Pungitius pungitius (ninespine stickleback): 119224826
Help
Entry
119224826 CDS
T07626
Name
(RefSeq) protein HIRA isoform X1
KO
K11293
protein HIRA/HIR1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppug03036
]
119224826
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
119224826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hira
Beta-prop_CAF1B_HIR1
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
EIF3I
Beta-prop_IFT140_1st
WDR55
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
HIRA_B
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
NBCH_WD40
WD40_like
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
119224826
NCBI-ProteinID:
XP_037338123
LinkDB
All DBs
Position
5:complement(23142530..23150350)
Genome browser
AA seq
1017 aa
AA seq
DB search
MKLLKPSWLSHNGKPIFSVDIHPDGTKFATGGQGEDSGKVMIWNMAPVLRDEDEKNESIP
KMLCQMDNHLACVNCVRWSNNGLYLASGGDDKLVMVWKRAAFIGPSTVFGSSSKLANVEQ
WRCVTILRNHTGDVMDVAWSPHDVWLASCSVDNTIVIWNARKFPEMVTCLRGHTGLVKGL
TWDPVGKYIASQADDHSLRVWRTVDWQMESNITKPFNECGGTTHVLRLSWSPDGQYLVSA
HAMNNSGPTAQIVERDGWKTNMDFVGHRKAVTVVKFNPKIFKKKQKNGSAPKPGCPYCCC
AVGSKDRSLSVWLTSLKRPLVVIHDLFDKSIMDISWTLTGLGMLVCSMDGTVAYLDFSLD
ELGDPLNEEEKNSIHQNIYGKSLAITSTEAQLSTTIIENPEMLKYQQERQSSAQAGPGGG
APEASAPKLNSVVNGESLEDIRKNLLKKQVETRTPDGRRRITPLCIAQLDTGDFSPALFN
SAPILPSGSSMSNQLTSQLSSDSSPGPASSLGLRPGHDPMLTSPPAGAAKGPEENRDGVK
CGLLLTSASKMEPMKALDSRFTERSKATPGVTAAITSITGLLPLDSRLKDGVPGPKDTKS
KEDSSSDSEDKMASINKNLSFSKRKPELLMEGGEGVVEKRRKGRPRKDKMAAPSAQPFTQ
VTPPAEREHSRVAPPPPAALKLPTPSIKKAFSLQVSAEPPVFLEVENEVSLVAGSKLSQL
RCSRDGREWNTLLPSSVVTAAGSSDVFAVACQDRMVSVFSSCGRRLLPAIQLATPTSALH
CSAHFVMALTAGATLSVWDVQKQKALVKNESLLSILSGADITVSQSLLTQQGVPVIGLSN
GKSYCFSSSLETWTLVADKGDSMVQCADFRSCLPTHDAPVSSGPLAVMQGRNLNSAGRLA
SRLSSTPHHLQQSMTLAFLENQLTSALTLQSAAEYRHWLLIYARFLVNEGSENRLRELCK
ELLGPVHKSAATAWEPSTLGLRKRELLRDVLPVMVENLRFQRLFTEYQDQLELLRTK
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgctgaagccgagctggttgagccacaacggcaaacccatcttctcggtggac
atccaccctgatgggacaaaatttgcgaccggcgggcaaggagaggattccggcaaggtg
atgatctggaacatggcgccggtcctcagagacgaggacgagaagaacgagagcattccc
aagatgctttgccagatggacaatcacctagcgtgtgtgaactgtgtgcgctggtccaac
aacgggctgtacctggcatcggggggggacgacaagctggtcatggtgtggaagagggct
gctttcatcgggccgagcaccgtgttcgggtcgagcagcaagctggccaacgtggagcag
tggaggtgtgtcaccatcctgaggaaccacactggagatgtgatggacgtggcctggtct
cctcatgacgtgtggctggcctcctgcagcgtggacaacaccatcgtcatctggaacgct
cgcaagtttccagagatggtgacctgtctgcggggacacacggggctggtcaaaggtctg
acgtgggacccggtggggaagtacatcgcctcgcaggcggacgaccacagcctgcgggtg
tggaggacggtggactggcagatggagtccaacatcaccaaacccttcaacgagtgcggg
gggacgacccacgtcctgcgtctgtcctggtcccctgacgggcagtacctggtgtcggcc
cacgccatgaacaactctgggcccacggcccagatcgtggagcgggacggctggaagacc
aacatggacttcgtgggacaccgcaaggccgtgaccgtggtgaaattcaacccaaagatc
ttcaagaagaagcagaagaacggcagcgcccccaaacccggctgcccgtactgctgctgc
gccgtcggcagcaaggaccgctcgctgtccgtctggctgacctccctgaagcgccccctg
gtggtcatccacgacctgttcgacaaatccatcatggacatctcctggactctgacgggt
ctgggcatgttggtgtgttcgatggacggcaccgtggcctacctggacttctctctggac
gagctgggagaccctctgaacgaggaggagaagaacagcatccaccagaacatctacggt
aagagtctggccatcaccagcaccgaggcccagctctccaccaccatcatcgagaacccc
gagatgctcaagtaccagcaggagcgtcagagctctgctcaggccgggccgggggggggc
gcgcccgaggcctcggcccccaaactcaacagcgtggtgaacggagagtcgctggaggac
atcaggaagaaccttctgaagaagcaggtggagacgaggacccctgatggcaggaggcgg
atcacgccgctctgcatcgcccagctggacacgggcgacttctccccggcgctcttcaac
agcgcccccatcctgccctcgggctcctccatgtccaaccagctcacctctcagctcagc
tccgactcctccccgggccccgcctcctccctggggctgaggcccggccacgaccccatg
ctcacctcgcctccggccggcgccgctaagggcccggaggagaaccgcgacggagtgaag
tgcggcctgctgctcacctccgcctccaagatggagcccatgaaggctctggactccagg
ttcacagagaggtcaaaggccacgcccggggtcaccgccgccatcacctccatcaccggc
ctgctgccgctggacagcaggttaaaggacggcgtccccggcccgaaggacacgaagagc
aaagaggacagcagcagcgacagcgaggacaagatggcctccatcaacaagaacctgtcc
ttcagcaagaggaagcccgagctgctgatggagggaggggagggggtggtggagaagagg
aggaagggacggcccaggaaggacaagatggccgcccccagcgcccagcccttcacccag
gtgactcccccagcggagcgagagcacagccgggtggccccgccccccccagctgctctc
aaactacccaccccgagcataaagaaggccttcagtctgcaggtgagcgccgagccgccg
gtgttcctggaggtggagaacgaggtgtcgctggtcgccgggtccaagctcagccagctg
cgctgctccagagacggacgggagtggaacacgctgctgcccagctcagtggtcacggca
gcagggagcagcgacgtcttcgccgtggcctgccaggacaggatggtgtcggtcttctct
tcttgtgggcggcggctcctcccggccatccagctggccacgcccacctcggccctgcac
tgctccgcccactttgtcatggcgctgacggccggagcgacgctgtccgtctgggacgtc
cagaagcaaaaagctctggtgaagaacgagtctctgctgagcatcttatcaggtgccgac
atcacggtgtcccagtctctgctgacccagcagggcgtcccggtcatcggcctgtccaac
gggaagtcctactgcttcagctcctcgctggagacatggactctggtagcagacaaagga
gactccatggtccagtgtgccgacttcaggagctgcctgcctacccatgatgcacctgtg
tcctcagggccgctggctgttatgcagggacgcaacctcaacagcgccgggcggctggcg
tcccgcctctcctccaccccccaccacctgcagcagagcatgacgctggccttcctggag
aatcagctgacgtcggctctgacgctgcagtcggcggcggaatatcgccactggctgctc
atctacgcccgcttcctcgtcaacgaaggctctgagaatcgcctcagagaactctgcaag
gagctgctgggtcccgtccacaaatcagccgccacggcctgggagcccagcactctgggc
ctgcggaagcgcgagctgctgcgggacgtcttacccgtcatggtggagaacctgaggttc
cagagactcttcaccgagtaccaggaccagctggagctgctgcgcaccaaataa
DBGET
integrated database retrieval system
