Pungitius pungitius (ninespine stickleback): 119225513
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Entry
119225513 CDS
T07626
Symbol
sema6a
Name
(RefSeq) semaphorin-6A isoform X1
KO
K06842
semaphorin 6
Organism
ppug
Pungitius pungitius (ninespine stickleback)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
119225513
NCBI-ProteinID:
XP_037339309
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Position
5:3452909..3541745
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AA seq
1018 aa
AA seq
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MRCEALLLYFTLLHIAGAGFPEDSEPISISHGNYTKQYPAFVGHKPGRNNTQRHKLDIQL
IMIMNRTLYIAARDHIYTVDTDTANGDEIFFSKKMTWKSRQADVDTCRMKGKHKDECHNF
IKVLLQQNDDTLFVCGTNAFNPSCRTYKTDTLEALGEEISGMARCPYDAKHANVALFADG
KLYSATVTDFLAIDSVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVNYGDFIYFFFREIA
MEYNTMGKVVFPRVARVCMNDRGGSPRVLEKQWTSFLKSRLNCSIPGDSHFYFNILQAVT
DVIHINGRDVVMATFSTPYNSIPGSAVCAYDMAEVANAFTGRFKEQKSQDSTWTPFPEDK
VPKPRPGNCAGTATMERYKVSNEFPDDTLNFIKMHPLMDEAVPSIANRPWFLKTMVRYRL
TRIVVDNKAGPHSNQTVVFLGSEKGIIVKFLANMNSGFLNDSVFLEELNVYNPDKCSIDG
VEDKRIVGMQIDSKSHALWVAFTSCVVKVPLSRCERHGRCKKSCIAARDPYCGWVSEGAC
KQVVGNTKSAFEQDVEHGNTDGLGDCQNTFVALNGHHHRHHHRTLSLPTSALPEAAEGPL
GRGRMVERKDPPMSSDKGEDPYVAVPSQTQPEANGVIRESYQKGRDQLVPVTLLAIAVIL
AFAMGAIFSGIIVYCVCDHRRRDVDLTGRKAKDAHHHHLRRGSMNSVTKLTGLFETQAKD
GRPEAILTPLMHNGRLTANGKMLIKADQHHLDLAALPTPESTPMQPRRKPSRGSREWERN
QNLINACTKDMPPMGSPVISTDLPLRASPGHIPSVVVLPLPQHQHQLQPHLQQSYQHEYV
EQPHHSDLGMGHGVMDDQGATLEYKTVKGPCHSLNMVDPDGALPPRVPQREASLTVPPAV
PQMGKRLEVHSSVYGLRKGSASGASGSSALKRHNTNSSNSSHLARHHSFNRVETPPPAPQ
RVDSIQMTAQGVSLSRQPGMSSYGSLPRTGLKYLKPDVPPKPSVVSLSTKVKSSDSCT
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgtgaggccttgttactttacttcacgctactgcacatagccggggccggcttc
cccgaggacagcgagcccatcagcatctcacacggcaactacacaaagcagtacccggcg
tttgtaggacacaaacccggcaggaacaacacgcagcggcacaagctggacatccagctc
atcatgatcatgaaccggacgctgtacatcgcagccagggatcacatatacacagtggac
acggacaccgccaacggtgacgagatctttttcagtaagaaaatgacatggaagtccaga
caggcagatgtggacacttgccgaatgaaagggaaacataaggatgagtgtcacaatttc
atcaaagttctcctgcagcaaaacgacgacactttgtttgtgtgtggcacaaatgctttc
aacccctcctgccggacctacaagacggacaccctggaggctctgggggaggagatcagt
gggatggcacgctgcccgtatgacgccaagcacgccaacgtcgccctcttcgcggatggc
aagctgtactcggccaccgtgacagacttcctagcgatcgattcggtcatctatcgtagc
ctgggagacagcccgactctgcgcaccgtcaagcatgactccaagtggctgaaagagccc
tactttgtccaggcagtcaattacggggacttcatctacttcttctttcgggaaattgct
atggagtacaacacaatggggaaggtggtgtttccccgggtggccagggtgtgtatgaac
gaccgagggggctcgccccgtgtcctggagaagcagtggacctcgtttctcaagtctcgc
ctgaactgctccatccccggcgactcccacttctactttaacatcctgcaggccgtgacc
gatgtcatccacatcaatgggagggacgtagtcatggcgaccttctccacaccttacaac
agcatcccaggctcggcggtgtgcgcctatgacatggcagaggtggccaacgcgttcaca
gggcgtttcaaagagcagaagtcccaagactccacctggacgccgtttcctgaagacaag
gttcccaagccaaggcctggaaactgtgccggcactgcaaccatggaaaggtacaaggta
tccaacgagttcccagatgacacgctcaacttcatcaagatgcatccactgatggacgag
gcagtaccgtccatcgccaacaggccctggttcctcaagaccatggtccggtatcgtctg
acgcgcatcgtggtggacaataaagcgggtccccatagtaaccagacggtggtcttcctg
ggatcagagaaaggcatcatcgtcaagttcctggccaacatgaacagcggcttcctaaac
gatagcgtgtttctggaggagctcaacgtctacaacccggacaagtgcagcatagacggc
gtggaggacaagcgcatcgtcggcatgcagatcgacagcaagagtcacgctttgtgggtc
gctttcacctcctgtgtggtgaaggtgccgctgtctcgctgtgaaagacacgggagatgc
aagaagtcctgtatagccgccagagacccgtactgtggttgggtgtcagagggagcctgc
aaacaggtggttggtaacacaaaatcggcctttgagcaggacgtggagcatggtaacaca
gatggcctgggagactgccaaaacacctttgtggcgctgaacggccaccatcaccgccac
catcaccgcaccctctccctccccacctcggccctgcccgaggcggccgagggccccctg
gggcggggccgcatggtggagcggaaggaccccccaatgagctcagacaaaggggaggac
ccctacgtagccgtgccctctcagacccagcccgaagccaatggtgtgatccgcgagagc
taccagaagggtcgcgaccaactcgttcccgtgaccttgctggccatcgccgtcatcctc
gccttcgccatgggcgccatcttctccggcatcatcgtctactgcgtctgcgaccaccgc
cggcgggacgtcgacctgacgggccgcaaggcgaaggacgcgcaccaccaccacctccgc
cggggctccatgaacagcgtgaccaagctgacgggcctgttcgagacgcaggccaaagac
ggacgccccgaggccatcctcacgcctctgatgcacaacgggaggctgacggccaacggg
aagatgctgatcaaagcggaccagcaccacctggacctcgccgctctgccgacgcccgag
tccacccccatgcagccgcgtcgcaaacccagcaggggcagccgcgagtgggaaaggaac
cagaacctcatcaacgcctgcaccaaggacatgccgcccatgggttcgcccgtcatctcc
acggacctgccgctgagggcctcgccgggccacatccccagcgtggtggtcctgcctctg
ccgcagcatcagcaccagctccagcctcacctgcagcagtcctaccagcatgagtacgtg
gagcagccccaccacagcgacctgggcatgggccacggcgtcatggacgaccagggggcc
accctggagtacaagacggtcaagggcccctgtcacagcctcaacatggtggatccagac
ggcgcgctgccgccgcgcgtgccccagcgcgaggcctcgctcaccgtccccccggccgtc
ccgcagatgggcaaacgcctggaggtccactcgtcggtgtacgggctccggaagggatcg
gcgtccggagcgtccggatcctccgccctcaagaggcacaacaccaactcatccaactcc
tcccatttggcgaggcaccacagcttcaaccgcgtggagacgccgcccccggctccccag
agggtggactcaatacaaatgacagcacagggcgtgtctctgtcccggcagcctggaatg
agctcctacgggtcactgcctcgaacgggcctcaaatacctcaagcccgacgtccccccg
aaaccctccgtggtctcgctgtcaacaaaagtcaagtccagtgactcctgcacatag
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