Pungitius pungitius (ninespine stickleback): 119224790
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Entry
119224790 CDS
T07626
Symbol
clip1a
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
119224790 (clip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppug03036
]
119224790 (clip1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppug04812
]
119224790 (clip1a)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
119224790 (clip1a)
Cytoskeleton proteins [BR:
ppug04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
119224790 (clip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
DUF4763
Nuc_N
Motif
Other DBs
NCBI-GeneID:
119224790
NCBI-ProteinID:
XP_062418120
LinkDB
All DBs
Position
5:276341..297198
Genome browser
AA seq
2197 aa
AA seq
DB search
MSTAKPSGIKGPSKIGRPPGTGAPKTNPSTAKANAVDKSDARVGGGDAEQSFQVGDRVWV
NGNKPGHIRFLGDAQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEALRGIFTRPSKLSL
TEGEANGTQTAPPSRAASPTPSVGSVSSHTPATKSALPSTTKKASSAAPAAPATPATPPS
NLARTNSESVSNLSETGSVKKGERELKMGDRVLVGGTKAGVVRFLGETDFAKGEWCGVEL
DEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTRIGFPSTTPAKAKTTVRKAAATPSGLK
RSPSASSISTMSSVASSVSAKPSRTGLLTETSSRYNRKISGTTALQEALKEKQQHIEQLM
AERDMERAEVARATGHVGEVEQEIGLLRDEQEQMETKMDQLRALVEAADKDKVDLLNQLE
EERRKVEDLQFRVEEACITKGDLETQTRLEHAHIKELEQSLLFEKTKAEKLQRELEDHRV
ATVSERSRIMDLEKDLSLRSREVADLQLRLGTQQGSEDATSPLSPLLEEITSLRDQLASQ
EVKQQEELTKYKEKMEAQEKAHSEAAARLQATSVSLSGDNEQLQMRISQAEKENADIVDS
WRSKLESVVASHQQALEGLKGSFSNGADAQTKELIETKSELERLKIEQNFAVEEARVKHE
AAAQEAQALKAQLGSLIEEKERLEESLRSSVEKAEEQHLVEMEEVLGKLHNAEVKVNELE
EKEAMLAQQAQDKERETKEQISEMAALRSQVAQGNQELVTLKSQLELVQSQGNNQGAQVN
ALSSQLEGRQQEVLSLQKSLTTLQQEKEALEQELGGLKQKLADNTEEQTISSNTMQETLE
KLSKKDEQCTSLKSQSESLRSQLAGLERKLKAADEKLEQLSKDKCKLENDMSDMMKTSGD
SSVQLTKMNDDLKQKERRLEELQSQLSEEKEKVAHSNEQLQQERSCREQELMETRDAHQS
QIRGLQETIANMEKSVKQGETLVVQLKASQEKSISQVSELHVEEVEVLQSQVNKLKQDLS
SSKDKNLELEKMVSELQEYKERAQCLSAELDSHKHDVEHLNNQLEKQSLELEITCKEREE
VKGEKGKLDQRCSEIQTQLSALEITHQELSVQNEELLITRDQLSRNLQQVIAKNKCSDEE
SISLNKELEKLKGLLQEVQAENKNLTHAEGEHKAQMEELQRNRAETTDLLLKYQQDTQKV
EIINKQLQEDYENVCKEKNRLVDDLKERTSKLTCEKENLILERDSARNAKKSLDAKNAEL
QEKLKSLNLDKEDLTMRNTQLQALTEALTKEKQGMSSDLGATLVDKQSLEAVKEDLQNKL
SAAKKDLESSVRQCEELQATKVSLAQMLDSVKTSSQVTDSERLHLLQEKEDLIAIQRKVC
NEKEVLLGELEEIKEKFRVSSEQLSQSNEKLKEAVSSFEQEKEAFRLQNSKIEMALHVLR
KEKMSLDSALEQQKMDNERLAGEMEEKLTKSLSDNNALSLECDRLASDVRTNEGQLEGFS
KANDLLTQERSHLTAELEETKRQKDRVEAEASSLRREKAELQSDLQKHAADIEILTKGNS
DAVQEYSKLNRDYEKANSQLVQQVDDLKKACERLQTLQNDANDKVQCLQKDNHRLLQEIQ
ELKCQTQSLSGAKHLLQTQLQAESSERDKVLSDKDVVSKQLEDLQRTLSQVKQENQDMSS
NLTNADKQKKACLMDVEVLKTQLKQREQETSDLIEDKGQLLSNIEEMSKRMTSLTTQKED
LLAEQCKLEKNISSLHTSQEEWLLERTRLLAEIENVHATQKELEGDVRGLQTEKELLESQ
CRSAAVEVSASAAVREEMTSDISNLTAAKGALQEERDQANHKVSMLEAQLKNAISKQLEV
SEQLTTAMQERNQAQSTVEELLGSKQKDELKTLKNTLSKYQEDINVCKEQLCIESERTES
LCHEIEELKGAVCVKTQSMQMLQEENNKLTLDIDNDQKALRDLEKLKDEHSKLKKQLKLS
ESTLKEQFDKEKSVLQKSIHKNSALISEKDQQVENLRSELVVLRGESDSVKRLEGTVEAL
ERDKADLQDRVQRLEKDLPAGSGDVSEQLKEAREASESQIEFLNSVIVDLQRKNKELKDK
LEKMVDAALNGNNPSELDNYDSQDKEPLKKKLPPRLFCDICDCFDLHDTEDCPTQMQMPD
SPPHTTYHGSKGEERPYCDICEVFGHPTDSCNDDQTF
NT seq
6594 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagccaagcccagtgggatcaaagggcccagcaagataggaaggcctcctggg
acgggagcacccaagaccaaccccagcacagctaaagcaaatgcggtcgacaaatccgat
gcacgggtcggcggaggagatgctgagcagagcttccaggtcggggaccgtgtctgggta
aacgggaacaaacctggccacatacgctttttgggagatgcccagtttgccccgggacag
tgggctgggatcgttctagatgagccgattgggaagaacgacggctcagtggcaggggtg
cgctatttccagtgtgaagccctgcgaggaatattcacccgcccgtcaaagttgtccctc
acagaaggggaggctaatggcactcagacggcgccgccgtcccgcgctgcctcacccacg
ccttcagtcggcagcgtatcctcgcacacgcctgccacaaagtcagcattaccctcgacc
accaagaaggcctcctctgctgcacccgctgcacctgcaacaccggctacacccccctcc
aacctcgcacgcacaaacagtgaatctgtgtccaacctctccgagacgggatcagtcaag
aagggggaaagggaactgaagatgggcgaccgtgtattggttggtggtacgaaggcagga
gtggtacgtttccttggagaaaccgattttgctaaaggcgagtggtgcggcgtggaactg
gatgagcccttaggaaagaatgacggggcggtggcaggcacaagatattttcagtgccag
cccaagtatggcttatttgctccagtgcacaaagtcactcgcatcggcttcccttccacc
acgccagccaaagcaaaaaccaccgttcgcaaagcagcggccacgccatcggggctaaag
cggagccccagtgcctcctccatcagcaccatgagctctgtggcatcctcggtcagcgcc
aagcccagccgcacaggcctgctaacggagacatcgtcgcggtataatcgcaagatttca
ggcaccacagccctgcaggaggcgctgaaggagaagcagcagcacattgagcagcttatg
gctgagagggacatggagagagcggaagttgccagggctacgggccacgttggagaggtg
gagcaagagattggcctgctcagggacgaacaggagcagatggagaccaagatggatcag
ttacgtgccttggtagaagctgcagacaaagacaaagttgacctgctgaatcaactggag
gaggagcgtaggaaggtggaggaccttcagttccgcgtggaggaagcttgcatcaccaaa
ggagacctggagacgcagaccagactggagcatgcccacattaaggagcttgaacagagc
ctactctttgaaaagaccaaagctgagaaactccaaagagagttagaagaccatagggtt
gctactgtttcggagcgatcccgtataatggaccttgagaaggacctttctctgcgctcg
agagaggtagctgacctgcagctgcgtctcggcacccagcaaggctccgaggacgcaacc
tctcctctgtccccccttctggaggagataacgtctctgagggatcagttggcttcccaa
gaagttaagcagcaagaggagctaaccaagtacaaggagaagatggaagcccaagaaaag
gcccacagcgaggcagctgcccgcctccaggcgacatccgtgagcctctctggtgacaac
gaacagctgcagatgcgcatcagccaggctgagaaggagaatgcggatatcgtggattcg
tggcgttccaagttggaatccgttgttgcctctcaccagcaagccctggaggggctgaag
gggtccttcagcaatggcgcagatgcccagacgaaagaacttatcgaaaccaaaagtgaa
ctggagagactgaagattgagcagaatttcgccgtggaggaggcccgagtcaaacacgag
gccgcggctcaggaggcgcaggccctgaaggctcagctgggttctttgattgaggagaag
gaacgcctggaagagtcactgcggtccagcgtggaaaaagcagaggagcagcaccttgtg
gaaatggaagaagttcttggaaaactccataatgctgaagttaaggtgaatgagctcgag
gagaaggaagcaatgttggcgcagcaggcccaagacaaggagcgagaaaccaaagagcag
atttcagaaatggcggctttgcgtagccaagtagcacaaggcaaccaggagcttgtgacc
ctgaagagtcaattagagctggttcagagtcaagggaacaaccagggtgcccaggtcaat
gcattgagctcacagttggagggccgacagcaggaagtcctctctttacagaagagcctg
accaccctacagcaggagaaggaggccttggaacaggagcttggaggcctgaaacaaaag
ttggctgataacacagaggagcagaccatatcatcaaacactatgcaagaaacacttgag
aagctcagtaagaaggacgagcagtgcacatctctgaagagccaatcagagtctctgaga
agtcaacttgctgggctcgagaggaaactaaaggctgcagatgaaaaacttgagcaactc
tcaaaggacaaatgcaagctggaaaatgatatgtcggacatgatgaagacatctggtgat
agttcagtacagctgaccaaaatgaatgatgatctcaaacagaaagaaaggaggcttgag
gagttgcagagtcaactatctgaggagaaggagaaggtggctcactcgaatgaacaactc
cagcaagaaaggtcctgcagagagcaggagctgatggagaccagagatgcacatcagtct
caaataaggggccttcaggagactattgcaaacatggagaagagcgttaaacagggcgag
acccttgttgtgcaactcaaggcctcacaggagaaatccatctctcaggtttccgagctt
catgttgaggaagtagaggttctgcagagtcaggttaacaagttgaagcaggacctctcc
tccagcaaggacaaaaacctggagctggagaagatggtgtcagagctgcaggagtacaag
gaacgagctcagtgtctttctgctgagcttgactcccacaagcatgatgttgaacatttg
aacaatcaactggaaaagcagagtctagagttggaaattacgtgtaaggaaagggaagaa
gtcaaaggcgagaaaggcaaactggatcaacgttgttcagaaatccaaactcagctctct
gcccttgagattactcaccaggagctttctgtccagaatgaagagctgctcattactaga
gaccagctttccagaaatctacagcaggtaattgccaaaaacaagtgttcggatgaagaa
agtatttcattgaacaaggagctggagaagcttaaaggtcttcttcaggaagtacaggct
gaaaacaaaaacctgacgcatgccgaaggtgaacacaaggcccagatggaggagcttcaa
aggaaccgtgcagagacgaccgacttgctccttaaatatcagcaggacacccagaaagtg
gagattataaataagcaactacaagaggattatgaaaacgtctgcaaagagaagaaccgt
cttgtagatgacctgaaggaaagaacatcaaagctcacatgtgagaaggaaaatctcatt
ttagagcgagattctgccagaaatgccaaaaaatcgctcgacgccaagaatgctgagttg
caggaaaaacttaaatcgttgaacttggacaaagaagatctaacaatgaggaacacccag
ctgcaagccctcactgaagcactgactaaagagaagcagggcatgtcttctgacctcggt
gccactttggtggacaaacagagccttgaagcggtgaaggaggatctccagaataaactg
agtgctgccaagaaggatttggagagttctgtccgtcaatgtgaagaacttcaagccacc
aaagtgagtctggcccagatgcttgactcggtcaagacaagcagtcaggtgactgactcc
gagaggcttcaccttcttcaagagaaagaagacttgattgcaatccaaaggaaagtctgc
aatgagaaagaagtgctcctcggcgagctggaagaaatcaaagagaagttcagagtctcc
tcagaacaactctcacagtccaatgagaaacttaaagaagcggtatcatcttttgagcaa
gagaaagaagcgtttcgccttcagaattccaaaattgagatggctctacatgttctacga
aaagaaaagatgagcctggattcagcactagagcagcagaagatggataatgagcgtttg
gcgggagagatggaagagaagctcacaaaaagcctatctgacaataatgctctttccctt
gaatgtgatcggctagccagtgacgtcagaacaaacgagggccagttggaaggtttctca
aaagccaacgacctcttaactcaagagaggtctcatttgacagccgagctggaggaaacc
aaacggcaaaaagaccgagtcgaagccgaggcgtcctctttgaggcgagaaaaggccgag
ctacaaagtgacctgcagaaacacgccgccgacattgaaatccttacaaagggcaacagc
gacgctgtgcaagagtacagtaaactgaacagggattatgagaaggctaattctcaactt
gttcaacaggttgatgacctgaaaaaagcttgtgagcgtctgcaaacgctgcagaatgac
gctaacgacaaagtgcaatgcttgcagaaagacaaccaccgtctgcttcaggagatccag
gagttaaaatgtcagacgcaatcattgtcgggggccaagcaccttctgcaaacccagtta
caggccgagtccagtgaacgagataaagtcctgtctgacaaggatgttgtgtccaaacaa
cttgaggatctgcagagaacgttgtcccaagttaagcaagaaaaccaagacatgtcttct
aaccttacgaatgcggacaagcagaagaaagcctgtctgatggatgtggaggttttgaag
actcaattgaagcagcgagagcaagaaactagtgatttgatagaagataaagggcagtta
ttatctaacatagaagaaatgagcaaacggatgacctccctgaccacgcagaaagaagac
cttttagctgaacagtgcaagttggagaagaacatttcttctctccacacaagtcaggag
gagtggctcctagaacggaccaggctcctcgcagagatagaaaacgtgcacgctacccag
aaggagctggaaggagatgtcaggggcctgcaaacagaaaaggagcttttggaaagccag
tgcaggagcgccgctgtggaggtttctgcttctgctgctgtgagagaggagatgacctcg
gacatctcaaacctaaccgctgcgaagggcgccctgcaggaggagagagaccaagccaac
cacaaagtcagcatgctggaggcccaactaaaaaatgccatttctaagcagcttgaggtc
tcggagcagctgaccaccgccatgcaggagaggaaccaagcccagtccactgtggaagaa
ctcctgggctccaagcagaaggacgagcttaaaaccttgaagaacactctttccaaatac
caagaggatataaatgtttgcaaagagcagctttgcatagaaagtgagaggacggagagc
ctatgccatgaaattgaggagcttaaaggggcagtttgtgtaaagacgcagtccatgcag
atgctacaagaagagaacaacaagctgactctggatatcgataatgatcagaaagccctg
agggatcttgagaagctcaaagacgagcactcaaaactaaaaaaacagttgaagttgagt
gagagcaccttgaaggagcagtttgacaaggagaagtcagtcctccaaaagtccatccat
aaaaacagtgccttaatatcagagaaggaccagcaggtggaaaacctgaggagcgagctg
gttgtcctgcgcggggagagcgactccgttaagagactggaggggaccgttgaggccttg
gagcgggacaaggctgatctacaggaccgggttcagaggctggagaaggacctgcctgca
ggctctggtgatgtttctgaacaactgaaagaggccagagaggcttctgagagtcagatt
gagttcctgaattcagtcattgttgacctccaaaggaaaaataaggaactcaaggacaaa
ctggagaaaatggtagatgctgctctcaatgggaataatccaagtgagctggataactat
gacagccaggacaaggagccccttaagaagaagcttcccccgagactcttctgtgacatc
tgcgactgcttcgacctccacgacaccgaggactgtcccacacaaatgcagatgcccgac
tctcctccacacaccacctaccacggcagcaagggcgaggaacggccttactgcgacatc
tgcgaggtcttcggccaccccaccgactcctgtaacgacgatcagaccttttag
DBGET
integrated database retrieval system
