Pungitius pungitius (ninespine stickleback): 119225305
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Entry
119225305 CDS
T07626
Symbol
arrdc1a
Name
(RefSeq) arrestin domain-containing protein 1a isoform X1
KO
K26228
arrestin domain-containing protein 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119225305 (arrdc1a)
Membrane trafficking [BR:
ppug04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
119225305 (arrdc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arrestin_C
Arrestin_N
Vps26
LDB19
Rgp1
Motif
Other DBs
NCBI-GeneID:
119225305
NCBI-ProteinID:
XP_037338969
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Position
5:9738204..9748888
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AA seq
453 aa
AA seq
DB search
MGKLQEFEITFDKNKVVYTPGESITGTVTFKLDQALQCKAVKVNCNGFCGVTSKVNDTAW
AAEEQYFNSTVSVADKGTLKQGKHTFPFKFLIPETAPTSFEGSYGRIVYRVRAFIDTPRF
LKDYNTEKAFYLLRFLNLNEVPDIWGTCSSAVKQQFTYMLVKTGTVVLKAQSDRKGYTPD
QIIQVLVNIHNQSGKTTGNMAASLMQRVTYETKRPTHDVRTIAEVEGGVVKAGKELEWKE
QIIVPPLPQSSLAGCDLIKIEYYVKVSLKSPDVMLALPIHIGNVSLDEKLHPSKQAAPST
SPASENTQASAFTPNISPTLPPRPAPKPAPRPTPRSRMFSHNSPSAPPAECHQGAEVGTQ
LNDVFSNKRQSQVVSPNAFSYAPGLFFAQNQQHNGPDTVPSEPMPSGSSGAPAPYPLENG
PGSMATPLILPPDYSTSSYPQEAPPSYDDSCNS
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaacttcaggagtttgagatcacatttgacaaaaacaaagtggtgtacaccccg
ggcgagtccatcactggaaccgtgacattcaaactggaccaggcgctgcagtgtaaagcc
gtcaaagtaaactgcaacggtttctgtggtgtcaccagtaaggtaaatgacacggcatgg
gccgcagaggaacagtacttcaacagcaccgtctctgttgcagataaaggaaccctgaaa
cagggaaaacatacctttccctttaagtttctcataccagaaactgctccaacatctttt
gaaggcagctatggtaggatcgtttacagagtaagagcctttattgacacaccgcggttt
ctcaaggactacaacacagagaaagctttctatcttctacgctttctaaacctgaatgaa
gtgccagacatatggggaacctgctcatcagcagtgaagcagcagttcacctacatgctg
gtgaagacgggcacagtggtcctgaaggcccagtccgacaggaagggttacaccccagac
cagatcatccaggtgttggtcaacattcacaaccagtctgggaagaccacaggcaacatg
gcagccagcctcatgcagagagttacctatgagacaaagaggcccacccatgatgtgagg
acgattgcagaggtggagggtggtgtggtaaaggctggaaaggagttggagtggaaagag
cagatcattgttccgcccctcccgcagtcctccctggctggctgtgatcttataaagatt
gaatattatgtcaaagtcagtctaaagtctccagacgtcatgttggcattacccatccac
atcgggaacgtctcactagatgagaaactgcacccttcaaaacaagcagctccttccacc
tctccagcatctgaaaatacacaagcatctgcctttacccctaacatctcccccactctg
cccccgcgccctgccccaaaacctgctccccgtcccacccctcgttccaggatgttctcc
cacaactcccccagtgctcctccagctgagtgccaccagggagccgaggttggcactcaa
ttgaacgatgtcttctccaacaagaggcagtctcaggtggtctcacccaatgctttcagc
tatgctcccggcctcttttttgcccagaaccagcagcataatgggcctgacactgtaccc
agtgagcctatgcccagtgggtcatcaggagccccagcaccttaccccctcgagaacggt
cccggctctatggcaacaccactcatcctgcctccagattacagcacctcatcatatccc
caagaagctcctccttcttatgatgacagctgtaactcgtga
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