Pungitius pungitius (ninespine stickleback): 119224815
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Entry
119224815 CDS
T07626
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ppug04054
]
119224815
Pattern recognition receptors [BR:
ppug04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
119224815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
LRR_6
NACHT
NOD2_WH
PRY
SPRY
LRR_4
Motif
Other DBs
NCBI-GeneID:
119224815
NCBI-ProteinID:
XP_062418590
LinkDB
All DBs
Position
5:22363409..22454833
Genome browser
AA seq
1428 aa
AA seq
DB search
MNQAEDPEEGVPPSEAPLCGEHDRQTKAQRIHKRPGPEPGPGTGPGPSCVSMKSNRSMEA
PIVFKDVRPSVDSSSHQQRRKSPEPSCVSMKSDWSKDNPLNFKDGGRSFDPQEDQESSEV
PTESAQQHQTHLDSIFKLLEENILTFMKNELMNIQNIVNSDYPECLEEEEVLDEDQRRSR
EAFVKISVHFLRRMKQEELAERLQSRLCVAVCQRELKSNLKKKFQSVFEGIAKAGNPTLL
NEIYTELYITEGGTAEVNEEHEVRQIETASRKPARPETTIRQEDLFKASAGGEEPIRTVM
TKGVAGIGKTVLTQKFTLDWAEDKDHQDIQFTFPFTFRELNVLREKKFSLVGLVHHFFSE
TRAAGICRFEEFQVVFIFDGLDECRLPLDFHNNEILTDVTETSSVDVLLTNLIRGKLLPS
ARLWITTRPAAANQIPPECVGMVTEVSGFTDPQKEEYFRKKFRDEGQASRLVSHMKTARS
LHIMCHIPVFCWITATVLKENLKTREGGELPKTLTEMYIHFLVVQSKVKKVKYDGGAETD
PHWSPESSKMIASLGKLAFDQLQKGHLIFYESDLTECGINIRAASVYSGVFTQIFREESR
LYQDKVFCFVHLSVQEFLAALHVHLTFISSGVNLLSEEQTTFPVSKVFGDKPKPMCLYQS
AVDQALQSPNGHLDLFLRFLLGLSLETNQMLLRGLLTQTGSRSKTKRRTVQYIKEKISED
VSPEKSINLFHCLNELNDGSLVEEIQQSLGSGRLSTDQLSPAQWSALVFILLSSQEDLEV
FDLKKYSASEEALLRLVPVVKASNKALLDGCNLSERSCEALSSVLSSQSSSLRELDLSNN
NLRNSGVKLLSAGLKSPHCDLETLRLYGCNLSDRSCEALSSVLSSQSSSLRDLDLSNNDL
QDSGVKLLSVGLKSPHCDLETLRLSGCNLSERSCEALSSVLSSQSSSLRDLDLSNNDLQD
SGVKLLSAGLKSPHCDLETLRLSGCNLSERSCEALSSVLSSQSFSLRDLDLSNNDLQDSG
VKLLSAVLKSPHCDLETLRLDGCNLSERSCEALSSVLSSQSSSLRNLDLSNNDLQDSGVT
LLSAGLKSPHCDLETLRLHGCNLSDESCEPLSSVLSSQSSSLRDLDLSNNDLQDSGVKLL
SAGLKSPHCDLETLRLSGCLITEEGFASVASALISNPSHLRELDLGYNHPGDSGVMLLSA
ILKDPHWRLETLRVEPAGVRWLRRGLRKYSCELTIDTNTVNRKLKLSHNNRKVTCVKEEV
QPYPDHPDRFNNWSQLLCRTGLTGRCYWEVKWRGGVNVSVSYRGIRRKGVSDVCWFGMND
QSWSLRCSDEGYSVCHNNTVTPITSSSSSSGRVAVYVDCPAGSLSFFRVSSDSLIHLHTF
STTFTEPLNPGFGFNFKSMFGLKIGSSVSLCSLEEEESSPGREPYLNI
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaggctgaggacccagaggagggagtccctccctctgaagcccctctgtgtggg
gaacatgacagacagaccaaagctcagaggatccataagagaccaggaccagaacctgga
cctggaactggacctggacccagctgtgtgtccatgaagagtaaccggtctatggaagct
cctatagtcttcaaagatgtccgtccctctgttgattcaagttcacatcagcagagaaga
aagtctcctgaacccagctgtgtgtccatgaagagtgattggtctaaagataatccttta
aacttcaaagatggaggccgttcttttgacccacaagaggaccaggagagctcagaggtt
cccacagagtctgcccagcagcatcaaacacacctggactccatcttcaagctgctggaa
gagaacatcctcacttttatgaagaacgagctgatgaacatccagaatattgtaaattca
gattaccctgaatgcttagaggaagaggaggttctggatgaagaccagaggagaagcaga
gaggcatttgtcaagatctcagtgcacttcctaaggagaatgaagcaggaggagctggct
gagcgtctgcagagcagactttgtgttgcagtttgtcagcgtgaactcaaatccaacctg
aagaagaagttccagtctgtgtttgagggcatcgctaaagcaggaaacccaacccttctg
aatgagatctacacagagctctacatcacagagggagggactgcagaggtcaatgaagaa
catgaggtcagacagattgaaacagcatccaggaaaccagccagaccagaaacaaccatc
agacaagaagacctcttcaaagcctcagctggaggagaagaaccaatcagaacagtgatg
actaagggagtggctggcattgggaaaacagtcttaacacagaagttcactctggactgg
gctgaagacaaagaccaccaggacatacagttcacatttccattcaccttcagagagctg
aatgtgctgagagagaagaagttcagcttggtgggacttgttcatcacttcttcagtgaa
accagagcagcaggaatctgcaggtttgaagagttccaggttgtgttcatctttgacggt
ctggatgagtgtcgacttcctctggacttccacaacaatgagatcctgactgatgtcaca
gagacctcctcagtggatgtgctcctcacaaacctcatcaggggcaagctgcttccctct
gctcgcctctggataaccacacgacctgcagcagccaatcagattcctcccgagtgtgtt
ggcatggtaacagaggtcagcgggttcactgacccacagaaggaggagtacttcaggaag
aagttcagagatgaggggcaggccagcaggctagtctctcacatgaagaccgcacgaagc
ctccacatcatgtgccacatcccagtcttctgctggatcactgctacagttctgaaggag
aatttgaagaccagagagggaggagagctgcccaagaccctgactgagatgtacattcac
ttcctggtggttcagtccaaagtgaagaaggtcaagtacgatggtggagctgagacggat
cctcactggagtccagagagcagtaagatgattgcgtctctgggaaaactggcctttgat
cagctgcagaaaggccacctgatcttctatgaatccgacctgacagagtgtggcatcaat
atcagagcagcctcagtgtactcaggagtgttcactcagatctttagagaggagagcaga
ctgtaccaggacaaggtgttctgcttcgtccatctgagtgttcaggagtttctggctgct
cttcatgtccatctgaccttcatcagctctggtgtcaatctgctctcagaagaacaaaca
accttcccggtgtctaaagtctttggcgacaaacctaaaccaatgtgtctctaccagagt
gctgtggaccaggccttacagagtcctaatggacatctggacttgttcctccgcttcctc
ctgggtctttcgctggagacgaatcagatgctcctacgaggtctgctgacacagacagga
agtcgctcaaaaaccaaacggagaacagtgcagtacatcaaggagaagatcagtgaggat
gtgtctccagagaaaagcatcaatctgttccactgtctgaatgaactgaatgatggttct
ctagtggaggagatccaacagtcccttggttcaggacgtctctccacagatcaactgtct
cctgctcagtggtcagctctggtcttcatcttactgtcatcacaagaagatctggaggtg
tttgacctgaagaaatactctgcttcagaggaggctcttctgaggctggtgccagtggtc
aaagcctccaacaaagctctacttgatggttgtaacctctcagagagaagctgtgaagct
ctgtcctcagtcctcagctcccagtcctctagtctgagagagctggatctgagtaacaac
aaccttcggaattcaggagtgaagctgctgtctgctggactgaagagtccacactgtgac
ctggagactctcagactttatggttgtaacctctcagatagaagctgtgaagctctgtcc
tcagtcctcagctcccagtcctctagtctgagagatctggatctgagtaacaacgacctg
caggattcaggagtgaagcttctgtctgttggactgaagagtccacactgtgacctggag
actctcagactcagtggctgtaacctctcagagagaagctgtgaagctctgtcctcagtc
ctcagctcccagtcctctagtctgagagatctggatctgagtaacaacgacctgcaggat
tcaggagtgaagctgctgtctgctggactgaagagtccacactgtgacctggagactctc
agactcagtggctgtaacctctcagagagaagctgtgaagctctgtcctcagtcctcagc
tcccagtcctttagtctaagagatctggatctgagtaacaacgacctgcaggattcagga
gtgaagctgctgtctgctgtactgaagagtccacactgtgacctggagactctcagactt
gatggttgtaacctctcagagagaagctgtgaagctttgtcctcagtcctcagctcccag
tcctctagtctaagaaatctggatctgagtaacaacgacctgcaggattcaggagtgacg
ctgctgtctgctggactgaagagtccacactgtgacctggagactctcagacttcatggc
tgtaacctctcagatgaaagctgtgaacctctgtcctcagtcctcagctcccagtcctct
agtctgagagatctggatctgagtaacaacgacctgcaggattcaggagtgaagctgctg
tctgctggactgaagagtccacactgtgacctggagactctcaggctgtcaggctgtctg
atcacagaggaaggctttgcttctgtggcctcagctctgatttccaacccctcccatctg
agagagctggacctgggatacaatcatccaggagactcaggagtgatgctgctttctgct
atactgaaggatccacactggagactggagaccctcagggtggagcctgctggagtccga
tggttgagacgaggtctgaggaagtattcctgtgaactcacaatcgacacaaacacagta
aacagaaaactcaaactgtctcacaacaacaggaaggtgacatgtgtgaaggaggaggtt
cagccatatcctgatcatccagacagatttaacaactggtctcagctgctgtgtagaact
ggtctgactggtcgctgttactgggaggtcaagtggagaggaggagttaatgtatcagtg
agttacagaggaatcaggaggaaaggagtcagtgatgtctgttggtttggaatgaatgat
cagtcctggagtctgagatgctctgatgaaggttactctgtctgtcacaataatacagta
acacccatcacctcctcctcctcctcctctggtagagtagcagtgtatgtggactgtcct
gctggctctctgtccttcttcagagtctcctctgactcactgatccacctccacaccttc
agcaccacattcactgaacctcttaatcctgggtttgggtttaacttcaagtccatgttt
gggctcaagattggttcctcggtgtctctgtgttctctagaggaggaagagtcttctcct
ggtagagaaccttacctcaacatatag
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integrated database retrieval system
