Pungitius pungitius (ninespine stickleback): 119224754
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Entry
119224754 CDS
T07626
Symbol
neo1a
Name
(RefSeq) LOW QUALITY PROTEIN: neogenin 1a
KO
K06766
neogenin
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04350
TGF-beta signaling pathway
ppug04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119224754 (neo1a)
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
119224754 (neo1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppug04515
]
119224754 (neo1a)
Cell adhesion molecules [BR:
ppug04515
]
Immunoglobulin superfamily
DCC/UNC5 family
119224754 (neo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
Interfer-bind
Ig_RIMBP2
Herpes_UL74
Motif
Other DBs
NCBI-GeneID:
119224754
NCBI-ProteinID:
XP_062418005
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All DBs
Position
4:21752991..21771632
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AA seq
814 aa
AA seq
DB search
MTDDAEAEASRCGGSPPPLSGQNGEITSYKIRYRKGSRRSEAAETTAGTQLVKLIDGLER
GTEYSFRVSAMTVNGTGPATDWTTAETFESDLDESRVPDQPSSLHVRPLVNSIVVSWTPP
ENQDIVVRGYGIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPV
YESAITRPQSVPDPSPMMPPVGVQASVLSHDTIKVTWADNSLPKNQKITDNRFYAVRWKT
NIPANTKVKTANATSLSHMVTGLKPNTLYEFSVMVTKGRRSSTWSMTAQGTTFETIPSSS
PKDVTVVSKENKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEVHDWVIEPVVGNRLTH
QIQDLTLDTTYYFKIQARNSKGMGPMSEAVHFRTPKTESSDKMANDQASNLPPKPGPPGN
FHPQDPRTAVGVGGNGESHILVIVIIISVGAFTIIVVVVGAFLCTRRTHVPPEEKAGRPP
SRPNGSHKYKGNSKDLKPPDLWIHHERLELKPMDKSPDPNPVMTETPIPRTSQDITPADA
GLDGNPHLQQRRNSYRGHESEDSMSALAGRRGMRPKMMMPFDAQPPQPVISAHPIHSLDN
HHHYYHMGSAASPTRSYLYHQGGGHPRPHACATPVSHLERVESTESVRNAPSRSPSQQQP
PSSQVSCPSEIMVDPEGSYHGSTTTEEEASYSGNLPPHRSAHPHAHAHPLKSFGVPAVAA
AGHPAYESPALPSTPLLAQTGPPTHPHVVKTASIGTLGRTRTPMVVTVPNAPDVPETSKM
LEDVDSSYEPDELTEEMAHLEGLMKDLNAITTAP
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgatgccgaagccgaagcatcacgctgcggtggcagccccccgcccctcagc
ggccagaacggggagatcaccagctacaagatccgataccgcaaaggatcccgccggagc
gaagctgccgagaccaccgcggggacccagctcgtcaagctcatcgacggtctggagcgc
ggcacggagtactccttccgggtgtcggccatgacggtgaacggcaccggaccggccacc
gattggaccacggcagagaccttcgagagcgacctggacgagtcccgcgtaccggaccag
cccagctcgctccacgtgcgcccgctggtcaacagcatcgtggtgagctggacgccgccg
gagaaccaggacatcgtggtgcgcggctacggcatcggctacggcatcgggagcccccac
gcgcagaccatcaaggtggactacaagcagcgctactacaccatcgagaacctcgacccc
agctcccactacgtgatcaccctgaaggccttcaacaacgtgggcgaggggattcccgtg
tacgagagcgccatcacccgcccgcagtccgtaccagacccctcccccatgatgccgccc
gtgggcgttcaggcctccgtgctgagccacgacaccatcaaggtgacctgggccgacaac
tcgctgcccaagaaccagaagatcaccgacaaccgcttctacgccgtccgctggaagacc
aacatccccgccaacaccaaggtcaagacggccaacgccaccagcctgagccacatggtg
accggcctgaagcccaacacgctctacgagttctccgtcatggtcaccaaagggcggcgc
tccagcacgtggagcatgacggcacagggcaccacctttgaaaccatcccaagctcgtcc
ccgaaggacgtgaccgtggtgagcaaagagaacaagcctcgcaccataatagtcaactgg
cagcctccctctgaagccaatgggaagatcaccggctacatcatctactacagtacagac
gtcaacgccgaggtccacgactgggtcatcgaaccggtggtgggcaaccggctgacccac
cagatccaggacctgacgctggacaccacctactacttcaagatccaggcccgcaactcc
aagggcatgggccccatgtcggaggccgtccacttccgcaccccaaagactgagtcctct
gacaaaatggctaacgaccaagcctcaaatcttccacccaaaccggggcctccagggaac
ttccatccacaggaccccagaacagctgtcggcgtcggaggcaacggcgaaagtcacatc
ctggtcatcgtcatcatcatctccgtgggagccttcaccatcatcgtggtggtggtcggg
gccttcctgtgcacgcggcgcacccacgtcccaccagaagaaaaagcggggcggcctcca
agtcgtccaaacggctcgcacaagtacaaggggaactccaaagacctgaagcccccggac
ctgtggatccaccacgagcggctggagctgaagcccatggacaagtcgccggaccccaac
ccggtgatgaccgagacgcccattccccgcacctcgcaggacatcacgccggccgacgcc
ggcctggacggcaacccccacctgcagcagcgccgcaactcctaccgcggccacgagtca
gaggacagcatgtcggcactagcaggccgacgagggatgaggcctaaaatgatgatgcct
tttgacgcgcagccgccccagcccgtgattagcgctcaccccatccattccctcgataac
catcaccactattatcacatgggcagcgcggcgtcgccgacgcgcagctacctctaccac
cagggcggcgggcacccgcgcccgcacgcctgcgccacccccgtctcccatctagaaagg
gtggagtccacagagtcggtgaggaatgccccatctcggagcccctcccagcagcagcca
ccatcctcccaggtgtcctgcccctcggagatcatggtcgacccggagggcagctaccac
ggctccaccaccaccgaggaggaggccagctactccggcaacctgcccccccaccgctcg
gcccacccgcacgcccacgcccacccgctcaagagcttcggcgtgcccgccgtcgcggcc
gccggccatccggcgtacgagtcgcccgccctgcccagcacccccctgctggctcagacc
gggccccccactcacccccatgttgttaaaacagcctctatcggaaccctagggaggaca
cggacaccgatggtggtcacggtgcccaacgcccccgacgtgcccgagaccagcaagatg
ctggaggatgtcgacagcagctacgagcccgacgagctgaccgaggagatggcccacctc
gagggcctcatgaaggacctgaacgccatcactacagcgccataa
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