Pungitius pungitius (ninespine stickleback): 119225285
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Entry
119225285 CDS
T07626
Symbol
gtf2h3
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03022
Basal transcription factors
ppug03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119225285 (gtf2h3)
09124 Replication and repair
03420 Nucleotide excision repair
119225285 (gtf2h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppug03021
]
119225285 (gtf2h3)
03400 DNA repair and recombination proteins [BR:
ppug03400
]
119225285 (gtf2h3)
Transcription machinery [BR:
ppug03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119225285 (gtf2h3)
DNA repair and recombination proteins [BR:
ppug03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119225285 (gtf2h3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
119225285
NCBI-ProteinID:
XP_037338939
LinkDB
All DBs
Position
5:complement(331040..333997)
Genome browser
AA seq
302 aa
AA seq
DB search
MASDEEINLLVIVVDVNPIWWGQQAQRDTELSLSKCLDAVMVLGNSYMAMARTSKLAVIA
SHCEDSHFLYPGKSWRTGDSSGDDAYSSGDGKYELLAVANNIIVDEIRKVMSKTEVRGNS
TDTLLAGTLAKALCYIHRVSKELEVGQEIKSRILVIKAAEDCARQYMNFMNVIFAAQKQN
ILIDACVLDSDSGLLQQACDITGGLYLKIPQKVALAQYLLWVFLPDSEQRSQLVLPPPAH
VDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKIQLPQMIKPKKKKLKQPT
LM
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagacgaagaaatcaacttgctggtcatcgttgtggatgtaaatccgatctgg
tgggggcagcaagctcaacgtgacaccgagctgagcctgtcgaagtgtctggatgcagtc
atggtgttggggaactcctacatggccatggcgaggacgagcaagctggctgtgatcgcg
agccactgtgaagacagtcattttctgtatcccggtaagagctggagaacgggggacagc
agcggggatgatgcgtactccagtggggatggaaaatatgaactcctggcagttgccaat
aacattattgttgatgagatcaggaaggtcatgtcaaaaactgaagtgaggggaaattca
actgacactttgttggctggaacccttgccaaagctctgtgttatattcacagggtgtca
aaagagcttgaagttggacaggagataaagtccagaatattggtcattaaagcagccgag
gactgtgctcgtcagtacatgaacttcatgaatgtcatttttgctgcccaaaagcagaac
atcctgattgatgcctgtgttttggactcagactctggtctccttcagcaggcttgcgat
ataactggaggattgtacctcaagataccacagaaagttgctctggcgcagtaccttttg
tgggtgttcctgcctgactctgagcagcgctctcagctggtgttgcccccccctgcacac
gtggactacagagctgcgtgtttctgccaccgtaacctcattgagatcggctatgtgtgc
tcggtttgtctgtcaatattctgcaacttcagccccatctgcacaacttgcgaaactgcg
ttcaaaatccaactaccacagatgatcaagcccaaaaagaagaaactcaagcaacctaca
ctaatgtag
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