Pungitius pungitius (ninespine stickleback): 119225473
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Entry
119225473 CDS
T07626
Symbol
usp8
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04137
Mitophagy - animal
ppug04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119225473 (usp8)
04137 Mitophagy - animal
119225473 (usp8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppug01002
]
119225473 (usp8)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119225473 (usp8)
04121 Ubiquitin system [BR:
ppug04121
]
119225473 (usp8)
Enzymes [BR:
ppug01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119225473 (usp8)
Peptidases and inhibitors [BR:
ppug01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119225473 (usp8)
Membrane trafficking [BR:
ppug04131
]
Endosome - Lysosome transport
Others
Others
119225473 (usp8)
Ubiquitin system [BR:
ppug04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119225473 (usp8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
Rhodanese
Motif
Other DBs
NCBI-GeneID:
119225473
NCBI-ProteinID:
XP_037339252
LinkDB
All DBs
Position
4:complement(8067554..8078353)
Genome browser
AA seq
1081 aa
AA seq
DB search
MPAVSTGVKELYLSTSLGELNRKAEIKPDKTHTRSYVQSSCKIFKAAEECRLDRDEEKAY
VLYMKYLTVYEIIKERPDFKQQMEYYMTILGPNSFKKAIEEAEKLSKSLKLRYEEVEVRK
KLEEMERQEEKKRREEMTEKDGGRSSPKVSSVSKKDSKKVKGQQNELKNAPSKAEVLAGG
ISAERLFHMMKDQTITIIVMDARSHNDFEESHIQVPGQTCFSVPEEAISPGIIVNQIEAK
LPEASKEHWKRRAFIDYIVLLDWFSSVTDLTLGTTLQSLKDALYKWDNITILRSEPLVLE
GGYENWLLFYPMYTTNAKVRPPRQNIISSIPHLNFSYPSLEEPKPPVPPEPEPEVILKPQ
EPTAPVLVNGVKPAESPTSYTSKVTDRLPGAVDCTVPGDIHSGQDLSEKGTTAGTFTPLP
ATSKAFPQFDRTKKPSVLVSNDPKPSQNGLAKDSLPNGPLAPDRSVKPSLLANASLSKEE
QSQIHSEAVAVMEKAKQEQEKRNQERRVEDERREKERLEREKSEKRRKEDEETGPQEKKK
LERQKAEEEEDKEKRLWDGKERRGKEQNSDTPKSMSLDCPPPNHIVNDIKREPLTRARSE
EMGRSVPGLPVGWMKFLDTVTGTYRYYHSPTNRVHLYPPEVTVPQTPPSTPPTVKQKPTR
LAEPDTSQEQEREQSKLKRSYSSPDISQDLREEAQMKAAMPTTAAVIPTINRETKPLNKV
YSKVEIVRPSAAKIRNLNPSFGGLGASLTGLRNMGNTCYMNSILQCLCNTPGMAEYFNNN
YYLEDINRHNILGHKGEVAEEFGVIMKALWAGLYKCISPRDFKITIGKINDQFAGCDQQD
SQELLLFLMDGLHEDLNKADNRKRYKEEENDHLDDQTAADLAWSKHKLLNESIIVALFQG
QFKSTVQCLTCHRKSRTFETFMYLSLPLASTSKCSLQDCLRLFSKEEKLTDNNKVFCRHC
KAHRDSTKKLEIWKVPPIVLVHLKRFSYEGRWKQKLQTYVDFSLETLDLGQYVIGPKQTL
KKYSLYGVSNHYGGLDGGHYTAFCKNALKQRWYKFDDHEVTEISTPTVKSSAAYILFYSA
L
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgtgtccaccggggtcaaagagctgtacctgtccacatctctgggtgaactc
aatagaaaggctgagattaaacccgacaagacccacaccagaagctatgttcagagttcc
tgcaaaatcttcaaggcggcagaggagtgtcgtctggacagagatgaggagaaggcttat
gtgctgtacatgaagtatttaacagtttatgaaattatcaaggaaagaccagacttcaaa
caacaaatggagtattacatgaccatacttggaccaaacagctttaagaaagccattgaa
gaagccgagaagctctctaaaagccttaaactcaggtatgaggaagttgaggttagaaaa
aaacttgaggaaatggagagacaagaggagaagaaaaggagggaggaaatgacagagaaa
gatggtggccgaagctctcccaaagtgtcatcagtaagcaagaaggacagcaagaaggtg
aaagggcaacaaaatgaactcaagaatgcaccttcaaaagctgaagtgctggctggcggg
atttcggctgagcggcttttccacatgatgaaggaccagacaataacaataattgtcatg
gacgcccgcagccacaatgactttgaggagtctcacattcaggtcccaggccagacctgt
ttcagtgtgcctgaggaggccataagcccaggaataattgtgaatcagattgaggcgaag
ctgcctgaagcgtcaaaagagcattggaaaagacgggcattcatcgattatatagtcctt
ctggactggttcagttctgtcaccgaccttacacttggcaccaccttgcagagcctcaag
gatgccctctacaagtgggacaacatcacaatcctgcgtagtgagccgctggtgctggag
ggaggctacgagaactggctgttgttttacccaatgtacacaaccaatgctaaagtccgc
ccccccagacagaatataatcagctccatccctcatttgaactttagctacccatccctt
gaggaaccaaagcctccggtcccacctgaaccagagcctgaggtgatactcaagccacaa
gaacccacagctcctgtgctggtgaacggagttaaaccagcagaatcccccacatcgtac
acttccaaggttaccgacaggctgccaggtgctgtggattgcaccgttcctggcgacata
cattctgggcaagatctcagtgagaagggcaccacagcaggcacgttcaccccattacct
gcaacatccaaggcctttccccagtttgaccgtaccaagaaaccctctgtccttgtgtca
aacgatcccaagcccagccagaacgggttagcaaaggactccttgccaaatggcccgctt
gcccctgatcgctcagtgaaaccgtcgctcctcgcaaacgcttctctctctaaagaagaa
caaagccagatacactctgaggcggtggcagtgatggagaaggcgaagcaagagcaggag
aaacgcaaccaggagcgccgtgtagaggatgagcgacgggagaaggaaaggctggaaaga
gagaaaagtgaaaagaggaggaaggaagatgaggagacaggacctcaggagaaaaagaaa
ctggaaaggcagaaggccgaagaagaggaagataaagagaagaggttgtgggacgggaaa
gagaggaggggtaaggagcagaactcagacactcccaagagtatgtccctggactgtcct
cctcccaaccatattgttaatgacatcaagagggagcctctgacccgagcgaggagcgag
gagatgggcaggagcgtaccaggccttccagttggttggatgaagtttcttgatacagtg
acagggacctaccgatactaccattcccctaccaaccgcgtccacctgtaccctcctgag
gtcactgtaccccagaccccgccctccacgccaccgacagtcaaacagaaaccaacgcga
ctggcggagccagacaccagccaagaacaagagcgggaacagtctaagctgaaacggtcc
tactcctcccctgatatcagccaggacttgagagaagaggcccagatgaaggctgccatg
ccgaccactgctgctgtcatacccaccatcaacagggagactaaaccgcttaataaagtc
tactctaaagtggagattgtgcggccatcagctgctaaaattcgcaacctgaatccttca
tttggaggtctgggtgcatcactcactggccttcgtaacatgggcaacacctgctacatg
aactccatcctgcagtgtctatgtaacactccgggcatggctgagtacttcaacaacaat
tactacctggaggacatcaacagacacaacatactgggccataaaggggaggtggcggag
gagtttggtgtgatcatgaaggccctgtgggctggcctgtacaagtgcatcagtccgcgg
gacttcaaaatcaccataggcaagatcaatgaccagtttgctggttgtgaccagcaagac
tcccaggagctgctgctgttccttatggatgggctccatgaggacctcaacaaggcggac
aacaggaagcgctacaaggaggaggaaaacgaccacctggatgatcagacagcagccgac
ttggcctggagcaaacacaagctgctgaacgagtccatcattgtagccctgttccagggg
cagttcaagtccaccgtgcagtgtctgacctgccaccgcaagtctcggacatttgagacc
ttcatgtacttgtcactgcctctggcctccaccagcaagtgttccctgcaggattgtctg
aggctgttctccaaagaagagaagctgaccgacaacaacaaggtgttctgcagacactgc
aaagcccacagagattccaccaagaaactggagatctggaaggtcccacccatcgtcctg
gtgcacttaaaacggttttcctatgagggcagatggaagcagaagctgcagacctacgtg
gacttctctctagagactctggacctgggccagtacgtcattggaccaaagcagacattg
aagaaatactccctatatggagtgtctaaccactacggcggtctagatggtggccactac
actgccttctgtaagaatgcactcaaacagcgctggtacaagtttgatgaccacgaggtg
accgagatctccacccccaccgtcaagtcctccgcagcctacatcctgttttactcggcc
ctgtga
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integrated database retrieval system
