Pungitius pungitius (ninespine stickleback): 119224935
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Entry
119224935 CDS
T07626
Name
(RefSeq) protein NLRC3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ppug04054
]
119224935
Pattern recognition receptors [BR:
ppug04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
119224935
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
PRY
SPRY
LRR_6
LRR_1
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
119224935
NCBI-ProteinID:
XP_062417672
LinkDB
All DBs
Position
4:complement(6768747..6780785)
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AA seq
1136 aa
AA seq
DB search
MERYESMEDVMNCKDVRPSVDARIHQRLGSGYGPYPETGPGSGPKPSCVSLKSNQSMEAH
LYRPSVDASSHQQRRKSPEPSCVSMKSDRSKDFPINFKDGCRSFDPEENQESSEVPTGQS
AQQHQKHLDSIFMLLEENILTFVKNELKKIQKVVSSDFPGSWRKDEEVLDGKDEEQRRSR
EAFVKISLHFLRRMKQEELAERLQSRLLAPVCQRELKSNLKKKFQCVFESIAKAGNPTLL
NEIYTELYITEGRTAEVNEEHEVRQIETASRNPARPETTIRQEDLFKASAGGEEPIRTVM
TKGVAGIGKTVLTQKFTLDWAEDKDHQDIQFTFPFTFRELNVLKKKFSLVGLVHHFFSET
RAAGICRFEEFQVVFIFDGLDECRLPLDFHNNEILTDVTESASVDVLLTNLIRGKLLPSA
RLWITTRPAAANQIPPECVGMVTEVRGFTDRQKEEYFRKRFRDEEQASGIISHIKTSRSL
HIMCHIPVFCWITGTVLEEVLKTREGGELPNTLTEMYIHFLVVQSKVKKVKYDGGAETDP
HWSPESRKMIESLGKLAFGQLQKGHLIFYESDLTECGIDIRAASVYSGVFTQIFREESGL
YQDKVFCFVHLSVQEFLAALHVHLSFISSGVNLLLGKKYPSSLVFRDKPKPQRLYQSAVD
QALQSPNGHLDLFLRFLLGLSLETNQTLLRGLLTQTGSHSKTNKRTVQYIKEKISENVSP
KKSINLFHCLNELNDGSLVEEIQRSLRSGRLSTDELSPAQWSALVFILLSSQEDLEVFDL
KKYSASEEALLRLLPVVKASNKALLSGCNLSQRSCEALSSVLSSQSSSLRELDLSNNNLQ
DSGVKLLSAGLKSPHCDLETLRLSGCLITEEGFASLASALSSNPSHLRELDLSYNHPGDS
GVKLLSAGLEDPHWRLETLRVEPDGVRWFKPALMKYSCELTIDTNTVNRKLKLSDNNRKV
TRVEEEVQSYPDHPDRFDYWPQLLCRTGLTGRCYWEVECRGGVYLSVSYRGIRRKGNSYD
CWFGGNHQSWCLMCSDKGYYVCHNNTVTHIPSSSSSSSSSGRVAVYVDCPAGSLSFYRVS
TDSLIHLHTFSTTFTEPLYPGFCLWFWPGSGSSVSLCSLQEGESPPGGEPSSLLTT
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atggagcggtacgagtctatggaggatgttatgaactgcaaagatgtccgtccctctgtt
gatgcaaggatccatcagagacttggatctggatatggaccttatcctgaaactggtcct
ggatctggacctaaacccagttgtgtgtccttgaagagtaaccagtctatggaggctcat
ctataccgtccctctgttgatgcaagttcacatcagcagagaagaaagtctcctgaaccc
agctgtgtgtccatgaagagtgatcggtctaaagattttccaataaacttcaaagatgga
tgccgttcttttgacccagaagagaaccaggagagctcagaggttcccacaggtcagtct
gcccagcagcatcaaaaacacctggactccatcttcatgctgctggaggagaacatcctc
acttttgtgaagaacgaactgaagaagatacagaaggttgtgagttcagatttcccaggg
agttggaggaaagatgaagaggtgctggatggcaaggatgaagagcagaggaggagcaga
gaggcatttgtgaagatctcattgcactttctgaggagaatgaagcaggaggagctggct
gagcgtctgcagagcagacttcttgctccagtttgtcagcgtgaactcaaatccaacctg
aagaagaagttccagtgtgtgtttgagagcatcgctaaagcaggaaacccaacccttctg
aatgagatctacacagagctctacatcacagagggaaggactgcagaggtcaatgaagaa
catgaggtcagacagattgaaacagcatccaggaacccagccagaccagaaactaccatc
agacaagaagacctcttcaaagcctcagctggaggagaggaaccaatcagaacagtgatg
actaagggagtggctggcattgggaaaacagtcttaacacagaagttcactctggactgg
gctgaagacaaagaccaccaggacatacagttcacatttccattcaccttcagagagctg
aatgtactaaagaagaagttcagcttggtgggacttgttcatcacttcttcagtgaaacc
agagcagcaggaatctgcaggtttgaagagttccaggttgtgttcatctttgacggtctg
gatgagtgtcgacttcctctggacttccacaacaatgagatcctgactgatgtcacagag
tcggcctcagtggatgtgctcctcacaaacctcatcagggggaagctgcttccctctgct
cgcctctggataaccacacgacctgcagcagccaatcagatccctcctgagtgtgttggc
atggtgacagaggtcagagggttcactgaccggcagaaggaggagtacttcaggaagagg
ttcagagatgaggagcaggccagcgggatcatctctcacatcaagacctcacgaagcctc
cacatcatgtgccacatcccagtcttctgctggatcactggtacagttctggaggaggtg
ttgaagaccagagagggaggagagctgcccaataccctgactgagatgtacatccacttc
ctggtggttcagtccaaagtgaaaaaagtcaagtacgatggaggagctgagacggatcca
cactggagtccagagagcaggaagatgatcgagtctctgggaaaactggcctttggtcag
ctgcagaaaggtcacctgatcttctatgaatccgacctgacagagtgtggcatcgatatc
agagcagcctcagtgtactcaggagtgttcactcagatctttagagaggagagcggactg
taccaggacaaggtgttctgcttcgtccatctgagtgttcaggagtttctggctgctctt
catgtccatctgtcgttcatcagctctggtgtcaatctgctgttagggaaaaaatacccc
tcctcgttggtctttagagacaaacccaaaccacaacgtctctaccagagtgctgtggac
caggccttacagagtcctaatggacacctggacttgttcctccgcttcctcctgggtctt
tccctggagaccaatcagactctcctacgaggtctgctgacacagacaggaagtcactca
aagaccaataagagaacagtgcagtacatcaaggagaagatcagtgagaatgtgtctcca
aagaaaagcatcaatctgtttcactgtctgaatgaactgaatgatggttctctagtggag
gagatccaacggtcccttcgttcaggacgtctctccacagatgaactgtctcctgctcag
tggtcagctctggtcttcatcttactgtcatcccaagaagatctggaggtgtttgacctg
aagaaatactctgcgtcagaggaggctcttctgaggctgctgccagtggtcaaagcctcc
aacaaagctctactgagtggttgtaacctctcacagagaagctgtgaagctctgtcctca
gtcctcagctcccagtcctctagtctgagagaactggatctgagtaacaacaacctgcag
gattcaggagtgaagctgctgtctgctggactgaagagtccacactgtgacctggagact
ctcaggctgtcaggctgtctgatcacagaggaaggctttgcttctttggcctcagctctg
agctccaacccctcccacctgagagagctggacctgagctacaaccatccaggagactca
ggagtgaagctgctttctgctggactagaggatcctcactggagactggagactctcagg
gtggagcctgatggagtccgatggttcaaaccagctctgatgaagtattcctgtgaactc
acaatcgacacaaacacagtaaacagaaaactcaaactgtctgacaacaacaggaaggtg
acacgtgtggaagaggaggttcagtcatatccagatcatccagacagatttgactactgg
cctcagctgctgtgtagaactggtctgactggtcgctgttactgggaggttgagtgtaga
ggaggagtttatttatcagtgagttacagaggaatcaggaggaaaggaaacagttatgac
tgttggtttggagggaatcatcagtcctggtgtctgatgtgctctgataaaggttactat
gtctgtcacaataatacagtaacacacatcccctcctcctcctcctcctcctcctcctct
ggtagagtagcagtgtatgtggactgtcctgctggctctctgtccttctacagagtctcc
actgactcactgatccacctccacaccttcagcaccacattcactgaacctctttatcct
gggttttgcttatggttctggcctggttctggttcctcagtgtctctgtgttctctgcag
gagggagagtctcctcctggtggagaaccttcctctctgctcaccacatag
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