Pungitius pungitius (ninespine stickleback): 119225409
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Entry
119225409 CDS
T07626
Symbol
fem1c
Name
(RefSeq) protein fem-1 homolog C
KO
K25805
protein fem-1 homolog A/C
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119225409 (fem1c)
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
119225409 (fem1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
ANK_LRRK2
Ank_KRIT1
TPR_12
TPR_NPHP3
TPR_10
TPR_2
Motif
Other DBs
NCBI-GeneID:
119225409
NCBI-ProteinID:
XP_037339148
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Position
5:1349008..1355544
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AA seq
618 aa
AA seq
DB search
MDLKTAVFNAARDGKLRLLQKLLENKDGHEVTKLTGEKTNGATPLLMASRYGHLDLVEYL
LECCSAPVEVGGSVNFDGETIEGAPPLWAASAAGHLKVVQSLLGHGASVNSTTLTNSTPL
RAACFDGHLDIVRYLVEHKADLEVANRHGHTCLMISCYKGHKEIAQYLLERGADVNRKSV
KGNTALHDCAESGSLEIMRMLLQFGASMEQDGYGMTPLLSASVTGHTNIVDDLTTHQQTS
HKARIDALELLGATFVDKKRDLLGALKYWKRAMDLRYMDSNHVVHKAEAKQLIMAYDYAR
EVTNGEELDGLISDPDEMRMQALLIRERILGPQHPDTSYYIRYRGAVYADSGNFERCINL
WKYALDMQQSNLDPLSPMTASSLLSFAELFSFMLQDRAKGLLGTSVSFEDLMGILTKSVL
EIERAVTQNGPMPPDPAQLSKALSIILHLICLLEKVPCTSEQEHFKKETIYKFLKLQPCG
KNGYSPLHLAVDRNTTCVGRYPVCKFPSLTVASILLECGADVNSRDEDDNSPLHIAASNG
HPDIMNLLISCGTHFDCTNAFQQTACDILHEKELSRNIIQPINHTTLQCLAARAIIKHSL
AYRGNIPEKLEAFVLLHR
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaagacggcagtatttaacgcagccagggacgggaagctccgcttgcttcag
aaactattggagaacaaagatggacacgaggtgactaagctgacgggcgagaagacgaac
ggcgccacgccgctcctgatggcctcccggtacggccacctggacctggtggagtatttg
ctggagtgctgcagcgctcccgtggaggttggcggctcggtgaactttgacggggagacc
atcgagggggcgccccctctctgggctgcctcggcggcgggccacctgaaggtggtccag
tccctgctgggccacggggcgtccgtaaatagcaccaccctcactaactcgacccccctg
agagcggcctgcttcgacggccacctggacatcgtgcgatacctggtggagcacaaagcg
gacctggaggtggccaacagacacggccacacgtgtctcatgatttcctgctacaagggc
cacaaggagatcgcgcagtacctgctggagaggggcgcggatgtcaacaggaaaagtgtc
aaaggcaacacggcgcttcatgactgtgccgagtcgggcagtctggagatcatgcggatg
ctgctgcagtttggagcgtccatggagcaggacggctatggcatgaccccactgctgtcc
gccagcgtcaccggccacacaaacatcgtagacgacctcacgacgcaccagcagacaagc
cacaaagcgcgcatagacgcactggagctcttaggagccacgtttgtcgacaagaagagg
gatctgctcggagcgttaaaatactggaagagagccatggacctcaggtacatggacagc
aaccacgtcgtccataaagcagaagccaagcagctgatcatggcatacgactacgccaga
gaggtaacaaacggcgaagagctggacgggctgatatccgacccagatgagatgcgcatg
caggcactgctcatccgggagagaatcctgggcccgcagcacccggacacgtcgtactac
atccgttaccggggggctgtctacgccgactctggaaactttgagcgctgtatcaatttg
tggaagtatgccttggacatgcagcaaagcaacctggaccccctcagccccatgactgcc
tccagcctgctgtcgttcgccgagctcttctccttcatgctgcaggaccgagccaaaggg
ctcctggggacgtcggtgtcattcgaggacttgatggggattcttaccaaaagcgtgctg
gagattgagcgtgcagtcacacagaatgggccgatgccgccggaccctgcgcagctcagc
aaggccctgtctatcatcctgcacctcatttgtcttttggagaaggtgccctgtacttcg
gagcaggagcacttcaaaaaggaaaccatctataaattcctgaagctgcagccgtgcggc
aaaaacggctacagtccactgcacctggcggtcgaccgcaacaccacctgtgtgggccgc
tatcccgtctgcaagttcccctccctcaccgtggcctccatcctcctcgagtgtggggcc
gatgtgaacagccgcgatgaagatgacaacagcccccttcacatagccgcatccaacggt
cacccggacatcatgaacctgctgatatcgtgcgggactcactttgactgcaccaacgcc
ttccaacagacggcctgcgatatcctgcacgagaaggagctgtccaggaacatcatccag
cccataaaccacaccacgctgcagtgcctcgccgccagggccatcatcaagcacagcctc
gcttaccgggggaacatccctgagaaactagaagcctttgttttgctccacagataa
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