Pungitius pungitius (ninespine stickleback): 119224947
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Entry
119224947 CDS
T07626
Symbol
ccdc117
Name
(RefSeq) coiled-coil domain-containing protein 117 isoform X1
KO
K27967
coiled-coil domain-containing protein 117
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppug03036
]
119224947 (ccdc117)
03400 DNA repair and recombination proteins [BR:
ppug03400
]
119224947 (ccdc117)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119224947 (ccdc117)
DNA repair and recombination proteins [BR:
ppug03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
119224947 (ccdc117)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC117
Motif
Other DBs
NCBI-GeneID:
119224947
NCBI-ProteinID:
XP_037338330
LinkDB
All DBs
Position
5:11159327..11162245
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AA seq
282 aa
AA seq
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MCTSSNRMTDWIIVHRPAPTSSERGYLPAMYSFSGPTSLPEFELGSASTSGHLQRATLSN
NSWETRSLRKHRRTVEDEGCTAKRRRLMFEAEVGISENSSTATRRDWSANGSPPAPAVPK
PRPAPQPSSALPRPEVESSCMEVEAAQRKLQEIEDRITLEDDDEDEDLDLEPAPRRPVLV
MSDSLKEGLQRGISDILPHTVAQSVSHSCMELVLWRPPDDPFCRKRKGTVQRQRKQLIVS
QQPPTPCSSPTPPSASSPPADPQSSPYVFPVPHSSGVEDMEM
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtgcacctcctcaaatcgtatgaccgactggatcatcgtgcatcgtcctgctcccaca
agcagtgaacgggggtatctgccagccatgtattcattttcgggccccacaagccttcca
gaatttgaactcggatctgcaagtacctctggtcacctacagagagccactctatccaac
aacagttgggagacaagatccctcaggaagcacaggaggacagttgaagatgagggatgc
actgccaaaaggaggcggttaatgtttgaggcagaagtcggcatttcggagaactcgagc
accgccacgcgccgtgactggtccgctaatggcagccctcctgcgcctgctgttccaaag
ccccgtcctgcacctcagccctcctcggctctcccccgccccgaggtagagagctcctgc
atggaggtagaggcagctcagaggaaactgcaggagatcgaagacagaataacactggaa
gatgacgatgaggatgaagatctggatttagagccagccccgaggaggcctgtgttggtg
atgtctgacagtttgaaggagggtctacagcgtggcatcagcgacatcctaccgcacaca
gtagcccagtctgtgagccattcctgtatggagctggtgttgtggcgaccacccgacgat
cccttctgtcgcaagcgaaagggcacagtgcagagacagcgtaaacagctgatagtatct
cagcaaccgccaaccccgtgttcatcgcccacccctcccagcgcctccagtcctcctgca
gacccacaatcttctccgtatgtttttcctgtgccccacagctctggcgtggaggacatg
gaaatgtag
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