Pungitius pungitius (ninespine stickleback): 119225225
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Entry
119225225 CDS
T07626
Name
(RefSeq) DNA repair protein XRCC4-like isoform X2
KO
K10886
DNA-repair protein XRCC4
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
119225225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppug03400
]
119225225
DNA repair and recombination proteins [BR:
ppug03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
119225225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
XLF
DUF8048
Motif
Other DBs
NCBI-GeneID:
119225225
NCBI-ProteinID:
XP_037338847
LinkDB
All DBs
Position
5:12706232..12733631
Genome browser
AA seq
310 aa
AA seq
DB search
MTYCISDWLIQQQSKVEPVNSNNSVSDLRFIQKCHRLDAAVVKPYSTVMSGTVRQITVTP
DPGTAYFLRVDWALDLGAGFTLVLTDGSSAWIGEVSEDEVTREANNVGATEERYVEDLLQ
ALTGSEGGPRGGDKGLYSFNITPDHCHLSYQKICNDTSVRLGSVELQPAPEPLELIREMI
GWSLKHSTYLESKNCQLLEETRALKRAHQRILRELEQQVRDKEMLEGDLYSRFVMVLNEK
KAKIRGLQDAVRQLHQTDEEGKHRERKEQTVQSIHPSQEPTILLPGCDLECHGVSVDRTF
SDEEDGQRKE
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgacgtactgcatctctgattggctgatacagcagcagtcgaaggtggaacctgtcaac
agcaacaatagcgtcagtgatttgagattcatacaaaaatgccatcgtttggacgctgca
gtagttaaaccatacagtaccgtcatgagtggtacagtcagacagattactgtaactcct
gatccaggcaccgcttacttcctgcgagtggactgggccttagacctgggtgccggcttc
acgttagtgctcactgatggctcctcggcttggattggagaggtttcagaagatgaggtg
acaagggaagccaacaacgtgggagccacagaggaaagatatgttgaggatcttctccaa
gcgctaacaggaagcgaaggaggtccgagaggaggcgacaaagggttgtattctttcaac
atcactccagatcactgccatctctcatatcagaagatttgtaacgacacctcggtgcgt
ttgggttctgtggagctgcagccagccccagaaccgctagagctgatccgggagatgatt
ggatggtccctaaagcactctacttatctggagtccaaaaattgccagctgttggaagag
acccgtgcgctgaaacgggcgcatcagagaattctcagagaactggaacagcaggttcga
gataaagaaatgttggagggcgatctgtactcgcgctttgtcatggtgctgaatgagaag
aaggccaagatccgaggcctgcaggatgctgtccgccagctgcatcagacagatgaggaa
gggaaacacagagagagaaaagagcagaccgtccagagcatccatccatctcaggagcca
actattctcctcccaggttgcgatctggagtgccatggcgtctctgtggaccggaccttc
tccgatgaggaggacggacagcggaaggaataa
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