Pungitius pungitius (ninespine stickleback): 119224803
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Entry
119224803 CDS
T07626
Symbol
si:ch211-166a6.5
Name
(RefSeq) clustered mitochondria protein homolog
KO
K03255
protein TIF31
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ppug03012
]
119224803 (si:ch211-166a6.5)
Translation factors [BR:
ppug03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
119224803 (si:ch211-166a6.5)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLU
eIF3_p135
TPR_12
TPR_10
TPR_NPHP3
CLU_N
Motif
Other DBs
NCBI-GeneID:
119224803
NCBI-ProteinID:
XP_037338078
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Position
5:12126477..12136793
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AA seq
1414 aa
AA seq
DB search
MKDKVRRGGRNPSKADVTSLISGNDAVGNKQHEDSSFPVKIQGAGVEPFELQVRGFWLVQ
DAVMTLLLRDDVFPRSNLSLALAGTTLDPLAELQSLKGLKPGAVLRLVEEPYTALSARLH
LARVLELLRAPGPQDALREGRSPSILETLTQTPDSNLLNGKSLKRSLSNTKPEATKPDWA
PPEYLLPGSSERPLMALLPHSSQPESPSYLRDLCLSCWNPAPGHRKLQGDFLYITVVTME
GRRCEITSFPKGFFLNRSTEEVFDPRPAQSSPVCHNFTDLLCHISPAFKQTLTTLKNRSQ
LPPVERMPTPYHTLSWLGPSCASRSHKNNFSRLGVEEQPATQAPDWNEELQAARDLPLGS
LEERLQRDRALLQVNSAFVRAVMQGAETIVDGFAEPVNGNPEDPAFLWGGLFMSQGAASA
IFGGDRGRRAAQRLELKGVQAYSDIEGLQGLHTLPTAIVDYRGMRLSAQGLAPGLEASEQ
DQATTPASRGLLYGVTAGPQESPHRRRLLERLAHAAKCLSLQRHVVVGPNDHKVPLFTSV
DAQGLLGADGRYYILDVFRTFPADANFCTEVETESQTVPEEEESKTSTGEEKEKGGCLKE
GWPENYHSVSGLPRSFTHGLCRLRPELVQAFIQHKHCQFTQCVRETLDANGGFEECATAC
DSRATQAVRVACKEVGSISDIIFEMRFNPSVFSPEVSFPPGETKSMKLQERLLREAAAFI
ITHQIPDFLEFCRQSNEAPMDGVSLKQALHQRGINLRYLGHVITTISQSQHKDCLRHIMR
LVIGEIFTRSARRVFNSFLQGVDVPSLSAAVSHFLCCLLVPHFTPVAVCDDTKKKSKRRG
RGTGASESTPWSMLAGAELWNLVCQDAAETYNISDSLGPGPNHLVEHYGLQKLSLLREFC
LKTGVQLRLRDYILDNQNKAPIGPDDILNIFPVVKHVHMPTVDASKAYRAAQNFIQKGLL
DQAHEHLKEATYLFGRVCDDLHIEACYCHSLLAKVSFKQGKAAEARSVQLKAVVISERVL
GFDHPNTIHQYALLGVYVFAGGEDALAQKCLLRARLLMLTVHGEDHPYTATLDSCLGLVL
SGDQRGKFLKNALRLNTSFFGPAHLHTALTQQLLAQWMCSKGDYRSAMSHEKEALIAFTS
MFGEDHPQSRCSKEFLCTITKQAVKVERSLRQAGAECTEPTVEDLSPTRATVLEQMALLT
GIKSITYRDGLQEYRKKHKELKAAVAKELGFLVSDELIASQTVNGEGKSSDQEAGSRKEA
ENGGSPAAENTNEGQRELPVEETLMKNAATAVVNGHVVQANGREEKTDVDAGDSDRADSE
GKTEDAESEAGAAGQEAGNSSQSSVNSNIVNGEMKSQPVEVNGAINGAGDISVSPSVLKS
KGTWADVVSKPNGGRDTAVNGVAGKVTANGGVHE
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacaaagtgaggagaggagggaggaatccgtccaaggctgatgtcacaagccta
attagtggaaatgatgctgttggcaataagcaacacgaggactcatcgttccctgttaag
atccagggagccggagtagagccatttgagctacaggtccgtggattttggcttgttcaa
gatgcagtaatgactctgcttttgagggatgacgtttttccacgttccaacttgtcgctg
gcactcgctggaacgactttggatccgctggccgaactgcaaagccttaaggggcttaaa
ccaggagccgtcctgcgcctggtggaagaaccctacaccgccctctcagcccgactccat
ctggctcgtgtgctcgagctgctgagagcacctggacctcaggatgcactgagagaagga
cgctcaccaagcatactggagacactcacacaaacaccagattccaacttactaaatgga
aagagcctgaaacgctcgttgagcaacacaaaaccggaagcaaccaaacccgattgggct
ccccctgagtacctgctccctggttcctcagagagacccctcatggccctgctaccacac
agctcccaaccagagtcccccagctacctgagagacttgtgtctcagctgttggaacccg
gcgccaggacacaggaagctgcagggagacttcctgtacatcaccgtggtgacaatggag
gggcgacggtgtgaaatcacatcctttcccaaagggttcttcctcaatagatctacagaa
gaagtgtttgatcctcgtccggcgcagtcttccccagtctgtcacaacttcaccgacctg
ctgtgtcacatcagcccggccttcaaacaaactttgaccacgctcaagaataggtcccag
ttacctccagtagaacgaatgccgactccttaccacaccctgagctggctcgggccctcc
tgcgcctctcgctcccataaaaacaacttcagccgactgggagtggaagaacagcctgca
acacaggctccagactggaatgaggagttgcaagctgccagagatcttccactaggcagc
ctggaggaaaggcttcagagggacagggctctgctccaggttaacagcgcatttgttagg
gctgtgatgcagggggcagaaactattgtagatggctttgcggagcctgtgaatggaaac
ccagaggacccagctttcctgtggggcggcctgttcatgagccaaggggctgctagtgcg
atctttggaggggaccgaggtcgcagggctgctcagaggctggagcttaaaggagttcag
gcctacagtgacattgaggggttgcaggggctgcacactctacctacagccatcgtagac
tacagaggaatgcgtctatctgctcagggcctggcccctggtttggaggcctcagaacag
gaccaggcaactactcctgcctcaagaggcttgctgtacggggtgaccgcaggaccccaa
gagtcccctcatcgcagacggctcctagagcgcttggctcacgcggccaaatgtctctct
ctccagagacacgttgttgtggggcccaacgatcacaaagtaccactgttcacctcggtg
gacgcccagggattgttgggcgctgatggcaggtactacatactggatgtgttcaggacc
ttcccagctgatgccaacttctgcacagaagtggagacagaaagccagacagtccctgaa
gaagaggagagtaaaacaagcactggggaagaaaaggagaaggggggctgtttaaaagag
ggttggccagagaattatcactcagtctccgggcttccaaggagcttcacccacggactc
tgtcgactgaggccagagctggtgcaggccttcatccagcacaagcattgccagttcact
cagtgtgtcagggagacgttggacgcaaatggaggctttgaagaatgtgcaacagcttgt
gattctcgagccactcaggcagtccgagttgcttgtaaagaagtgggctcaatcagcgac
atcatctttgagatgcgctttaacccaagtgtattctctccagaagtatccttccctcct
ggggaaactaagtcaatgaagctgcaggagaggttattgagggaagctgctgctttcatc
atcacacatcagataccagactttctggagttttgtcgacaaagcaatgaggcgccaatg
gatggagtctctctaaaacaggcgctacaccaacgaggcatcaacctgagatatctgggc
catgtaatcaccaccatcagccaatcacaacacaaggactgcctgaggcatataatgaga
ttggtcattggggaaatcttcactcgctcagccagaagagtgttcaacagtttcctccag
ggtgtggacgtgccgagtctctctgcagctgtcagtcatttcctgtgctgcctgctggtg
cctcacttcacgcccgtggctgtatgtgacgataccaaaaagaagtccaagcgacgtggc
cgagggactggggcgtctgaaagcacgccctggagcatgctcgcaggggccgagctgtgg
aacctggtctgccaggatgccgcggagacgtataacatctccgacagcctcggccctggt
ccaaaccacctggtggagcactacggccttcagaagctctccctgctcagagagttctgt
ttaaagactggagtgcagttgagactgagagactacatccttgacaaccaaaataaagct
cccattggtccagacgacatcctcaacatcttccctgtggtcaagcatgttcacatgccc
accgtggatgcttccaaagcatatcgagctgcacagaacttcattcagaagggtctgctg
gatcaggcccatgagcacctgaaggaagcaacctacttgttcggtcgggtgtgtgatgac
ctgcacattgaggcctgttattgccacagcctgttggccaaggtgtcctttaagcagggc
aaggcagctgaggctcgcagtgtccagttgaaggcagtggtcatcagtgagagagtgctt
ggctttgaccatccaaacactatccaccaatatgctctcttgggcgtgtatgtgtttgct
ggaggggaggatgccctggcccagaagtgtctcctcagagctcgtctgctaatgctaaca
gtccacggagaggaccatccctacactgcaacactggacagctgtctcgggttggtgctg
agtggagatcagagagggaagttcttaaagaacgccctcaggctcaacacctcattcttc
ggccctgcacatctgcacactgctctcactcagcagctgttggcccagtggatgtgcagc
aagggagactacaggagtgctatgagccacgagaaagaggctctcattgcttttacctcc
atgtttggagaggaccatcctcagtcccgctgcagcaaagagtttctgtgcactataacc
aagcaagcggtgaaggtggagcgctctctcagacaggcaggagctgagtgcacggagccg
actgtggaggatctaagtcccacgcgtgccactgtgctggagcaaatggccctgttgact
gggatcaaaagcatcacctacagagacgggctccaggagtataggaagaaacacaaagag
ctaaaggcggcagtggcaaaagaactgggattcctagtgagcgacgagctcatcgcctca
cagactgtgaatggagaaggtaaaagctcagatcaagaagcaggaagcaggaaggaagca
gagaacggaggaagcccagcggcggagaataccaacgagggccaacgggagctgccagtg
gaagagaccttgatgaagaatgccgccacagcggtagtcaatggtcacgtggtgcaggcg
aacgggcgcgaggagaaaacagatgtagatgcaggagacagtgacagagcagattctgag
ggcaagacagaggatgcagagtcagaggccggggctgcaggacaggaagctgggaacagc
tcacagagtagcgtaaacagcaacatagtgaatggggagatgaaatcacagccggttgag
gtcaatggtgccataaatggagccggtgacatctctgtgagcccgtcagtgcttaagagc
aaaggaacctgggccgatgttgtttcaaaacccaacggagggagagacacagcagtcaac
ggggtagcaggaaaggtcactgctaatgggggagttcatgagtga
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