Pungitius pungitius (ninespine stickleback): 119225071
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Entry
119225071 CDS
T07626
Symbol
sox6
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119225071 (sox6)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
119225071 (sox6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
119225071
NCBI-ProteinID:
XP_037338617
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
MEGFLRSSFLLSRVMSSKQATSPFASVVDGDDAMSQEHLSWEKEESAEAHGTPQLPLHSL
LHGKTHPEEMQPLSSVPQESDWDSLVSAQQRMESDSNKVCSLYSFRNNSTSPHKPEEGAR
ERSDLLSGSAFGTPERRKGSLADVVDTLKQKKLEEMTKTEQDDSTCMEKLLSKDWKEKME
RLNTSELLAEVKGTPESLAEKEQQLSTMITQLISLREQLLAAHDEQKKLAASQMEKQRQQ
MELARQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGHMPPLMIPIFPHDQRTLAAAAAA
QQGFLFPPGMSYKPGDNYPVQFIPSTMAAAAASGLSPLQLQQLYAAQLASMQVSPGAKMP
PLPQSLNASGPISPSSLKNDKSSSSPITHVKEEGTQPLNLSARPKTTDLVKSPASPTQNL
FLGSKSSPNSLLSKGGLPSPLGGGLSRGSSLDILSSLNSTALFGDQDTVMKAIQEARKMR
EQIQREQLQHHQQGLEAKLSALSSVGLNNCRIDKERAHYESIGHHLGKLGEEGKIGHRVI
DLTRPEDLDGGAGSTEARVFREARGRNNNEPHIKRPMNAFMVWAKDERRKILQAFPDMHN
SNISKILGSRWKSMTNQDKQPYYEEQARLSKQHLEKYPNYKYKPRPKRTCIIDGKKLRIG
EYKQMMRSRRQEMRQFFTVGQPPQIPITTSTSMVYPGAITMATTTPSPQMTSECSSASAS
PEPSIPVIQSTYNMKLEPNTMANNSVPVNGVDEMDMYEDFEDEPKSDYSSENDTHEPVSA
N
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggagggctttcttcgtagcagctttttactgagcagagtgatgtcttcaaagcaagcc
acgtctccgttcgcctccgtcgtcgatggggacgacgccatgagtcaggagcacttgtct
tgggagaaagaggagagtgccgaggcccatggcactccgcagctgcccctgcacagcctg
ctccatgggaaaacccatcccgaggaaatgcagccgctcagcagcgtgccgcaggagagc
gattgggacagcctggtgtcagcccaacagcgcatggaatctgacagcaataaagtatgt
tccctgtactccttccggaacaattccacttcaccacacaagccggaggagggggcgcgg
gagcgaagtgacctgctgagcggatcagcttttggaactccggagcgccgcaaaggaagc
ctggcagacgtagtggacacgctgaagcagaagaaactggaggagatgacaaagacagag
caagacgattccacatgcatggaaaaacttctttccaaagactggaaagagaagatggag
aggctcaacacaagtgaactactggcagaagtgaaaggcactccggagagcctggcagaa
aaggaacagcagctctccacaatgatcacccagctgatcagcctgcgagagcagctcctg
gctgcccacgacgaacagaagaagctcgccgcctcacagatggagaaacagaggcagcaa
atggagctggctcgtcagcagcaggagcagatcgcgagacagcagcagcagcttctgcag
cagcagcacaaaatcaacctcctccagcaacagatccagcaggtccagggtcacatgcct
ccgctcatgatccccatttttccacacgaccaacgtactctggcagcagcagccgccgcc
cagcaaggatttctcttccctccgggaatgtcttataagccaggtgataactaccctgtg
cagttcattccatccacgatggcagctgcagcagcgtcaggactcagcccccttcagctc
cagcaactgtatgccgcccagcttgccagcatgcaggtctctcctggagccaagatgcct
ccactcccccagtccctcaatgccagtgggcccatttctccctcttctctgaagaacgac
aagagttcctccagtcccatcactcacgtaaaggaggagggaacacagccgctcaacctg
tctgctcggccaaagacgacggacctggtgaaatcccccgcgtcgccgacacaaaacctg
ttcctcggaagtaaaagcagccccaacagtctgctgagcaagggcggtctccccagcccg
ctcggaggaggcctcagccggggctcatctctggatatcctgtccagcctaaactcgacc
gcgttgttcggggaccaggacactgtgatgaaggccatccaggaggctcgcaaaatgaga
gagcagatccagagggaacagctgcaacatcaccagcagggcttagaggcaaagctgtcc
gccctcagttcagtgggcctcaacaactgcagaattgacaaggagagggcgcattatgag
agcatcggccaccaccttggcaagctgggtgaggaggggaagatcggccacagagttatt
gacctcaccaggccagaggatcttgatggaggtgccggatccacggaggcacgggtcttc
agggaagctagaggaaggaacaacaacgagccccacattaaaaggccaatgaatgcattc
atggtgtgggccaaggatgagcggcgtaagatactccaggccttccctgacatgcacaac
tccaacataagcaagattttgggctcccggtggaagtctatgaccaaccaggacaagcag
ccatactatgaggagcaggcccgtctgagcaagcaacacctggagaagtacccaaactac
aagtacaagccgcggccaaagaggacctgcattatcgacggaaaaaaacttcgcatcgga
gagtacaagcagatgatgcgctcacggcgacaagagatgaggcagttcttcactgtggga
cagccaccccagattcctatcaccaccagcactagtatggtctatcccggggccatcacc
atggctaccaccacaccctcacctcagatgacatcagagtgctcgagtgcctcggcgagt
cccgagccatccattcctgtcatccagagcacctacaacatgaagctagagcccaacacc
atggcaaacaacagtgtgccggtcaacggggtggatgagatggacatgtacgaggatttt
gaggatgagcccaaatcagactatagtagtgaaaatgacacacacgagccggtcagcgcc
aactga
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