Pungitius pungitius (ninespine stickleback): 119225515
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Entry
119225515 CDS
T07626
Symbol
lrp3
Name
(RefSeq) low-density lipoprotein receptor-related protein 3 isoform X3
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119225515 (lrp3)
Membrane trafficking [BR:
ppug04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
119225515 (lrp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
CUB
Motif
Other DBs
NCBI-GeneID:
119225515
NCBI-ProteinID:
XP_037339316
LinkDB
All DBs
Position
4:complement(7453410..7474897)
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AA seq
813 aa
AA seq
DB search
MEGNAIRAEGCSERAEVHTERRGVIYSPSWPLNYPAGVNCSWHIQGGQGEVITISFRSFD
VAESGSCLGDFLLLTPMRNGESRLCGSMLPLPFVSTRGRVWLYFHSRANSSGQAQGFRLS
YIRGHLGQSSCQSDEFLCGNGKCLPRSWKCNSQDECGDGTDERSCSPPPTEARPGPCPLG
SLACTEAQSTRCLPVALRCNGARDCADGADELGCPDTACGRRLGNFYGAFASPDFFRANR
SAAAELRCSWSLDTQDPKPIVLQLDLQLGPGDSLRVYDGLQQRAEHLLQVLSHHNNRRPA
LLESSRGQMSVLYMAQPHSSGHGFNATYQVKGYCFPGERPCGSDQGCYSERQRCDGYWHC
PSGRDEEACSTCPDGEFPCEGGGGTCYPASERCNNQKRCPDGSDEKNCYDCQPGNFHCGT
NLCIFETWRCDGQEDCLDGSDERDCLAAVPRKVITAALIGSLVCSLLLVIALGCALKLHS
LRSREYRAFETQMTRMEAEFVQREAPPSYGQLIAQGLIPPVDDFPVYNPTQASVLQNLRL
AMRRQIRRHSTRRSTSSSSSSRRRLGHLWSRLFHGVVRARGQVPLLDSPGPAQIALGLHS
YRTVGAQGPLTRPGGGLREECYVAGRRGSCFSATADLQSCTSESPASPLSLLSADSPEGG
GLSPVGRPTPSEPSTPVQSDFSEHTAPPPTPQEALVPPRPTRTSRKLVLELAVNLNGVSL
RRYSSLGPLSPVSPLVFPSSSQTPTTLPHYLGREVTSPPEPSKAEVSNGHFTMGVANRAI
RRRDERRSEGKKRLSRFTLGDEGGDSGRETTPC
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggaggggaacgcaattagagcggaaggctgcagcgagcgagcggaggtccacaccgag
cggaggggtgtgatctacagcccctcgtggcctttgaactaccccgccggggtcaactgc
agctggcatatccagggaggccagggcgaggtcatcaccatcagtttccgtagctttgac
gtggcagaatcggggagttgtttgggggactttctcctgctgacgcctatgaggaacggg
gagtccaggctgtgtggctccatgctgccgctgccctttgtctccaccagggggcgtgtt
tggctgtatttccactctcgggccaacagttctgggcaggcccagggcttccgtctctcc
tacatccgaggtcacctgggtcagagcagctgtcagtcggacgaattcctgtgtgggaac
gggaagtgtcttcctcgctcctggaagtgcaacagccaggacgagtgcggcgacggcacg
gacgaacgcagctgctcccccccccccaccgaggcccgtcccggcccctgccccctcggc
tcgctggcgtgcaccgaggcccagtccacccgctgcctgcccgtcgccctgcgctgcaac
ggcgcccgcgactgtgccgacggcgccgacgagctgggctgccccgacaccgcctgcggc
aggcgcctgggcaacttctacggcgcctttgcttccccagatttcttccgagccaacagg
agcgccgcggcggagctgaggtgttcgtggtcgctggacacccaggaccccaaacccatc
gtcctgcagctggacctgcagctcgggcccggagactcgctgcgtgtctacgacgggctg
cagcagcgtgcggagcacctcctgcaggtgctgtcgcaccacaacaacaggcgcccggcg
ctgctcgagtcgagccgcgggcagatgagtgtgttgtacatggcccagcctcacagctcc
gggcacggcttcaacgccacgtaccaggtcaaaggttactgtttccccggtgagcgcccc
tgtggcagcgatcagggctgctactctgagcgccagcgctgcgacggctactggcactgc
ccgtccggccgcgacgaggaggcctgctcgacgtgcccggacggggagttcccctgcgag
ggcggcggcggcacgtgctacccggcctccgagcgctgcaacaaccaaaagaggtgcccg
gatggctcggacgagaagaactgctacgactgccaacccggcaacttccactgcggcacg
aacctgtgcatctttgagacgtggcgctgcgacggccaggaggactgcctggacgggagc
gacgagagggactgcttggcggcggtgcccaggaaggtgatcacggccgccctgatcggc
agcctggtctgcagtctcctgctggtcatcgccctcggctgtgccctcaaactccactcc
ctcagaagcagagagtacagagcttttgagactcagatgactcgcatggaggcagagttt
gtccagagggaagcccccccttcgtatggtcagttaatcgcccagggtctaatccctccg
gtggatgatttcccggtgtacaaccccactcaggcctccgtgctacagaacctgcggctg
gcgatgcgcaggcagatcagacgtcactccacgcggcgctccacttcctcctcctcctcc
tctcgccgccgcctcgggcatctgtggagccgcctgttccacggggtggtgcgagccaga
ggccaagtccctctgctcgactcccccggacccgcgcagatcgccctggggctccacagc
taccgaaccgtgggtgctcaggggcccctgacgaggcccggaggtgggctcagggaggag
tgctacgtggctgggaggcggggctcgtgcttctcagccaccgccgacctgcagtcctgc
acgtcagaaagccccgcctcaccgctctccctgctgtcagcggacagcccagaggggggg
ggactgtcgcccgtcggcaggccaacaccatctgagccctccacccctgttcagagtgac
ttttcagaacataccgcaccccctcccacaccccaggaagccctcgtgcccccacgcccc
acgaggacatcgaggaagctggtcctggagctcgccgttaacctaaatggggtctccttg
agacgttactcctccttggggccactgtcacccgtctcacccctagtgtttcccagcagc
tcccagacccccacgaccctaccgcactacctggggcgtgaggtgacttcaccccctgag
ccctcgaaagcagaggtcagcaacggccacttcactatgggggtagcgaacagggcaata
agacgcagggatgagaggaggagcgaaggcaagaagaggctctccaggtttaccctcggt
gacgagggaggagattcagggagggagacaacgccatgctga
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