Pungitius pungitius (ninespine stickleback): 119225063
Help
Entry
119225063 CDS
T07626
Symbol
adamts13
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X1
KO
K08627
a disintegrin and metalloproteinase with thrombospondin motifs 13 [EC:
3.4.24.87
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppug01002
]
119225063 (adamts13)
Enzymes [BR:
ppug01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.87 ADAMTS13 endopeptidase
119225063 (adamts13)
Peptidases and inhibitors [BR:
ppug01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
119225063 (adamts13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_CR_3
ADAMTS_spacer1
TSP_1
ADAMTS_CR_2
Reprolysin
Reprolysin_5
Reprolysin_3
Adt-1
TSP1_spondin
Reprolysin_2
Reprolysin_4
TSP1_CCN
TSP1_CFP_C
Peptidase_M10
Motif
Other DBs
NCBI-GeneID:
119225063
NCBI-ProteinID:
XP_037338597
LinkDB
All DBs
Position
5:16741129..16751340
Genome browser
AA seq
1368 aa
AA seq
DB search
MFFTGLLCLLLLRPGPAAPLQEHFHHSPSQRDVLSSPEASVSGRLRRWAPMPDVTHLELL
VVVGPDVQRFHKQDTERYILTNLNIASELLRDTALGANMRVHLVRMIILSEPEPEIQMSP
NITSSLRSVCDWGRRINPSNDTDPLHADLLLYITRYDLLLPDGNNQVRGVAQLGGACSSD
WSCVITEDTGFDLGITITHEIGHSFGINHDGVGNTCSKSGFMMASDGGYNSVDLTWSPCS
RQQLLTFFSEGKAECVKDLPVLGGSLQDWKPGLYYGVDDQCRIAFGSTARACSFTDPDLP
ACRVLSCHINPDDNSSCKRLLIPLLDGTECAPNQWCLKGRCVSSDELGSSVVVHGSWSNW
SGFSPCSRTCGGGVTHRRRKCNNPRPAFGGNDCEGSDVEAELCHRQPCENTQLDFVADQC
SQTDLHPLYLLPNTASFYTWIPAIGFVQGDDQCRYLCQSKGENFMVSRGSQFVDGTRCES
DRTPLFGTTAACLSGKCQLFGCDGLLHSGKVRDVCGVCGGDASSCSLTSDSYAGGQARVT
FFAEYTTFLSLPVNATQVHVVNRAPLFTHMAVIVGDRYVVSGMGEMALTTTHPSPLDDNR
LEYSLHLTPDLLPAMEELFLPGPLSEEISVQVYRKYGKEYGEKTNPNISYHFYVPLRSSN
VTESSPKGKWAVFTTPCSVSCGSGVQKQVYVCVDEGNNKHLEEHNCETPPPPKQLHTTCQ
LSRCPPSWDTGAFGPCSASCGGGERVRPVRCVQRHGAAVTKVSDAECSPHTAPDAGEKCN
LQRCPARWRVSEPGECLAVCGPGEARRNVSCVRPEGGRDVEVDDMFCSSAIKPTDYVPCV
VDVCPIGWQFKGEEQPVLNSAASPRSKQAPVYVWSPVTSQCSKTCGNGTLQAWFSCLEHQ
TRLNVTDLHCDTSTRPLPQTKTCNTTPCPPMWRSMQGVCSVTCGGGVANRVLYCAIETEG
EEEEVVVEDSECNEFPRPTAVVACNNHRCPARWTVVSSSPCSASCDLGVAQRTVSCVQFF
HGKEIVVPEESCLAAAKPATAGPCLLQVCTFRWDVTPWSQCSVPCGYGIQSRAVSCMGPS
KPGPLSPLFCMHMPKPITIQGCYLGGCLVSTSDVPHVTSEHPSDRLSPSATDPILLPQAT
TTTVPTPIPSACGQLLLEESGTLDLKDVSGLCTVSIGRPLDEVIHIRVESGSLNCMKKLD
FVAFFDRLAFVRKCEQVVGSELTTRTNVLLVRQKLQTPGNGVVLTYNSQKNPKKNHHQDC
DIQLFSPTGVFENPTTSNTNHTCRVLINAPPSVKIRIQALHIGSGSNANVSQATYIMIRD
MNVLTTNVFKGPQLFQWQSSGNMAEIEFHGGHLHSKGSFRAKYSFIHI
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgttttttacgggcctgctctgcctgctgctcctgcggcccggcccggccgctccattg
caagagcattttcatcactcccccagtcaaagagacgtgctttcatccccggaggcctca
gtgagcgggcgtctgcgtcgctgggccccgatgcccgatgtaacacacctggagctgctg
gtggtggtcgggcccgatgtccagcggttccacaagcaggacacggagcgctacatcctc
accaacctcaacatcgcctcagagcttttaagggacacggcgctgggtgccaacatgagg
gtgcacctggtccgcatgatcatcctgtcggagccagagccagagatccaaatgtccccc
aacatcacctcctctctcagaagtgtgtgtgactggggcagaaggatcaacccctccaac
gacacagacccactacacgccgatctgctgttgtacatcacacggtacgacctgttgttg
cctgatgggaataatcaggtcaggggtgtagcgcagctgggtggggcttgctccagtgac
tggagctgtgtgatcacagaggacacaggctttgacctgggcatcaccatcactcatgag
attggccacagttttggaatcaaccatgacggtgtaggaaacacctgcagcaagagtggc
ttcatgatggcctctgacggaggctacaacagtgtggatctgacctggtctccctgcagc
cgacagcagctgctcacgttcttcagcgaaggtaaagcggagtgtgtaaaggacctgcct
gtgctgggaggctctctacaagactggaagccgggtctatactacggagtcgatgaccaa
tgccgtatagcttttggtagcactgcgagagcctgctctttcaccgaccctgacctgcca
gcttgtcgagtcctgtcctgtcacattaaccctgatgataacagctcctgcaaacgcctc
cttatccctctgctggatgggacggagtgtgcacctaaccagtggtgtctgaaggggcgt
tgcgtctcctcagatgagctcggctcttctgtggtggtgcacggctcctggtccaactgg
tccgggttctccccttgctcgcggacatgtggcggcggggtcactcaccgcaggcgtaaa
tgcaataacccaagacctgctttcggagggaatgattgtgagggatccgatgttgaggct
gaactttgtcaccggcaaccatgcgagaacacacagctggattttgtagcagatcagtgc
tctcaaacagacctccacccgctctacctgctgccaaacaccgcctccttctacacctgg
atccctgccataggctttgtgcaaggagatgaccagtgcaggtatttgtgccaatcaaaa
ggagaaaacttcatggtgagccgtggctcccagtttgttgatggcactcgctgcgagtct
gacaggacgcctctttttggcaccacagctgcttgtctaagtggaaaatgccagctgttt
ggctgtgacggcctgctgcactctgggaaagtgagggacgtgtgcggggtgtgtggtgga
gatgcgtcgtcctgcagtttgacctccgactcctacgctggcggccaggccagagttacc
ttttttgcagagtataccactttcctgtctctgccggtgaatgccacgcaggttcatgtc
gtcaacagggcacctctcttcactcacatggctgttattgttggggatcggtacgttgtg
tccgggatgggcgagatggcactaacaacgacccatccctccccattggatgataaccgc
cttgagtactccctccacctgacccctgaccttttaccagcgatggaggagcttttcctg
ccagggccgctgtcagaagagataagcgtacaggtctatcgcaaatatggaaaagaatat
ggggagaaaacgaatccaaacattagctaccacttctatgtacctctcagaagcagcaac
gtgacagaaagctcacccaagggaaaatgggctgtcttcacaacaccctgctctgtctcc
tgtggatcaggtgtgcagaagcaggtttatgtctgtgtagatgaaggcaacaacaagcat
ttggaagaacacaattgtgaaacccctcctccacccaaacagctccacacaacctgtcag
ctgtcccgctgtccccccagctgggacacgggggcgttcgggccttgtagtgcgtcctgc
ggtggaggagagagagtgcgtcctgtacggtgcgttcaaagacatggagccgctgtgacc
aaggtctcagacgctgaatgctcgccgcatacggccccggacgctggtgaaaaatgcaac
ctccaacgctgtcctgccagatggcgagtgtcagagccaggggagtgtttggcagtgtgc
gggccaggggaagcaagacgcaatgtgtcatgtgtccggccagaaggcggccgagatgtt
gaagtggatgatatgttttgttcttcggcgatcaaaccgactgattatgtgccctgtgtg
gtagatgtttgtcccattggatggcaatttaagggagaggagcaaccggtgctcaattct
gctgcgtcaccccgctctaaacaggctcctgtgtatgtgtggagtcctgttaccagccag
tgctcaaagacgtgtggcaatggaaccctacaggcgtggttctcctgcttggaacaccag
accagactcaatgtgacggacctccactgtgatacttcgaccagacctcttcctcagact
aagacctgcaacacaacaccctgcccccccatgtggcgctctatgcaaggagtctgcagt
gtgacatgtggaggaggggtggccaacagggtgctgtactgtgctatagaaacagaaggg
gaggaggaggaggtggtggtggaggattcggagtgcaatgagtttcccagacccacagca
gtggttgcatgtaacaaccaccgctgcccagcaaggtggacggtagtcagctcatcgccc
tgctcagcgtcctgtgatctgggtgtagctcagaggactgtgtcttgtgtgcaatttttt
catggaaaggagattgtggtgccggaggagagctgccttgcagcagcgaaaccggccacc
gcagggccctgcctgctgcaggtctgcaccttccgatgggacgtgacaccctggagccag
tgttccgtaccgtgtggatacgggatccagtccagagccgtgtcctgcatgggaccctct
aagccggggcccctcagccctctgttttgtatgcacatgcctaaacccataaccatccag
ggctgctatttgggcgggtgccttgtgtccacctcagatgtccctcacgttacatcagag
cacccctcggatcgtctttctccaagtgcaacggatccaatcctcctaccacaggccacg
actacaaccgtccccacacctatacccagtgcatgtggacagctgctcctggaggaatcg
ggcacgctggatttgaaagacgtgtccggcctctgcacagtatccataggtcgacccctc
gatgaggtcattcacattagagtggagtctggctctttgaactgcatgaaaaagttagac
tttgttgcattttttgaccgactggcgtttgtgaggaagtgcgagcaggtagtgggaagt
gaactcacaaccagaaccaacgtcctgctggtgcgtcaaaagctgcaaacccctggaaac
ggggtggtgttaacctacaattcacagaagaaccccaagaagaaccaccatcaggattgt
gacattcagctgttctctccaaccggtgtctttgagaatccaacaacgtccaacactaac
cacacctgccgagtgctcatcaacgcccccccatcggtcaagatcagaatccaagctcta
cacatcggctcagggtccaacgccaacgtctcccaggcaacgtacatcatgatccgggac
atgaatgtcttaacgaccaatgtgtttaagggcccacagctgttccagtggcagtcctct
ggaaatatggctgagattgaatttcatggaggccacctgcattcaaaagggagcttcaga
gccaaatattcctttattcatatttga
DBGET
integrated database retrieval system
