Pungitius pungitius (ninespine stickleback): 119225174
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Entry
119225174 CDS
T07626
Symbol
smyd3
Name
(RefSeq) histone-lysine N-methyltransferase SMYD3 isoform X1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug00310
Lysine degradation
ppug01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
119225174 (smyd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppug03036
]
119225174 (smyd3)
Enzymes [BR:
ppug01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
119225174 (smyd3)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
119225174 (smyd3)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
119225174 (smyd3)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
TPR_12
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
119225174
NCBI-ProteinID:
XP_037338773
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Position
4:16315505..16364297
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AA seq
432 aa
AA seq
DB search
MPPKLTRFVSPGKGNGLRATVRIGRGELVYSAEPLACCVSNKLARDVCHHCFSRRENLLR
CSQCKMARYCNITCQKQAWCGHKRECKCLQSLRPRVPTDSVRLAARLIFALLSPSKSSSE
ELYTLEEHESHLSSMSENKLLGLSQLASMLELYVPDLAQEGASALPPSCREPFSLIAKVT
CNCFTISDGELQEIGVGLYPSLSLLNHDCGPNCVMVFVGTKLQLRAVRDINPEEELTISY
IETLSPTEERRRQLEDQYHFTCRCQHCDSQDKDKLMLSGHKSTWYPLKEALPRLEGLKAE
SDWRALLEGCSHLLTTVGCDVSDENLYKLRITDMAADACIHLGHWEEAVGYGEKTLPVYS
QYFPDPHPVHGVQLVRVGKLQHYLERIEDALDTFKQAHRIMKLTHGDDHPMTADLLMKME
ECRTEIVQFNSR
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctaagctgacgcgcttcgtcagtccggggaaaggtaacggactgcgggcgaca
gtccggatcgggagaggagagctggtgtactccgccgagccgctggcgtgctgtgtgtcc
aacaaactggccagagatgtctgccaccactgcttctcacgacgtgagaacttgttgcgg
tgttcccagtgcaagatggctcgctactgcaatatcacttgccagaaacaagcttggtgc
ggccataagagagagtgtaaatgtctgcaaagcctccgacccagagttcccactgactca
gtccgtctggctgctcgactcatctttgccttgttaagtccctctaagagcagtagtgag
gagctctacaccttggaggagcatgaatcacacctgagttccatgtccgagaacaagcta
ctaggcttgtctcagctggcatccatgctggagctgtatgtacctgacctggcacaggaa
ggggcgtcagcacttccgccttcctgccgagaacccttcagcctgattgcaaaggtcaca
tgtaattgtttcactatcagtgacggagagctgcaagagattggagttgggctgtatcct
agtttatctctgctgaaccatgactgtgggccaaactgtgtgatggtgtttgtgggaacg
aaactgcagctcagggctgttcgggatatcaaccctgaagaggagctgactataagttac
attgagacgttgtcgcctacagaagagcgtcggagacagctggaggaccaataccatttc
acgtgccgctgccagcattgtgactcccaagacaaagacaaactcatgttgtcggggcac
aaatcaacatggtaccctctgaaggaggctttacccagactggagggactgaaagcagag
tcggattggcgagcgttactggagggctgtagtcatctcttaacgactgttggttgcgac
gtgtccgatgagaatctgtataaactgagaatcaccgacatggctgcagatgcttgcatt
cacttgggacactgggaggaggctgtgggctatggagagaaaacacttcccgtatacagc
cagtacttccccgatcctcatcccgtccacggggtccagctggtgagagtcggaaagctg
caacattacctggaacgcattgaggacgctttggacacattcaaacaggcccatcggatc
atgaagctcacccacggggacgatcaccccatgaccgccgatctactgatgaagatggag
gaatgtcgcactgagatcgttcagttcaacagtcgctga
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