Pungitius pungitius (ninespine stickleback): 119225328
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Entry
119225328 CDS
T07626
Symbol
utp15
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119225328 (utp15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppug03009
]
119225328 (utp15)
Ribosome biogenesis [BR:
ppug03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
119225328 (utp15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_IFT122_2nd
WD_LRWD1
Beta-prop_Vps41
Beta-prop_NWD2_C
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
119225328
NCBI-ProteinID:
XP_037339010
LinkDB
All DBs
Position
5:complement(6931539..6937673)
Genome browser
AA seq
528 aa
AA seq
DB search
MASFKPTKIQVYPKLGEKITHDTLYWKNYKPPIQIKEFGAVSSINFSPVAPHNFAVTAFT
RIHIYGPYSREPVKALTGFKNTAYCARFRADGQLLVAGCEDSVVRLFDVSGKVALRVFKG
HTKAVQVTDFTSDRYQIFTGSDDYTCRLWDLPNATELNSYREHTDYIRCGVTSKLNRDLF
ITGSYDHTLKVFDARADKSVMTMDHGQPVESLLLYPSEGLLVSAGGRYVKVWDLLKGGQP
LVSLKNHHKTVTCLCLSSNGQRLLSASLDRHVKVYNTTNFKVVHNLDYAASILSLALAPD
DESIVVGMTNNILSIRHRKSPEESKGVPGQQRRRPSYRVSLKGKNYAPKQEDYLVSKPVK
EYLAQYDKQLKKFNVSKALDAALEIWRRKRNPEVMVAVIKELDRRGTLKNALAGRDEQGL
ASLLHFILGNVVDPRFAPVLVTAAEMILDVYKQVVGQSPLVDRQLLRLQELLEKEIGYQQ
DLMEVLGMLDTMFASSLPKMSVPCPGSTRANGLTPGEVGTSRPQLHAT
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtttaaaccaaccaaaatccaagtatatccaaaactcggagagaaaatcaca
catgacacgctgtactggaaaaactacaagccgccgatccagataaaagaattcggtgct
gtctcaagcataaacttctccccggtggcaccacataattttgcagtgacagccttcaca
agaatccacatctatggcccctactcccgggagccggtaaaggcgttaacgggctttaag
aacactgcatactgtgcaaggttcagggcggacggtcagctgctcgtggcgggatgcgag
gactcagtggtccggctgttcgatgtcagtggcaaggtggcactgagggtgtttaaaggg
cacacaaaggcggtgcaggtcacggatttcacctcggaccggtaccagatcttcaccggc
tcggacgactacacctgtcggctttgggacctcccaaacgccacggagctcaacagctat
agggaacacaccgattacattcgctgtggtgtcaccagcaaactcaacagagatctcttc
attacgggatcctatgaccacacactgaaagtgtttgatgctagagcagataagagcgtg
atgaccatggaccatggccagccagtggagagtttgcttctttatccctccgagggactc
ctcgtctctgcaggtggacgttacgtgaaggtgtgggatttgctgaaagggggccagcct
ctggtgtcactgaagaaccatcacaaaactgtcacctgtttgtgtctcagcagcaacggt
cagaggctgctgtcggcttctctggacaggcatgtaaaggtgtacaacaccaccaacttc
aaagtggtgcacaacttggactacgctgcctcaatcctcagtctggctctggctccggac
gacgagtccatcgtcgtgggaatgaccaacaacatcctgagcatcagacacaggaagagc
ccagaggagtcgaagggagtcccgggtcagcagaggcgacggccgtcctatcgggtctct
ttgaaggggaagaactacgcccccaagcaggaggactatcttgtcagcaaaccagtgaaa
gagtatttggcccaatacgacaagcagctgaagaaatttaatgtgtcaaaggctttggat
gcggctttggagatatggaggagaaagagaaacccagaggtcatggtggctgtcataaag
gagctggatcgaagaggaacactgaagaacgctctggcgggacgggatgagcaggggctc
gccagcttgctccacttcattttagggaacgtggttgaccccaggtttgccccagtgctt
gtgacggcggccgagatgatcctggatgtttacaagcaggtggtcggccagtcgccgctc
gtggaccgccagttgctgcgtctgcaagagctgctggagaaagagatcggctaccagcag
gacctcatggaggtgctgggcatgttggacaccatgtttgcctctagcctccccaaaatg
tcagtgccgtgccctggttccaccagagctaacggcctgaccccaggagaagtgggtacc
tccagaccacagcttcatgccacctga
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integrated database retrieval system
