Pungitius pungitius (ninespine stickleback): 119225281
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Entry
119225281 CDS
T07626
Symbol
cspg4ba
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ppug00535
]
119225281 (cspg4ba)
04091 Lectins [BR:
ppug04091
]
119225281 (cspg4ba)
Proteoglycans [BR:
ppug00535
]
Cell surface proteoglycans
Others
119225281 (cspg4ba)
Lectins [BR:
ppug04091
]
C-Type lectins
Others
119225281 (cspg4ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Laminin_G_3
TMEM154
SIT
DUF3377
Motif
Other DBs
NCBI-GeneID:
119225281
NCBI-ProteinID:
XP_037338933
LinkDB
All DBs
Position
5:complement(5952959..5976564)
Genome browser
AA seq
2411 aa
AA seq
DB search
MCGSVCVPTGRTTMDCGLNRREWWLRALLWWSLLVELASGASFYGDGFVQLKASEASDQN
TLRIRFRTSSAGGLLFLAAGQTHYFLLELRAGRLQLKVDLGLGEVVLRSEGGTQLNDLAW
HSVEVRHVLSTVTLTVDKNSHSDKKMSGYNHNLPIFEWLYVGGLGGLDRLYLPRDVVSFR
GCMDEVVFNEHDLVSSLRPYTGFNVHEVSLGCSPQFSATEEDPISFFSSRAYISLPTWNA
QHEATFESIVHTSAKEGIILYNSAREGDFVAVEIQEGLPVAIVGKGGTKTELRSLTFIND
RKWHSMKLHFTSKSLELTVDGEMVKSSISSGSKGLQLRGYLFVGGVDDGTRAEVRKVGLV
SVSGKRVRGGSFKGCLKNIKVNGVTTGLSNAVVSKDISVGCELEIKTEPSTTVSPTSAPL
HNLHFPTPTPPLQMSTLAIGLDRNYGSNFVQLKNLVVQEGSRASLEAKHIKVVLDFKKLG
IRQSQIMFQIQEQPTHGQVRLDVDQDQEENTFSMLDLWHGRVMYIHGGSEEPDDFFMFSM
YSSSRKKVPDYLKSNKLYRYNITVTPTNDAPELSLPEGNLFVLLENSKKRLTTDVLKATD
IDSSYTDLVFSVLGNLNADAGYLEVENNPGEAVTAFSYLDLEELRVFYVHAGVRNSRIVL
RVSDGEKVSNTVVLRVMAVALEYKIANNTGLEIIQGETAILGSKQLAVQTNAVKQVVDIR
FDIIEAPQYGELQRLHSSGEWRPTDSFSQRLLEKERLRYVSTYQDIQTTNATDYFKSRVI
VASRETTEILFLITVKWVNYHLVRNVMIDMDKVRKVTLDSECLLATAEGVVLSEEAIHYR
VLTTPKKGKLLLEGTVLGKNSTFSQKDLTDQKVHYELVDRPYEDTSDRFKFQLVSKHAQS
QYYDFRFSIKADVNSVFIRNDGVSLQEGGSKLITKDNLFAETLSTKDMYYTITSTPKHGK
LARISKSNSNASYDNILTFSNQDVLEERIMYIHDDSETTQDQFTFITSTSQGFKSLVTAD
DIGSKEGVFNITIRLVNDQKPVRVIDKVFHVVRDGQKILTIEDLRYHDADSDFDDGQLIY
TRRGIPMGDLVLVNDTAHRLFQFRQKDLEEKRVLFIHKGVSTGRFVLFVSDGQHFVSSLL
DISAHDPFLRVGNNTGLLVQKGRSVTFSTGNFSVVSNLDIRDNQEVLFILDGAPKYGGLY
RNEKMVESFSQCDFKDGLVSYRHDDSRHLADSFNLTVSAKGLHLAVRINVKVYLESHQRP
PIVLHHNSLLVEEGKPVTVSGTKLEVTHEDNLPSEIAFTVKVAPSHGFLRRFVEAEERYI
GTQQSPVNTFTQEDVGGGNIQYVQTEPERVNDTFVLDATNGVTDVSGIRMSVDIIPRLIP
LQVSNFTLNEGASKALTQDVLKVTNRHFSGNNFLYSLTERPRHGHVEHSRHPGVAITSFT
RRQVEHEFIYYIHDSSETSADCFTVAANDTGLRKQSAAQTVHIQVTAVNDEPPVITANRV
LRVWVSSMTEIRPEDLRVQDVDTPPAELNFMVTPPSNGHLALKRDPMKAVLNFTQQHVDQ
GQLLFVHKGAMSGGFSFQANDGVNFSPRQIFSITARALVLSLEKNRPLKVFPGSSAPVTN
EVLQAVTNDLSNTSNRVITFSVIQHPKLGRLVMRQPDNSMVDISSFTQDMVDRKEVVYIQ
TPIESVGWEAMDSMTFSVASAPSSLDSQTFRINVSYENTGPEHNTVLLANTGAEVTEGES
VIIDESKLDATNLMSKLPTPQRSSHEVWFQVTSLPQHGVIVVGERNLTKEKPNFSQFIVN
KFGITYKHDNSETTRDSFSFSAWLNPRGKTAQRPQDIIDVVEERLNITITPVNDQPPLLK
TKSPTLRVVQGDTVALGPENLKVEDLDDPPEDIKFSVISKPNNGYLALEGSLDESIVAFT
QAQINNGSVYFIHDGSSVSGVFYFSVTDGHHKPIYKLFNLEVTKITISLVNYTRLTLLQG
QTSVSLTQDNLAAETNGKNITIRYQITRPPNFGKLLKDNQESTMFEQEDLRAGRLSYHMI
SLISAEDSFEFTAFTSEANVSGQMFNISVTPLIHVRKGLRIPNGIPVKLNTSVLNASDLA
NISDSDPVFEMISQPKYGRVVWTKPKMSRKTGAVESFTFQDLIQERVALDLSANMTGVQE
LNDSLVFVLKAQNIQPAKGEFHFTVVPYDRGLVPTTRSPPVPTTSSSPHTPVQSGSASPV
QFTAFFSTQQPSKNQQKFKARNRWGNSNRTSIFSTTLGKPTRGTEDFPFRNTPVRVESYP
QKTTSPLLVILPLLALLLLIVIFVVLVVFLRHHRQRKQNAAEPKEPPPAGPSYQGQPQRC
TTVPTVTVTPLNPSCPGSPVLDRLLTQNQASIYDTIDSNMLISTWRNGSPSSFTQIIRTA
TPTLQTNQYWV
NT seq
7236 nt
NT seq
+upstream
nt +downstream
nt
atgtgcggcagcgtgtgtgttcccaccgggagaacaacgatggactgcgggctgaacagg
agggaatggtggctgcgcgcgctgctgtggtggtcgctcctggtcgagctggcgtcggga
gcttcattctacggcgacggctttgtgcagctcaaggcgtccgaggcgtccgaccagaac
acgctgcgcattcgcttccgaacctccagcgccggcggcctgctgttcctggccgccggc
cagacccactacttcctgctggagctgcgcgccggtcgcctgcagctgaaagtggacctc
ggactgggggaggtggtgttgcggtcagagggtggcacccagctcaacgacctggcttgg
cactcggtggaggtccgtcatgtgctgagcactgtcactctcactgtggacaagaactct
cactcagataaaaagatgtccggctacaatcacaatcttccgatttttgaatggctctat
gtcggaggtttaggaggcctggacagactttacctccccagagacgtggtcagcttccgg
ggctgcatggatgaggtggtcttcaacgaacacgacttggtgtcatccctgaggccgtat
acaggattcaatgtccacgaggtgtctttaggctgcagtccccaattctctgctacagag
gaagaccctatcagcttcttcagctccagggcttacatttctcttcccacctggaacgcc
cagcacgaagcgacatttgagagtatcgtgcatacttcagccaaagagggaattatcctg
tacaattctgcccgagagggggactttgtggctgtggagattcaggaagggttgccagtg
gccattgttggtaaaggtggaaccaaaaccgagcttcgatccctcacgttcatcaatgac
aggaaatggcattctatgaagttgcatttcacttccaaaagcctggagcttactgtcgac
ggagagatggtgaaaagcagcattagctctggttcaaaggggcttcagctgagaggttat
ctttttgtcggaggtgtcgatgacggcactagagcagaagtcagaaaggtgggccttgtc
tctgtgtctggaaagcgtgtcagaggaggttcctttaaaggatgtttaaagaatatcaaa
gtcaatggagtaacaaccggtctctccaacgccgtagtctccaaggatatctcagttggt
tgtgagctggagataaaaacagaaccctcgaccactgtgagtccaacgagtgctccgtta
cacaacttgcactttccgacaccaacaccgccacttcagatgtccaccctcgcaataggt
ttggacagaaattacggctcgaattttgtgcagctcaaaaaccttgtggtccaggagggc
agtcgagcatctctcgaggccaaacacatcaaggtagtcttggacttcaagaagcttggc
attcgacagtcccagatcatgttccaaatccaggagcaaccaactcatggtcaggtaagg
cttgatgttgatcaggaccaagaggagaacaccttcagcatgttggacctttggcacggg
cgagtgatgtatatccatggaggctccgaggaaccggatgacttcttcatgttttcaatg
tattcaagcagtagaaagaaagttcctgattatctgaagagcaacaaattgtaccgctac
aatattactgtgacacccaccaacgatgcgcccgaattgagtctccctgaaggaaatcta
tttgtcctattggagaactcaaagaaacgcctaaccactgatgtcctgaaagccaccgac
atcgacagcagctacaccgacctcgtcttctctgtgcttgggaacctgaacgctgacgca
ggatatctggaagttgagaacaacccaggagaggctgtgacagcgttctcatatttagac
cttgaggaactgagggtgttctatgttcatgcaggagttcgaaactcaagaattgttctt
agagttagcgacggagaaaaggtcagcaacactgttgtcttaagggtcatggctgtagcg
ctggagtataagatagcaaacaacacaggccttgagatcattcaaggagagactgctata
cttggttcaaagcagctggctgtgcaaaccaatgccgtgaaacaagtcgtagacatccga
ttcgatatcatcgaagcgcctcagtatggggaactccaaagacttcactccagtggtgaa
tggagacctactgactcgttttcccaaaggcttctcgaaaaagagcgcctgaggtacgtc
agtacctatcaagacattcagacaaccaacgccactgattactttaagagcagagttatt
gtggcttcaagggaaaccactgaaatcctctttttaatcactgtgaagtgggtaaattac
cacctggtgaggaatgttatgattgacatggataaagttcgcaaagtgacactggactca
gagtgtcttttagccacagctgaaggtgtagtcctctcagaggaagccatccattaccgg
gttctgaccacaccaaagaaagggaaactcctgctcgaagggacagtcttggggaagaac
tcaacctttagccaaaaagatttaacggatcaaaaagtacattacgagctcgtcgacagg
ccttatgaagatacaagtgaccggttcaaatttcagctggtttccaaacacgctcagtcc
caatactatgacttccggttttccatcaaagctgatgtaaacagtgtgttcataagaaat
gacggagtctcactgcaggagggaggaagtaaactaatcacgaaagacaacctgtttgca
gagactttgagcacaaaggatatgtactacacaataacaagcacccccaaacatgggaag
ctggcccgtattagcaagtcaaattccaacgctagctacgacaacatcctaacctttagt
aaccaggatgtattggaggaacggataatgtacatccatgatgacagtgaaaccacacaa
gaccagtttactttcataacctccaccagtcaaggtttcaaatccttggtcacagcagat
gatatcggctccaaagaaggcgtgttcaacattactattcggctagtcaatgaccaaaag
cccgtacgtgttattgataaagtgttccatgtagtaagagatgggcagaagatactcacc
atagaggacttgcggtatcatgatgcagactctgattttgacgatggccagttgatttac
actcgccgaggcatcccaatgggagacctggtgctggttaacgacaccgcccatcgcctt
tttcagtttcgccagaaggatctggaagaaaagcgagtgttgttcattcacaagggcgtg
agcacgggcaggtttgtgctctttgtctccgacggacagcattttgtatcgagcctcttg
gacatcagcgcgcacgaccccttcttgagggttggcaacaacaccggcctgctggtccag
aagggccggtccgtgaccttttccactggtaactttagcgttgtatcaaatttggacatc
agagacaaccaagaagtcctgttcattttggatggggctcccaagtacgggggtctatac
cgcaatgagaagatggtggagtccttctcgcagtgtgactttaaggatgggctggtttcc
taccggcacgacgacagcaggcatctcgcagactctttcaacctaacagtgagcgctaaa
ggtctgcatctagcggtgaggatcaatgtgaaggtttacctggaaagtcatcagaggcct
cccattgtgctgcatcacaacagcctgctggtggaggagggaaaaccagtgacggttagc
gggacaaaactagaggtcactcacgaggacaacctgccatctgagattgcattcacagtc
aaagtggcgccgtctcatggctttctccggcgtttcgtcgaagcggaggagcgctacatc
ggaacccagcagtcccctgtcaacacgttcacccaagaggacgtcggcggcggaaacatc
cagtacgtgcaaacggaacccgagcgagtgaacgacacgttcgtcctggatgccaccaat
ggggtgactgacgtcagcggcatcaggatgtctgtcgacatcatcccacgcctcatcccg
ctccaggtctccaatttcactctgaacgagggcgcgtccaaggcgctgacccaggacgtc
ctcaaagtcaccaaccggcacttttcgggaaacaacttcctgtatagtctgactgagcgc
ccgcggcacggccacgtggagcactcgcggcatcctggtgtggccataacctcgttcacc
aggaggcaggttgagcacgagttcatttactacatccacgacagcagcgaaacgtcagcc
gactgcttcaccgtggcggccaatgacactggcctgaggaagcagagcgcggcccagacg
gtgcacatccaggttacagctgtcaacgacgagcctcctgttattacagccaacagggtc
ctcagggtgtgggtgtcctcgatgacggagatcaggccagaggatctgagggtgcaggac
gtggacacgcccccagcggagcttaacttcatggtgaccccacccagcaacggacacctg
gccctgaagcgtgaccccatgaaggcggtgctaaacttcacccagcagcacgtagaccag
gggcagctgctgtttgtccacaaaggtgccatgtctggaggattcagcttccaagccaac
gatggggtgaacttctctccccggcagatcttcagcatcaccgccagagccttagtgctt
agcctggagaaaaaccgtccgctcaaggtgttcccaggctcttcggctcccgtcactaac
gaggtcctacaggcggtgaccaatgacctcagcaacacctccaaccgcgtcatcacgttc
agtgtgatccagcatcctaaactggggcgactggtgatgaggcagccagacaactcaatg
gtggacatctcctctttcacacaagacatggtggacaggaaagaagtcgtgtacattcaa
acccccattgagtccgtgggctgggaagcaatggactccatgaccttctctgtggcgtca
gcgccgtcttctctggacagtcagaccttcagaatcaacgtttcctatgagaatactgga
cctgaacacaacacagtcctgcttgcaaacacaggtgctgaagtgacggaaggggagagc
gtcatcattgacgaatccaagttggacgctaccaacctgatgtccaagctgccgacgcct
cagcggagctcccatgaggtttggttccaggtgacctctctgcctcagcacggtgtcata
gtggtcggggagagaaacctcaccaaagagaaacccaacttctcccagtttatcgtgaac
aagtttggcatcacctacaagcacgacaactcggagacaactcgtgattccttctcattc
agtgcatggctaaatcctagaggcaagacagcccaacggccccaggacatcattgatgta
gtcgaggaacgtctcaacatcacaatcacgcctgtgaatgatcagccacctttgctaaaa
accaaatcaccaactctgagggtggtgcaaggggatacagtagccctcgggcctgagaac
ctcaaagttgaagacttggacgatcctcctgaggatatcaagttctctgtgattagcaag
ccgaacaatggttacctagccctggaaggaagtttggatgagtcgatagtggccttcacc
caagcccagatcaataacggaagcgtctatttcatccatgatggaagctctgtctctggt
gtgttctacttcagtgtcacagatggccatcataaacccatatataaactcttcaaccta
gaagttaccaaaatcaccatttctctggtcaactacactagattgacacttttgcaaggc
cagacctcagtatccctgacacaagacaacctggcagctgagaccaacgggaaaaatatc
accattcgctaccagattacaaggcctcctaactttggcaaacttttgaaggacaaccaa
gagtctaccatgttcgaacaggaggatctacgtgctggaaggctgtcctaccacatgatc
tcccttatctctgcggaggacagttttgagttcacagccttcacttcagaggcaaatgtg
agcgggcaaatgtttaacataagcgtcacacctttgatccacgtcaggaaaggtttgagg
atccccaacgggattcctgtcaaactcaacaccagcgtccttaatgcctctgacttggcc
aatatcagtgatagtgaccctgtatttgagatgatctcccagccaaagtatgggagggtt
gtttggacaaaacctaaaatgtccaggaagactggagcagttgagtctttcacctttcag
gatctgatacaggagagggtagccttggatctgagtgccaacatgaccggagttcaagag
ctgaacgactcactggtgtttgtactgaaagctcagaacatccaacctgctaaaggagag
ttccacttcacagtggtgccatatgatcgaggccttgttcctacaactaggagcccccct
gtcccaaccacatcatcttcccctcatacacccgtccagagtggaagtgcttcgccagtc
cagttcacggctttcttctccacccagcaaccgagcaaaaaccagcagaagttcaaggca
cgcaaccgctgggggaactccaaccgaaccagcattttcagcacaactcttggcaaacca
acacgtggaacagaggactttccctttagaaacacaccggtgcgcgttgagtcctaccct
caaaaaaccaccagtcccctcttggttattttacccctgctggccttgcttctgctcata
gtcatcttcgtagtgctggttgtctttctccgacaccacagacaaagaaagcagaacgcc
gccgaaccaaaggagccaccgcccgctggtccctcgtaccaaggtcaaccccagaggtgc
acgacagttcccaccgtgactgtcaccccgctgaaccccagctgcccagggagtcctgtt
ctagataggctgctcactcagaatcaggcctcgatttatgacaccattgattcaaacatg
ctcataagtacttggaggaatggctccccctcgtcatttacccaaatcattagaaccgcc
acgcccacactgcagacaaaccagtactgggtttga
DBGET
integrated database retrieval system
