Pungitius pungitius (ninespine stickleback): 119225239
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Entry
119225239 CDS
T07626
Symbol
nr6a1a
Name
(RefSeq) nuclear receptor subfamily 6 group A member 1-A isoform X1
KO
K08561
germ cell nuclear factor
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119225239 (nr6a1a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ppug03310
]
119225239 (nr6a1a)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Zinc finger
Cys4 germ cell nuclear factor
119225239 (nr6a1a)
Nuclear receptors [BR:
ppug03310
]
6. Germ cell nuclear factor
6A. Germ cell nuclear factor receptor
119225239 (nr6a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
119225239
NCBI-ProteinID:
XP_037338865
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All DBs
Position
5:9053330..9118823
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AA seq
484 aa
AA seq
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MEIDKRTNGFDFPERNTDKSVNDFYSDLPLESEKNDGMDDPADQRTCLICGDRATGLHYG
IISCEGCKGFFKRSICNKRVYRCSRDKNCEMSRKQRNRCQYCRLLKCLQMGMNRKAIRED
GMPGGRNKSIGPVQITEEEIERIMSGQEFKEDAPEHTWGNNGDSDHSSPSNGASEGNQPS
PASTLSSNRSVEMNGYTAALREQYINTSMSTHYQILPHLFSYAAQSGLLAPQPRSLYPQS
HPLVLQLVAAEDLAPLATPMLIEDGYKVTQVELFALLCRLADELLFRQISWIKKLPFFCE
LSIEDYTCLLSSTWQELILLSCLTIYSAQIFGDLADVTAKYTPSDDELQGFSEDGMEVME
RLIYLFRKFHQLKISNEEYACMKAINFLNQDIRGLSNISQLEQLNKRYWYVCQDYTEYKY
PHQPKRFPEIMMCLPEIRCIAGKLVNVPLEQLPLLFKAVLHSCKSSLSSYRSGPSPCVTT
SSGK
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgataagaggacgaatggctttgacttcccggagagaaacaccgacaagtcc
gttaacgacttctacagtgaccttccactggagtctgaaaagaacgacggcatggatgat
ccggctgaccagcgtacttgcctcatctgtggagatcgcgccacaggcctgcactatggc
atcatctcctgtgagggctgcaagggcttcttcaagcgcagcatctgcaacaagcgcgtg
taccgctgcagccgcgacaagaactgcgagatgtcgcgtaagcagcgcaaccgctgccag
tactgccgcctgcttaagtgtctacaaatggggatgaatcgcaaagcaatcagggaggat
ggcatgccaggagggaggaacaaaagcatcgggcctgttcagatcacagaggaggagatt
gagaggatcatgtcggggcaggagttcaaggaggatgccccggagcacacatggggcaac
aacggcgacagcgaccacagctctccaagcaacggagcctcggagggcaaccagccgtcc
cccgcctccactctgtcgtccaatcgctctgtggagatgaatggctacacggcggccctc
agggagcagtacatcaatacctccatgtccacgcactaccagatcctgcctcatctgttc
agttacgctgcccagtcaggcctgctggccccccagccccgcagcctctacccacagtcc
cacccactggtgctgcagctggtggctgctgaagacctggcccccctggcaaccccgatg
cttattgaagacgggtacaaagtgactcaggtggagctgtttgctctgctgtgtcgtctg
gcagacgagctgctcttccgccagatttcctggatcaagaagctgccgttcttctgtgaa
ctctccatcgaggactacacctgcctgctgagctccacctggcaggagctgatcctgctc
tcctgcctcactatctacagtgcccagatttttggagacctggctgatgtcaccgccaag
tacacgccgtctgacgacgagctgcagggcttcagcgaggatggcatggaggtgatggag
cggttgatatatctgtttcgcaagttccaccagttgaagatcagtaatgaggagtatgcc
tgcatgaaagccatcaacttcctcaaccaagatatcagaggactgtccaacatctcccag
ctggagcagctcaacaagcgctactggtatgtgtgccaggactacacggagtacaagtac
ccacaccagcccaagcgcttccctgagatcatgatgtgtctcccggagatccgctgcatc
gcaggtaagctggtgaatgtccctctggagcagctccctctcttgttcaaagcagtcttg
cactcctgcaaatccagcctgagcagctacaggagcggtccgtcgccctgcgtgaccacc
tcctccggaaagtag
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