Pungitius pungitius (ninespine stickleback): 119225145
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Entry
119225145 CDS
T07626
Name
(RefSeq) NLR family CARD domain-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ppug04054
]
119225145
Pattern recognition receptors [BR:
ppug04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
119225145
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
NLRC4_HD2
FISNA
NACHT
NOD2_WH
LRR_4
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
119225145
NCBI-ProteinID:
XP_062418527
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All DBs
Position
5:21597933..21612674
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AA seq
1114 aa
AA seq
DB search
MERYESMEDVTNCKDGRRTVDARIPQRPGPGYGPDPEPGPGSGPEPSCVSLKSNQSMENR
IFFKDGRPSVDASSHQQRRKSPEPSCVSMKSDQSKDYPLNFKDGRHSHGPKEEFGTISVQ
FLRRMKQEELAERLQSKLKSNLKKKFQCVFEGIAKAGNPSILNEIYTELYITEGGTAEVN
EEHEVRQIETASRKPAGPETTIRQEDLFKASAGGEEPIRTVMTKGVAGIGKTVLTQKFTL
DWAEDKDHQDIQFTFPFTFRELNVLKKKFSLVGLVHHFFSEARAAGICRFEEFQVVFIFD
GLDECRLPLDFHNNEILTDVTETSSVDVLLTNLIRGKLLPSAHLWITTRPAAANQIPPEC
VGMVTEVRGFTDPQKEEYFRKRFRDEEQACRIISHIKTSRSLHIMCHIPVFCWITATVLE
VELKTREGGELPKTLTEMYIHFLVVQSKVKKVKYDGGAETDPHWSPESRKMIESLGKLAF
DQLQKGHLIFYESDLTECGIDIKAASVCSGVFTQIFREESGLYQDKVFCFVHLSVQEFLA
ALHVHLTFISSRVNLLLGKKERNKPKRLYQSAVDQALQSPNGHLDLFLRFLLGLSLKTNQ
TLLQGLLTQTGSLSLSNQRTVQYIKEKISENVSPEKSINLFHCLNELNDVSLVEEIQLSI
SSGRLSTDELSPAQWSALVFILLSSEEDLEVFDLKKYSASEEALLRLLPVVKASNKALLS
GCNLSQRSCEALSSVLSSQSSSLRDLDLSNNNLQDSGVKLLSAGLKSPHCDLETLRLSGC
LITNEGVASVASALSSNPSNLRDLDLSNNDLQDSGVKLLSVGLKSPHCDLETLRLSGCLI
TEEGFASVASALSSNPSHLRELDLSYNHPGDSGVKLLSAGLKDPHWRLETLRVEPAGVRW
LRPGLRKYSCELTIDTNTVNRRLKLSDNNRKVTRVKEVQSYPDHPDRFDYWPQLLCRTGL
TGRCYWEVEWRRGVDVSVSYRGIRRKGNSDACLFGYNDQSWSLRRSDKGYYVCHNKTETP
ITSSSSSSGRAAVYVDCPAGSLSFYRVSSDTLIHLHTFSTTFTEPLYPGFFLCPGSSVSV
CPLQDGESPPGGEPSSLQEGESPPGGEPSSLLTT
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atggagcggtacgagtctatggaggatgttacaaactgcaaagatggacgccgcactgtt
gatgcaaggatccctcagagacctggacctggatatggacctgatcctgaacctggtcct
ggatcaggacctgaaccaagctgtgtgtccttgaagagtaaccagtccatggagaatcgt
atattcttcaaagatggccgtccctctgttgatgcaagttcacatcagcagagaagaaag
tctcctgaacccagctgtgtgtccatgaagagtgatcaatctaaagattatcctttaaac
ttcaaagatggacgtcattctcatggcccaaaagaggaatttgggacgatctcagtgcag
tttctgaggagaatgaagcaggaggagctggctgagcgtctgcagagcaaactcaaatcc
aacctgaagaagaagttccagtgtgtgtttgagggcatcgctaaagcaggaaacccaagc
attctgaatgagatctacacagagctctacatcacagagggagggactgcagaggtcaat
gaagaacatgaggtcagacagattgaaacagcatccaggaaaccagccggaccagaaaca
accatcagacaagaagacctcttcaaagcctcagctggaggagaggaaccaatcagaaca
gtgatgactaagggagtggctggcattgggaaaacagtcttaacacagaagttcactctg
gactgggctgaagacaaagaccaccaggacatacagttcacatttccattcaccttcaga
gagctgaatgtgctgaagaagaagttcagcttggtgggacttgttcatcacttcttcagt
gaagccagagcagcaggaatctgcaggtttgaagagttccaggttgtgttcatctttgac
ggcctggatgagtgtcgacttcctctggacttccacaacaatgagatcctgactgatgtc
acagagacctcctcagtggatgtgctcctcacaaacctcatcagggggaagctgcttccc
tccgctcacctctggataaccacacgacctgcagcagccaatcagatccctcctgagtgt
gttggcatggtgacagaggtcagagggttcactgacccccagaaggaggagtacttcagg
aagaggttcagagatgaggagcaggcctgcaggatcatctctcacatcaagacctcaaga
agcctccacatcatgtgccacatcccagtcttctgctggatcactgctacagttctggaa
gtggagttgaagaccagagagggaggagagctgcccaagaccctgactgagatgtacatc
cacttcctggtggttcagtccaaagtgaagaaggtcaagtacgatggaggagctgagacg
gatccacactggagtccagagagcaggaagatgatcgagtctctgggaaaactggccttt
gatcagctgcagaaaggccacctgatcttctatgaatccgacctgacagagtgtggcatc
gatatcaaagcagcctcagtgtgctcaggagtgttcactcagatctttagagaggagagc
ggactgtaccaggacaaggtgttctgcttcgtacatctgagtgttcaggagtttctggct
gctcttcatgtccatctgaccttcatcagctctcgtgtcaatctgctgttaggaaaaaaa
gagagaaacaaaccaaaacgtctctaccagagtgctgtggaccaggccttacagagtcct
aatggacacctggacttgttcctccgcttcctcctgggtctttccctgaagaccaatcag
actctcctacaaggtctgctgacacagacaggaagtctctcactcagcaatcagagaaca
gtgcagtacatcaaggagaagatcagtgagaatgtgtctccagagaaaagcatcaatctg
ttccactgtctgaatgaactaaatgatgtttctctagtggaggagatccaactgtccatt
agttcaggacgtctctccacagatgaactgtctcctgctcagtggtcagctctggtcttc
atcttactgtcatcagaagaagatctggaggtgtttgacctgaagaaatactctgcttca
gaggaggctcttctgaggctgctgccagtggtcaaagcctccaacaaagctctactgagt
ggctgtaacctctcacagagaagctgtgaagctctgtcctcagtcctcagctcccagtcc
tctagtctgagagatctggatctgagtaacaacaacctgcaggattcaggagtgaagctt
ctgtctgctggactgaagagtccacactgtgacctggagactctcaggctgtcaggctgt
ctgatcacaaatgaaggcgttgcttctgtggcctcagctctgagctccaacccctccaac
ctgagagatctggacctgagtaacaacgacctgcaggattcaggagtgaagctgctgtct
gttggactgaagagtccacactgtgacctggagactctcaggctgtcaggctgtctgatc
acagaggaaggctttgcttctgtggcctcagctctgagctccaacccctcccacctgaga
gagctggacctgagctacaaccatccaggagactcaggagtgaagctgctttctgctgga
ctgaaggatccacactggagactggagactctcagggtggagcctgctggagtccgatgg
ttgagaccaggtctgaggaagtattcctgtgaactcacaatcgacacaaacacagtaaac
agaagactcaaactgtctgacaacaacaggaaggtgacacgtgtgaaggaggttcagtca
tatcctgatcatccagacagatttgactactggcctcagctgctgtgtagaactggtctg
actggtcgctgttactgggaggtcgagtggagaagaggagttgatgtatcagtgagttac
agaggaatcaggaggaaaggaaacagtgatgcctgtttgtttggatacaatgatcagtcc
tggagtctgagacgctctgataaaggttactatgtctgtcacaataagacagaaacaccc
atcacctcctcctcctcctcctctggtagagcagcagtgtatgtggactgtcctgctggc
tctctgtccttctacagagtctcctctgacacactgatccacctccacaccttcagcacc
acattcactgaacctctttatcctgggttctttctctgtcctggttcctcagtgtctgtg
tgtcctctgcaggacggagagtctcctcctggtggagaaccttcctctctgcaggaggga
gagtctcctcctggtggagaaccttcctctctgctcaccacatag
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