgctgtgatcacagtggatgaaagcaccgccatcatcatccaggaggaggaggaattg
tgtcaggagcgagccagtgagagagtagtgatgaggctggccgctctctctttgcaatac
aactactgttggctcatcctgcactgcagagagagccaaggaggagggttttccactgaa
gccttcagcaacttggtgttagtttattcgtccctggtgctgttcgccatgaagtctgag
gatctagacatcaaggtgctgattgtgtctgaggtgacggaaatggccaaatggatcagc
cagatctgcttccacagcctgatggccggggagaaggaccctcgcagctacctggacaga
gactggctgactgtgaatccttcagaggaggaaaggtgcctggtgcagttcccgtgtatc
aaccctctggtcggtcagctgatgcttaggagagcgccgtcgctccggtggctcctgggg
gcctctctgtcccagctgatggagctgctcccagaggtgccgcataaagtcctcaagctg
tttagtgacaccacgtccctgtacaccggcaccgtggaccatccggagcctccgagcgcc
ttcactgagacacaccaccagacacagggtccactctgcaacccctggacacccacggag
tatgtgaactctgacctccggcaagaggcccccatcagcccccgtgcagaactattcagc
ggcgaccacgacaccggcttcctgttcggagccgaccacagcttcagcgacccagactcg
gcggtgcggtggggcgacccggccttcggactcgacctgagctcctccctcggcgccgca
gttgttcccctcgagagcgtccggaccgccagcggcccgtggagagaggaggcgcctatt
ttttccggctggggcggcagagccggagcggcggggagagtcgtggcgagagccgatggc
gactgggcccagagagccgatggcgactgggcccagagagccgagggcgagtgggcccag
agagccgagggcgactgggcccagagagccgcgtcggatctcggcggtcctttcgaggcg
gatcccacgtacggggtgagcggcgcttactccgcggccttcggtgacctatggcgtccg
gacggcctgagccccccgaagcaggtcgcgccgtgggggctggctccaaacggcggggag
acgccgaccgcttcggccagctacggctccaggtgctgggcggggcgagagaggaagagg
agcggcgaggcggcccgtttggttggaacagtgttgacgccactgaagaaggggaggttg
agctatgaggttgtgcccggcagaagtgatggacagacgaggctgaaattattttag
DBGET
integrated database retrieval system
