Pungitius pungitius (ninespine stickleback): 119225058
Help
Entry
119225058 CDS
T07626
Name
(RefSeq) zinc finger SWIM domain-containing protein 6-like
KO
K25704
zinc finger SWIM domain-containing protein 6
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ppug03037
]
119225058
Cilium and associated proteins [BR:
ppug03037
]
Other cilia and associated proteins
Stereociliary proteins
119225058
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
ZSWIM_N
TPR_ZSWIM8
Orai-1
Motif
Other DBs
NCBI-GeneID:
119225058
NCBI-ProteinID:
XP_062418147
LinkDB
All DBs
Position
5:2133187..2154696
Genome browser
AA seq
994 aa
AA seq
DB search
MAERVQQPPAKRLCCRPGYNPACRQGQRAGGVLCGGAGSAPGGSGSGKTHNPESLLDIAA
RRVAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSEKEICMYSSFNAGGEESGTSGDNND
ETQLPFLRGVTLLEGGWVDNVLQVVALCANHVCVCVCVCVYVTALLVSSHLLLQVREMLK
MRDSNGARMLTLITEQFMADPRLALWRQQGTTMTDKYRQLWDELGALWMCIVLNPHCKAE
QKSSWLRQLRRWNSVDVCPWEDGNHGNELPNLTHSLPQGAHGNQEMRPHRTVFTRAIEAC
DLHWQDRHLQHIIASDLYANYCYHDNQEGSLFDTRGWPLWHEHVPTACARVDALRSHGYP
REALRLAIAVVNTLRRQQQRQLEHFRRHKKELLHKGHTSITNMEGWVGHPLDPIGTLFST
LTESGRGGEEGSNTCLDLSDCSSVVSRAELQRMPVQRLLGDGESYAALAVETALIGLGQQ
RVMPDGLYAQEKVCRNEEQLLAKLQEVELDDSLVKIFRKQAVFLLEAGPYSGLGEIVHRE
SVPMHTFARYLFTSLLPHDAELAYKIALRAMRLPVLESTASSGDLSRPHHIVSVVPNRYP
RWFTLSHIESQQCELASTMLTAAKGDSRKLETVLESIQKNIHSSSHIFKLAQDAFKIATL
MDSLPDITLLKVSLELGLQVMRITLSTLNWRRREMVRWLVTCATEVGVYALDSIMQSWFT
LFTPTEATSIVATTVMSNSTIVRLHLDCHQQENLASSARTLALQCAMKDPQNCALSALTL
CEKDHIAFETAYQIVLDAAATGMSYTQLFTIARYMEHRGYPMRAYKLATLAMAHLNLSYN
QDTHPAINDVLWACALSHSLGKNELAAVIPLVVKSVKCATVLSDILRRCTLTTPGMVSAL
HSRRTSGKLMSLDKAPLRQLLDATIGAYINTTHSRLTHISPRHYSEFIEFLGKARETFMM
AHDGHIQFTQFIDNLKQIYKGKKKLMMLVRERFG
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcgagtccagcagcccccagccaagcggctctgctgcaggcccggctacaac
ccggcgtgcaggcaggggcagcgggctggcggagtcctgtgtggcggcgcggggtccgct
ccgggcgggtcggggagcggaaaaacgcacaacccggagtcgttgctcgacatcgcggcg
cgccgagtcgcggagaagtggccgttccagcgggtggaggagcggttcgagaggatcccg
gaacccgtccagcggaggatcgtatactggtctttcccgaggagcgagaaggagatctgt
atgtactcctctttcaacgccggaggagaggaaagtggaactagcggggacaataatgac
gagacccagctgcctttcctacggggtgtcactctgctggagggtggctgggtggacaac
gtattgcaagtcgtcgctctttgtgcaaaccacgtgtgtgtgtgtgtgtgtgtttgtgtg
tatgtaacggccctccttgtctcctcccatctcctcctgcaggtgagggagatgctgaag
atgcgtgactccaacggagcgaggatgttaacactgatcacagaacagttcatggctgac
cctcggctggcgctgtggagacagcagggcaccaccatgaccgacaagtacagacagctc
tgggacgagctaggtgccctgtggatgtgcatcgtactaaacccccactgcaaggcggag
cagaagtcatcatggctgcgccagctgcgcagatggaacagcgtggacgtctgtccctgg
gaggacggtaaccacggcaacgagctgcccaacctcacccactcactgcctcagggtgcc
catggcaaccaagagatgcgcccccacaggaccgtgttcacgcgggccatcgaggcctgc
gacctgcactggcaggaccgacacctccagcacattattgccagcgacctctatgccaac
tactgttaccatgacaaccaggagggctccctctttgacacgcgcggctggcccttgtgg
cacgaacacgtcccgacggcctgcgccagggtggacgcgctgcgctcgcacgggtacccg
cgagaggccctgcggttggccatcgccgtggtgaacacgttacggcggcagcagcagagg
cagctggagcacttccgccgacacaagaaagagttgctccataaaggccatacctccata
accaacatggagggctgggtggggcacccactggatcccatcggtaccctgttcagcacc
ctgactgagtcaggacgagggggagaggagggctcaaacacctgcttagacctctcagac
tgctccagcgtcgtgagccgggccgagctccagcggatgcccgtgcagcggctgctgggc
gacggcgagtcgtacgcggcgctggcggtggagacggctctgatcggcctcggccagcag
cgggtgatgcccgacgggctgtacgctcaggagaaggtgtgtcgcaacgaagagcagctg
ctggccaagctgcaggaagtggagctggacgactcgctggtcaaaatcttccgtaaacag
gccgtctttctgctggaggccggtccgtactctggcctcggagagatcgtccacagagag
agtgttcccatgcacaccttcgcccgctatctcttcacctccctcctacctcacgacgct
gaactggcgtacaaaattgcactgagagccatgcggttgcccgtattggagtcgacggcc
tcgtccggcgacctgtcgcgaccccaccacatcgtgtcggtggtgcccaaccgctacccg
cgctggttcaccctgagccacatcgagtctcagcagtgtgagctggcctccaccatgctc
actgccgccaaaggggacagtcgcaagctggagacggtcctggagtccatccagaagaac
attcactcctcgtctcacatcttcaagctggcacaagacgccttcaagatcgccactctg
atggacagcctgcctgacatcacgctactcaaagtctcgctggagctgggactgcaggtg
atgagaataactctgtccacattgaactggaggaggagagagatggtgcgctggttagtc
acgtgtgccactgaagtgggtgtgtacgcgctggacagcatcatgcagagctggttcacc
ctcttcacccccaccgaggccaccagcatcgtggccaccaccgtcatgtccaacagcacc
atcgtccgcctccacctggactgccaccagcaggagaacctggcctcgtcggcccgcacc
ctcgccctgcagtgcgccatgaaggacccccagaactgcgccctctccgcgctgaccctc
tgtgaaaaggaccacattgccttcgagacagcctaccagattgtactggacgcggcggcg
acggggatgagctacacgcagctgttcaccatcgcgcgctacatggagcaccgcggctac
ccgatgcgggcgtacaagctggcgacgctcgccatggcccacctgaacctcagctacaac
caggacacgcacccggccatcaacgacgtgctctgggcctgcgcgctcagccactcgctg
gggaagaacgagctggccgccgtcatccccctggtggtcaagagcgtgaagtgcgccacc
gtgctctcggacattttgcggcggtgcacgctgaccacgccggggatggtgtcggcgctg
cacagccgcaggacctccgggaagctcatgtcgctggacaaggcgccgctcaggcagctg
ctggacgcgaccatcggggcgtacatcaacaccacgcactcgcggctcacgcacatcagc
ccgcgccactacagcgagttcatagagttcctgggcaaggcgcgggagacgttcatgatg
gcgcacgacggacacatccagttcacccagttcatagacaacctgaaacagatctacaag
ggcaaaaagaaactaatgatgctggtgagggagcggttcggctga
DBGET
integrated database retrieval system
