Pungitius pungitius (ninespine stickleback): 119224742
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Entry
119224742 CDS
T07626
Name
(RefSeq) rho guanine nucleotide exchange factor 28-like isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119224742
Membrane trafficking [BR:
ppug04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
119224742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
C1_1
PH
Ank_2
Ank
PH_13
SOS1_NGEF_PH
C1_2
Bac_globin
Motif
Other DBs
NCBI-GeneID:
119224742
NCBI-ProteinID:
XP_037337909
LinkDB
All DBs
Position
5:complement(6893594..6931028)
Genome browser
AA seq
1836 aa
AA seq
DB search
MSSVIVSGSEGNGRITKAVTRTRMGLHGCHFSSCLSPVTVFNVHRCPKMELSRRRVPLYG
QAKVFALLEGYDSVPEDAEVYIVLEGSTLVHVTRAHSDVMLCFIVPGHNLAEVVSVQAYL
SSGTTHVTWVGGASLEYVQDDAQDLAEHLVIHAHCLSCEDHKELSSLFNLGQESSRGAMD
RRVALAVANLDIPRSWNVLGSHGRDERTPRESPLHLAVRWGLFQLAELLLCQPGGLMAVS
LPNQEGVTPLQLAQTAANTEILELLAHPPNPLATPPAGLSQVWADRSRLLRFCHDSGNLT
LTVRQNLRWSSEESRHADILLLRERLRDQDFLREIKALRRERVSGKEGPVENARDNAAYS
DIHRAALEETDHEEPLMFCLNEEDEDEDAPSLCDSGQTQSTRESQAPSPTLAAAVRLSAM
IHGKGRVYANAMLVDQVDDADIKYRPPEEEDEEEEEVSPAPRLGRPCWGSFSTTPPASGN
HSQNRHPSSPRGGEKGIRVPEKEPSPRTSPPATLMSSPSFPSSPLASAFRLFEGGQRRQT
QPSLPVSPALNRRGCSLTEASQGLSPSLECDSGEEDILGHSYPCSSVKKQSVLRSSPREE
RDSLETSPDFNRLHSPPVKSPEEAEVRLRSYSFSSPKAKPSPLLNQDAAITDQAEEQRAF
TLTETTREKRRLGFRKRAQSAEEESSASLQHLTLTEFLKEIEDEEWDKYIIPSKVESEKY
KVSRTFSFLKSRMSSTRNKTKVKGKEAKEGKEKAGVANGHQFVSAPPPGAALCVGCDRPV
SGKELLQCSNCFLNVHKSCRESVAACGKKPQERNALLLKSKTMSLPHNSVKDNSPSTFCS
SASLPTTTREKRETIGPLSKSFSISIDSRRLSDAAAPGGEGAVTAWTNGVLADEGTPVTA
TPTSTELPTATHDGVDAPLMSGLSAEELGLDVESWSLAVSPEFCLQHDRHTIKRQEVIYE
LMQTELHHIQTLTVMSGVFRRGMLEELQLDWDCVARIFPCLDPLLLFHKNLFGALLERRQ
AAAHTDTPGNYLIHQIGDILLEQFSDEYAEEMKQVYGEFCSHHTEAVNVFKELQQQNKKL
QNFVKQQSNNTLVRRREVPEFILLVTQRITKYPVLLERILHYTREESQEHYDLSRALAQI
RDIIAAVDLTVNRHERFQELQEVLVRLENKSFAKLKNDKVFRKQDLHSQHRVLQYKGLVY
WKTATGRLKDTLALLLTDVLVFLQEKDQRFVFAAVDQKPPVIPLQKLIVREVANEERGMF
LISASSVGPEMYEVHTNTRDERNAWMRHIRQAVESCPEEEEEEEERTAEIEESRRVAEVR
VQKIAKFQETLSGQDQLICNSLEEKLQLYAELTQFTLSSPEPCAQRHLLVPTDPRGETPR
QVSALLTAALREAENLISILQSGDGLTVKSDGSPARGPECCGYDSRGSSVHESPSEPDYL
STLSISSASPGSDGELAGLDGAPWSPAVELRRRDAKGTLLKVAESVQSLTQLLYSLQAAV
TVQDSCYEVQRLLLLEGERPQLHLEQDKQKSVDKKKEEVEKRGLERKKEEVDEVQKLHVK
LKQVQQRWDKECLARDKRQCQQESVLEQREQRCLLEAERLRCEREELEAQLLEYQQSLER
LREGQRSVEKEKEKIDAQQRLLQRWRHHRQSSLPVTIPLDGYKVSGHSRSGSLDGNLSVY
ENKATMLASLQQSHPPRRRPADDNQQQHLLSAVSGQNCGANLGLSASLYNSLNTLLSQAH
SKPPPDGRMCPRPRNDLPRALSGRISTQQQGTNSDFSVPLDRRSPGPWRSEVTGHRLYED
GYSTSPSLTPLLPPHAYLSLEGENGEEACEENIVYL
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atgagttctgtaatcgtttcaggatcagaagggaacggcagaataaccaaagcagtcacg
aggactcgcatggggctacacggatgtcacttctcctcgtgtctctctccagtgactgtc
tttaatgtccacaggtgcccgaagatggagctgagcaggaggagggtacccctgtatggc
caggcgaaggtgtttgcattgctggagggttacgactcggtgccggaggatgccgaggtg
tacatcgttctggaagggtccacgctggtgcatgtcaccagggctcacagtgatgtcatg
ctgtgctttatagtaccgggacacaacctggcagaagtggtctctgtccaggcatacctg
tcctctggaaccacacatgtcacctgggtgggcggagcttccctggagtatgtccaggat
gacgctcaggacctagcagagcatctggtaatacatgcacactgcctcagctgtgaggat
cacaaagagctgagcagcctcttcaacctgggccaggagagctctcgcggggctatggat
cgccgcgttgccttggccgtggccaacctggacatcccccgcagctggaacgtgttggga
agccacgggagagacgagcgaacccccagggagtcgcccctccacctggccgtgcggtgg
ggtctgtttcagctggcagagctgctgctgtgtcagccggggggtctgatggcggttagt
ctgccaaaccaagagggagtcacgccgctgcagctggcacagacggcggctaacacggag
atcctggagctgctcgcacacccgcccaaccctctggcaacacctccagcaggtctgtct
caggtgtgggcagaccggtcccgcttgctgaggttctgccacgattcgggcaacctgact
ctgactgtgcgccagaaccttcggtggagctcggaggagagtcggcacgccgacatcctg
cttctcagggagcggctcagggaccaggacttcctcagagagatcaaagctctaaggagg
gagcgcgtctcagggaaggaagggccggtggagaatgccagagacaacgcagcgtattct
gatatccacagagcagctctcgaggaaactgaccacgaggagccgctgatgttttgctta
aacgaagaggacgaggatgaggacgccccatcgctgtgtgactccggacaaacgcagtcc
acaagggagagccaggccccgtccccaacgctggctgctgctgtacgactctcagcgatg
atccacggcaaaggccgagtgtacgccaacgccatgctggtggaccaggtggatgacgca
gatattaaataccggcctccggaggaggaggatgaggaggaggaggaggtgagccctgcg
ccccgacttggccgcccatgctggggctccttctccacgactcccccggcctcggggaac
cattcccagaaccgccacccgtcctcaccccgcggcggcgagaaggggatccgagtccca
gagaaggagccttcccctcgcacgtctccccccgctaccctcatgtcctccccgtctttt
ccttcctcccccctggcgtccgccttccgcttgtttgagggagggcagaggcgtcagacg
cagcccagcctgccagtttctcctgctttgaaccgcagaggatgcagcttgaccgaggcg
agccagggcctgagtcctagcctggagtgcgatagtggagaggaagacatactgggacac
tcctacccctgctcgtccgtgaagaagcagtccgtcctgcgatccagccccagagaggag
agggactctctcgagacgtcaccagactttaaccgcctgcactccccccccgtcaagagc
ccggaggaagccgaggtccgcctgcgctcttactctttttcctcccccaaggccaagcca
tcgccgctgctgaatcaggacgccgccatcaccgaccaggcagaagagcagagggccttc
accctgactgagaccaccagagaaaagaggcgtttgggtttccgtaagcgggcccagtca
gcggaggaggagagcagtgcatcgctccaacacctcaccctcacagagttcctcaaagag
atcgaggacgaggagtgggataagtacataatcccctccaaggtcgagtcggagaagtac
aaagtcagccggaccttcagcttcctcaagagcaggatgtccagcacccgcaacaagacc
aaggtgaaggggaaagaggcaaaggaggggaaggagaaggcgggagtcgctaacggacac
cagtttgtctcggcgcccccccctggtgccgctctgtgtgtgggctgcgacaggcctgtt
tctgggaaggagctgctgcagtgctccaactgtttcctcaatgtgcacaaaagctgtcga
gagtctgtggcagcatgcggcaagaagccgcaggagaggaatgcgttgctgctgaaaagc
aagaccatgtctctcccacacaactctgtgaaagacaactctccgtccacattctgctcc
tcagcttcactgcctacgacgaccagggagaagagagaaaccatcggccctctctccaaa
agcttctccatctcgatagacagcaggcggctgagcgacgcagcggcgccgggcggggag
ggcgccgtcacggcttggactaacggcgtgctggctgatgagggaacgccggtcacggcg
acgccaacatccaccgagctgccaaccgccacacacgatggcgtggacgctcccctgatg
agcggcctgtccgctgaggagctgggcctggacgtggagtcctggagtctggcggtcagc
cccgagttctgcctgcagcacgacaggcacaccatcaagcgacaggaagtcatttacgag
ctgatgcagacggagctgcaccacatccagaccctgacggtcatgtcgggggtgttccgg
agaggcatgctggaagagctgcagctcgactgggactgtgtggctcggatcttcccctgc
ttggaccccctgcttctctttcacaagaacctcttcggagcgctgctggagcgccgacag
gccgccgcccacaccgacacccccggcaattacctcatccaccagattggagacattctg
ctagagcagttctcagacgaatacgccgaggagatgaagcaggtgtacggagagttctgc
agccatcacaccgaggccgtcaatgtcttcaaagagctccagcaacagaacaaaaaactg
caaaactttgtcaaacaacagagcaacaacactctggtgaggcggagagaggtgccagag
ttcatcctgctggtcactcagcgcatcaccaagtacccggtgctgctggagaggatacta
cattacactcgtgaggaaagtcaggaacactatgacctgtcgagggccctggcccagatc
cgtgacatcattgccgcggtggacctgacggtgaataggcacgagaggtttcaggaactc
caggaagtgctggtgcggctggagaacaagagtttcgccaagctaaagaacgacaaggtg
ttccgcaaacaggacctgcacagccagcacagggttctgcagtataaagggctggtctac
tggaagaccgccacgggacggctgaaagacactctggctctcctgctcacagacgttcta
gtcttcctacaagagaaggatcaacgcttcgtgtttgctgcggtggaccagaagccgccc
gtaatccctttgcaaaagctcattgttcgagaagtagccaacgaggagagagggatgttc
ctcatctccgcctcctcggtggggccggagatgtatgaagtccacaccaacacccgagac
gagaggaacgcgtggatgagacacatacgacaagctgtggagagttgtcctgaggaagag
gaggaggaggaggagcgaactgccgagatagaggagtccaggcgagtggcagaggtcaga
gttcagaagatcgccaagttccaagagacgctgtcgggtcaagaccagctaatctgcaac
agcctggaggagaagttacagctctatgccgagctcacgcagtttaccctcagctctcca
gaaccctgtgcacagcgccacctgctggtgccgacggacccacgcggcgagacgccgcga
caggtctctgcgctgctcacagcagcgctcagggaagcggagaacctgatctccattctg
caaagtggggatggccttaccgtaaagagtgacggctccccggcccgaggaccggagtgc
tgcggctacgacagccgggggagcagcgtacacgagtctccatcggagccggattacctg
agcactctcagcataagctccgcctctcctggatcagacggcgagctggcggggctggac
ggcgcgccgtggagcccggctgtcgagctgagaagaagagacgccaaagggacgctgttg
aaggtggcagagagcgttcagagtctgactcagctcctctacagtctgcaggctgccgtg
accgtccaggacagctgctatgaagtccagaggctcctcctcctggagggagaaagacct
cagctccatctggagcaggataagcagaagagtgtcgataagaagaaagaggaagtagag
aagaggggtttagagaggaagaaggaggaagtggatgaggtccagaagctccacgtgaag
ctcaaacaggtgcagcaacgttgggacaaagagtgtctggccagagacaaacgacagtgc
cagcaggagagtgtgctggagcagcgggagcagcggtgcctcctagaggccgagcggctg
cgctgcgagcgtgaggagctcgaggctcagctgctggagtaccagcagagcctggagcga
ctgagggagggccagaggagcgtggagaaggagaaggagaagatcgacgcccagcagagg
ctgctgcagcgctggagacaccaccggcagagcagcctgcctgtgaccataccgctggat
gggtacaaggtgtccggccacagccgctcgggcagcctggacggcaacctttctgtgtac
gagaacaaggccaccatgctcgcatccctccagcagagtcatcccccccgccgccgcccc
gctgacgacaaccagcagcagcatctgctctctgccgtgtcaggacagaactgcggcgct
aacctgggcctgagcgccagcctgtacaacagcctcaacaccctgctgagccaggcgcac
agcaagccgcctccggatggtcgcatgtgcccccggcctcggaacgacctccctcgggcc
ctcagcggcaggatcagcacccagcagcaagggaccaacagcgacttcagcgtgccgttg
gacaggcgctccccgggtccctggaggtcagaggtcaccggccacagactctatgaggat
ggctactccacgtctccgtctctcacacccctcctccccccccacgcctacctctctctg
gaaggagagaacggggaggaggcatgcgaggagaacattgtttacctctaa
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