Pungitius pungitius (ninespine stickleback): 119224731
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Entry
119224731 CDS
T07626
Symbol
poli
Name
(RefSeq) DNA polymerase iota isoform X1
KO
K03510
DNA polymerase iota [EC:
2.7.7.7
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
119224731 (poli)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppug03400
]
119224731 (poli)
Enzymes [BR:
ppug01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
119224731 (poli)
DNA repair and recombination proteins [BR:
ppug03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
119224731 (poli)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
UBM
IMS_HHH_1
Cdd1
IMS_HHH
DNA_pol_lambd_f
Motif
Other DBs
NCBI-GeneID:
119224731
NCBI-ProteinID:
XP_037337884
LinkDB
All DBs
Position
5:complement(20290518..20295846)
Genome browser
AA seq
687 aa
AA seq
DB search
MDNSGDDTGEDETEWNNSYVDSVPLRPAAASVSDASLNRTSGATPGERVILHFDLDCFYA
QVEMLRNPALRDVPLGIQQKYIIVTCNYVARGHGVTKLMSVTDAKQKCPQLVLVKGEDLT
HYRDISYKLTELLVSFCPLVERLGFDENFMDITKMVERRLAETPASNRFSFKGHVYNHIS
ADATKASDHPRLALGSHVAAELRDAIHGKLGLTGCAGIATSKLLAKLVSGAFKPNQQTTL
LPENVGDIMGSLSGLRQVPGVGHQTAKRLQALGMVGVKDLQLFPLNDLAKEFGGPAARRL
RSLALGVDDSPVAPTGAPQSLSDEDSFKKMSTTREVSEKIQELLSSLTERMHKDGRQPQT
LRLTVRRYSATNKWFGRESRQCPIPNHVGQKIPSGGGDGVAVRQLVALAMKLFHKMVDCS
AAFHLTLINVCFSNLQARGAAAGGRGSITSFFTQSSPPKGTDIFSPQSQEASSRSGDSDH
QLSAQRSITQPTPPHKAGPTEIPRGSGADFQGLKRKQRPVVASKKPPLAKESRGTAGSGP
KVAVARPLPPNVDAEVFGLLPEEIQRELLSHAGPLPRAPSDPRNQSAQSAGPTAADHEAE
ASGAFPAGDVAEDGRPPAPRPPDCEFPGGVDAEVFSQLPADVRRELMSEWRRRRPVLKTP
SSRRPADRKAARKGSQGNNLLKYFKRS
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggataacagcggtgatgacacgggagaggatgaaactgagtggaataacagttacgtg
gattccgtcccgctcagacccgccgcagcttccgtttcagatgcaagcctcaacagaaca
tcaggagcaacacctggtgaaagagtcatcctgcatttcgacctggactgcttctacgct
caggtggaaatgctcagaaaccctgcactgagagatgtccctttaggtattcagcagaaa
tacatcatagtgacctgcaactatgtggcaagaggtcacggggtcaccaagctgatgtca
gtgactgatgcaaagcagaaatgtcctcagctggtgctggttaaaggagaagacctgaca
cactacagagacatttcgtataaactgacagagctgctggtttccttctgtccactggta
gagcggctgggatttgatgaaaacttcatggacatcacaaagatggtagaaagaaggcta
gcggagacgccggcgtccaaccgcttttccttcaaaggacacgtgtacaaccacataagt
gcagacgccaccaaagcgagcgaccacccgaggttggctttaggttcgcacgttgcagcg
gagctgagggacgccatccacggcaaactgggtctgaccggctgcgcgggcatcgccacc
agcaagctgctggccaaactggtgtcgggcgccttcaaacccaaccagcaaaccaccctg
ctgcctgagaacgtcggtgacatcatgggctccctgagcggcctgcgccaagtaccgggg
gttggtcaccaaacagcgaagcgacttcaagccctgggaatggtcggcgttaaagacctt
cagctcttcccgttgaacgacttggcgaaggagttcggaggtcccgctgcccggcgcttg
aggagtctggccctcggcgtcgatgactcgcccgtcgcccccaccggggccccacagtct
ctcagtgacgaagactccttcaagaaaatgtcaacaaccagagaagtttcggaaaagatc
caagagctcctgagtagtctgacggagaggatgcacaaagatggcaggcagcctcaaacc
ctccggctgaccgtccgcagatactcggcaaccaacaagtggttcgggcgggagagccga
cagtgtcccattcccaaccacgtgggtcagaagatcccctccggcggcggtgacggcgtt
gcggtccggcagctggtcgcgttggccatgaagctcttccacaagatggtggactgcagc
gccgccttccacctcactctcatcaacgtttgcttcagcaacctgcaggccaggggagcg
gcggccggcggaaggggctccataacgtctttctttacgcagagctcgcctcccaaagga
acggatatcttctcaccgcaaagtcaggaggcctcctctcggagtggggatagcgatcat
cagctcagcgctcagcgctcgattactcaaccgaccccgccgcacaaagcgggacccaca
gaaatccctcgtggctccggggcagattttcaagggcttaaaagaaaacagaggcctgtt
gttgcttcaaagaagcccccgcttgcgaaagagtcgcgcggcacagcggggtcgggccca
aaggtcgccgtggcgcgtccgttgcccccgaacgtcgacgccgaggtgttcggcctcctc
cccgaggagatccagcgggagctgctgtcccacgccggccctcttccacgggcacccagc
gacccccggaaccaatcggcccaaagcgccggcccgaccgccgcggatcacgaggccgag
gcctcgggggcttttccggcgggggacgtcgcggaggacgggaggccgccggcccctcgg
cctcctgactgcgagttcccgggaggcgtcgacgccgaggtgttttcacagctcccggca
gacgtccggagggagttgatgtccgagtggcggcgacggaggccggtcctgaagacgccg
tcgtccaggaggcccgcagacaggaaggccgcaaggaaaggcagccagggaaacaatttg
ttgaagtattttaaacgcagttag
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