Pungitius pungitius (ninespine stickleback): 119225434
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Entry
119225434 CDS
T07626
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppug03041
]
119225434 (tfip11)
Spliceosome [BR:
ppug03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
119225434 (tfip11)
Other components
Complex C specific factors
119225434 (tfip11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
119225434
NCBI-ProteinID:
XP_037339195
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Position
5:12139473..12145129
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AA seq
836 aa
AA seq
DB search
MSMSHLYGRREEEEEGVEVESFEVTDWDLANEFNPERRRHRQTKDQATYGIWADRDSDED
ERPSFGGKKTKDYSAPVNFVSAGLRKAAAEEKEQQENEEGGGGSDDSENDGPSAPPPARG
IAPKKLQMGNLRANQSQRFAGGIQSGKGIGNWEKHTKGIGQKLLQKMGYQPGKGLGKNAQ
GIINPIEAKLRKGKGAVGAYGNERTQQSLQDFPVVDSEEEEEKEFQKELGQWRKDPAGSI
GKKKPKYSYRTVDELKAKGKLAGRSTTTSAGELAQVKVIDMTGREQKVYYSYSQMSNKHS
VPDEGPPSLSTQDQKGSGFALPELEHNLQLLIDLTEQDILQSARRLQHEKDVVVSLSHES
RALQSRLDAEQDAIQRMEAVLALVGRFPSGEMAPGEAPTLQECAQIFEILQTEYYEEYKT
MGLADLAVAVVQPLLKEKLRSWEPLKDSSFCLEDIGQWRAILESRDLHSSAPDSNMDPYH
RLLWEVWIPVMRPCVTGWQPRIVEPMVDCVEVWAPILPLWILDHLMEQLVLPRLQREVDN
WNPLTDTVPIHSWIHPWLPLLQSRLEPLYPPIRSKLSNALQRWHPSDTSARLILQPWKDV
FTPGAWEAFMVKNIIPKLALCLEELVINPHQQQMEPFNWVMDWEGMLSPSSLVSLLDKNF
FTKWLQVLCSWLSNSPNYEEITKWYLGWKSMFSDALLLQPLIKEKFNEALDIMNRAVSSG
MGGYMQPGARENIAYLTQTERRKDFQYEAMQERRDAESVAHRGVSAGVPTNFKDLIQTKA
EENNIVFMPIVAKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgtcccatctgtatgggaggagagaggaggaagaggaaggtgtggaggtggag
agctttgaggtgacggactgggatctagccaatgagttcaatccggaacgtcgcagacac
aggcagaccaaggaccaggccacctatggcatctgggcggaccgggactcagacgaggat
gagaggcctagctttggaggcaaaaaaaccaaagactacagtgctccagtaaactttgtg
agtgctggactgcgtaaggctgcagctgaggagaaggagcaacaggaaaacgaagaagga
ggaggaggctctgatgactctgaaaatgatggtccttcagcccctccccctgctcgcgga
atcgcacccaaaaaacttcagatgggtaatttgcgagccaaccagtcacagaggtttgca
ggtggcatacagtctggcaaaggcattggtaactgggagaagcacacaaagggaattgga
caaaaacttctgcagaaaatgggataccaaccaggcaaaggcctgggcaagaatgctcaa
ggtattataaaccccattgaggcaaagcttcgtaagggcaagggagcagtgggtgcttat
ggcaatgagcgaacccagcagagtctccaggatttccccgtggttgactcagaggaagag
gaagaaaaggagtttcagaaggagctaggccagtggcgtaaggatcctgcagggtccata
ggaaagaagaaacccaagtactcctacagaactgttgatgagctgaaggctaaaggcaag
ctggcagggcggagtacaacaacatctgctggagagttggcacaggtcaaggtaatagat
atgactggaagagagcaaaaggtttattacagttacagtcagatgtccaacaagcacagt
gttccagatgaaggcccaccaagcttgtccactcaggatcagaagggatccggctttgct
ctccctgaactcgaacataacttgcagcttctgatcgacctcacagaacaggacatatta
cagtccgccagacgtctgcagcatgaaaaggatgtagttgtgtctctgagccacgagtca
cgtgctctgcagagcagactggatgcagagcaagatgccattcagagaatggaggccgtc
ctggcattggtggggcgttttccttctggggagatggcacctggggaggcacccaccctg
caggagtgcgcccagatctttgagattctacaaaccgaatattatgaagaatacaaaact
atgggattggcagacctagctgtagctgttgttcagccattactcaaagagaaacttcgc
tcctgggagcctcttaaggacagctctttttgtctggaagacatcggtcagtggagagca
atcctcgagtctagagaccttcacagcagtgccccagattcaaacatggacccttaccac
agactattgtgggaagtgtggatccctgtgatgcggccatgtgtgacaggctggcagcct
cgtatagtggagccaatggtggactgcgtggaagtgtgggctcctattctccccttgtgg
atccttgatcacctgatggagcagctagtcttaccccggctacaacgcgaggtggataac
tggaacccgttaactgacacggtccccatccactcctggatccatccctggctgcctctg
ctccaatctcgtctggagcctctttaccccccaatcaggagcaaactatccaatgccttg
cagcgatggcatcccagcgacacttcagcccgcctcatcctgcagccttggaaagatgtt
ttcacaccgggtgcatgggaggccttcatggtgaaaaatatcattcctaaacttgctctg
tgtctggaggagctggttatcaaccctcaccagcagcagatggagccatttaactgggtg
atggactgggagggcatgttgtccccctccagtcttgtgtccctgctggacaaaaacttc
tttacgaagtggttgcaggtcctgtgttcttggttgagcaacagtcctaactatgaggaa
atcacaaaatggtacctgggttggaaaagcatgtttagtgatgccttgctattacagcct
ctcattaaagagaaattcaacgaagcactggacatcatgaaccgtgcagtgtcttcaggc
atgggtggatatatgcaacctggtgccagggagaatattgcatatctaacacagaccgag
agacgaaaggacttccagtatgaagcaatgcaggagcgcagagatgccgagagtgtggct
cacagaggcgtcagtgctggtgtgccgaccaatttcaaagatcttatccagacaaaggca
gaggagaacaacattgtctttatgcccatagtggccaaacggcacgagggcaaacagctg
tacacttttgggcgtatagtcatctacatagacagaggggttgtttttgtgcaaggagag
aagacttgggtgcccacgtctttgcaaagtctgatagatatggccaagtga
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