Pungitius pungitius (ninespine stickleback): 119224948
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Entry
119224948 CDS
T07626
Symbol
cdhr5a
Name
(RefSeq) cadherin-related family member 5
KO
K16505
cadherin-related family member 5
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppug04515
]
119224948 (cdhr5a)
Cell adhesion molecules [BR:
ppug04515
]
Cadherins
Cadherin related
119224948 (cdhr5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
119224948
NCBI-ProteinID:
XP_037338337
LinkDB
All DBs
Position
4:complement(23462062..23470941)
Genome browser
AA seq
697 aa
AA seq
DB search
MELTRRRQPADAVLGCVLAACLCAACGAERLCTVPPGPVTVPENNTADVELVRIVSGAEV
ALRVTVNPEDLFYLKGNALMVKKGLDFESLHSVALTVWVQCSKGGSRSVNESVEVLVENE
NDNPPNFAQSHYVLEVNELTPVNSSVGLIEASDVDSEPLYYRLEPATDKYFRLENINTPK
IIVKSILDYDVVQKISLVLHVQDTLDGSASDRPFFTSVATITVQVRDVDNRPPWFQPCLR
TSSGIAKLCVSTGYRGKVNLTEKEDGPLVLEPGPVFAKDGDKNRSEQIVYRILRGNEGNI
FQIDEETGNISMAKAADIVGPITLTVLASQVTNRDQFSVTQVTFDVMKKSRNPPRFEKER
YEGFIYSNSVPESMILRDRSTNRPFRVRARDEDFAAGANPDLKYEVQYSSYVNVTSDGFV
VLKRVVKTESFALQLRAVDATTGEFGTAALSVQVIPAVATPSPSSVGFRPGDMALLGLVM
AALLVLCLIVIGFLVSRLWKGNAGVDKICDCLGPCLKSARSGHRDSLQYTNDGFQTEGDP
SRGGGGRRLTNGPPGRGAFPQARGRVLPMERRGRQCSSCGVHTNHVAKGSPSPRRLGGDG
GEEYAKRVALNRQRRKEGQKTVWFKESEDSSDIEVEIIPDTVSPVEEETEEELGMEGVVR
DPAAPLREPEEVRSAEERDHGNAGSGKEKGGQEEEEG
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggaactgacacggaggagacaacccgcggacgctgtcctcgggtgcgtcctcgccgcc
tgcctctgcgcggcctgtggggcagagagactgtgcacggtgcctccgggccccgtcacg
gtgccggagaacaacacggccgacgtggagctggtgaggatcgtctcgggggccgaggtc
gcgctgagggtcacggtcaacccggaggacctgttctacctgaaaggaaacgccctgatg
gtcaagaaaggactggacttcgagtcgttgcacagcgtggctctgaccgtgtgggtgcag
tgcagcaaaggaggctccagatctgtgaacgagtccgttgaggttttggtcgagaacgag
aacgacaaccctccgaacttcgcccaaagccactacgtcctggaagtgaacgagctcact
ccagtgaactccagcgtggggctgatagaagcatccgatgtggactccgagccgctctac
tatcgcttggagccagcaacggataaatacttccgtctggaaaacatcaacactccaaag
ataattgtgaagagcatcctggactacgacgtcgtgcagaagatctccctggttctacac
gtgcaggacacgctggacggctcggcctctgaccggcctttcttcacgtccgtggccacc
atcacggtgcaggtgagggacgtggacaaccggcctccctggttccagccgtgtctgagg
accagctcgggcatcgcaaagctgtgcgtgagcaccggctacagaggcaaagtcaatctc
accgagaaggaggacgggccgttggtgctggagcccggtccggtgttcgccaaggacgga
gacaagaaccgcagcgagcagatcgtctacagaatccttcgaggaaatgagggaaatatt
ttccagattgacgaggagacgggaaacatctcgatggctaaagccgccgacatcgtcggc
ccaataactctcactgttctggcgtcgcaggtcaccaacagagatcagttctcggtgacg
caggtgacctttgacgtgatgaagaagagccgaaaccctcctcgcttcgagaaggagcgg
tacgaagggttcatctacagcaactccgtccccgagagcatgatcctccgggaccggagc
accaaccggcccttcagggtccgggctcgggacgaggatttcgccgccggcgccaatcca
gatctgaagtacgaggtccagtacagcagctacgtcaacgtgacctcggacgggttcgtg
gtcctgaagagagtcgtgaagacggagtccttcgcgcttcagctgagagccgtggacgcg
accacgggggagtttgggactgcagcactctctgttcaggtcataccagcggtggccacg
ccgtccccctccagcgtgggcttccggccgggcgacatggcgctgctggggctggtcatg
gcggcgctgctggtgctctgcctcatcgtgatcggcttcctggtctcccgcctgtggaag
gggaacgccggcgtggacaagatatgcgattgcctgggcccctgcctgaagtcggcccgg
tccggccaccgggactctctgcagtacaccaacgacggcttccagaccgagggcgacccg
agccgcggggggggcggcaggcgcctgacaaacggcccgcccgggcggggcgccttccct
caggcgcgaggccgggtcctccccatggagaggcggggtcgccagtgctcctcctgcggc
gtccacaccaaccacgtcgccaaggggagcccctcgccccgcaggctcggtggggacggg
ggcgaggagtacgccaagcgggtcgccctgaaccggcagaggaggaaggagggccagaag
acggtgtggttcaaggagagcgaggactcctccgacatcgaggtggagatcatcccggac
accgtgagcccggtggaggaggagacggaggaggagctgggtatggagggcgtggtcagg
gacccggcggcgccgctcagagagcccgaggaggtccggagcgcggaggagcgggaccat
gggaacgccggctcgggaaaagagaagggaggccaggaggaggaggagggctga
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