Pungitius pungitius (ninespine stickleback): 119225304
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Entry
119225304 CDS
T07626
Symbol
nelfb
Name
(RefSeq) negative elongation factor B
KO
K15180
negative elongation factor B
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119225304 (nelfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppug03021
]
119225304 (nelfb)
Transcription machinery [BR:
ppug03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
119225304 (nelfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COBRA1
Motif
Other DBs
NCBI-GeneID:
119225304
NCBI-ProteinID:
XP_037338968
LinkDB
All DBs
Position
5:9727562..9737973
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AA seq
583 aa
AA seq
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MFAGLPELGISNGEDLKETLTNCTEPLKAIDQFQMENGILLPTLQSALPFLDLHGTPRLE
FHQSVFDELREKLMERVATIAEGKDEDRYGKLEELLEKSFPLVKMQSIQPVVMRVLKHLP
KVPEKKLKIVMADKELYKVCAVEVKRQIWQDNQALFGDEVSPLLKQYIVEKEAALFSSDL
SILHNFFSLSPKARRQGEVVLKLTQMIGKNVKLYDMVLQFLRTLFLRTRNVHYCTLRAEL
LMSLHDLDISEICSVDPCHKFTWCLDACIREKFVDVKRARELQGFLDGVKKGQEQVLGDL
SMILCDPFACNTLVLSIMRNLQELLSQDTLPRESPDLMLLLRMLSLGQGAWDMIDSQVFK
EPRLDSEVVTRFLPAMMSVVVDDHTFTVDQKLPSEEKSVLSYPSTLPEAFSRFLQDNRVA
CEMGLYYVLHIAKLRNKNALQRLLPALVDTYNDMAFGDIFLHLLTGHLTLLSDEFGSEDF
CSVVFDGFLLTSFSSKENVHRHALRMMLHLHHKVLPSYMETLMKTLEPPKQSSEPVKELY
AQLTEKLEVQKKSPPLPDEAPSLDLGLHPVTVPTTASTPTTPL
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccgggcttcccgagctgggcatctccaacggggaggacctgaaggagacgctc
accaactgcacggagccactgaaagccatcgaccagtttcagatggaaaatggcattcta
ctgcccaccctccagtctgctcttcccttcctcgatcttcacggaacccctcggctggag
ttccaccagtcagtctttgatgagcttcgggaaaagttgatggagcgagtcgccaccatt
gcggagggcaaggatgaggacagatatgggaagcttgaagagctgctggagaagagcttt
cctcttgtcaaaatgcagtccattcagccagtagtgatgcgggtactgaaacatctgccc
aaggtgccagagaagaagctgaagatagtgatggctgacaaagagctatacaaggtgtgt
gcagtggaggtgaaaaggcagatctggcaggacaaccaggctctgtttggggacgaagtg
tcccctctgctgaagcagtacatcgtggagaaggaagcggctctatttagcagcgacctc
tccatcctgcacaacttcttcagtctgtctcccaaagcacgacgccaaggcgaggtggtc
cttaagctgacacagatgattggaaagaacgtgaagctgtacgacatggtgctgcagttc
ttaagaacactcttcctgcgaacgcgaaatgttcactactgcaccctgagagcagagctg
ctaatgtctcttcatgacctggacataagtgaaatctgctctgtggacccctgccataag
ttcacctggtgtctggatgcctgcatccgtgagaagtttgtggatgtcaagcgagcccga
gagctgcaaggtttcctggatggagtaaagaaaggacaagagcaagtcctcggggacctt
tccatgatcctctgtgacccatttgcctgtaacaccctggttctgagtatcatgaggaac
ctccaggaactgctgagtcaggacacgttacccagggagagtccagatctgatgctgttg
ctgaggatgctgtcactgggtcaaggagcgtgggacatgatcgacagccaggtctttaaa
gagcctcgtctggactctgaggtggtgactcgtttcctgcctgccatgatgtctgtggtt
gttgatgatcacaccttcaccgtggaccagaagcttccgagtgaggagaagagcgtattg
tcataccccagcaccctgccggaggccttcagcaggttcctacaggacaacagagtggct
tgtgaaatgggtctttactatgtgctccacattgccaagctgaggaacaagaacgccctg
cagaggttactcccggcactggtggatacctacaatgacatggcctttggggacatattc
ctgcacttgctgactggacacctcaccctactctctgatgagtttggatcagaagacttt
tgttcagttgtcttcgatgggttccttctgacttctttttccagcaaagagaacgtccac
agacatgccctccggatgatgctgcatctacatcacaaagtgctgccgtcatacatggaa
acgttgatgaagactctggaacctccaaaacagagcagcgagccagtgaaggagctttat
gctcagctgacggagaagctggaggtccagaagaagagccctcctctaccagatgaagct
ccatccctggacctggggttgcacccagtgactgtccccactactgcctccaccccgacc
acgcctctctga
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