Pungitius pungitius (ninespine stickleback): 119225577
Help
Entry
119225577 CDS
T07626
Symbol
tncb
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04510
Focal adhesion
ppug04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119225577 (tncb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119225577 (tncb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ppug00536
]
119225577 (tncb)
Glycosaminoglycan binding proteins [BR:
ppug00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119225577 (tncb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
EGF_TEN
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
Ig_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
Pur_ac_phosph_N
EGF
fn3_2
Fn3_Dep-1_1st
Big_5
hEGF
Motif
Other DBs
NCBI-GeneID:
119225577
NCBI-ProteinID:
XP_037339435
LinkDB
All DBs
Position
5:complement(4951791..4990462)
Genome browser
AA seq
1602 aa
AA seq
DB search
MGMKGLLFGCVTVALLLEPSTAGLVKKVIRHRRDALAPTKTQENLTLPHPDQPVVFNHVY
NINVPTTSLCSVDLDSPGDGDLKHKSAPLEMQNTEHMEHTVDGDNQIVFTHRINIPKQAC
GCDNQLPDIKDILNRLEMLESELSSLREQCSSGTVCCGAQVTGEVSTKPFCNGHGNWSTD
TCSCACEPGWKGFNCTEPECPNDCQDQGRCVDGKCECFEGFGGDDCSLELCLLDCGDYGH
CVEGSCLCEDGFIGEACDQTNCLNNCLGRGRCVDDECVCDEPWTGFDCSELICPNDCYDR
GRCVNGTCYCDEGYAGEDCGELTCPGNCNNRGMCVNGQCVCQTGYSGEDCSKLTCPKNCN
ERGHCFNGKCICDPGFEGEDCSILSCPDNCSNRGQCIDGECVCDVGYQGEDCSELSCPNN
CQDRGRCVNGECMCDKGYAGEDCSFKTCPKACMGHGECVDGNCVCFVGFTGEDCGELTCP
NNCLDRGDCVNGQCVCHKGFTGEDCSEKTCPKNCLDRGYCVDGDCVCYEGFTGPDCSIMT
CPNDCHNQGHCENGVCVCNEGFIGEDCSGVSPPKDLSVVEVTPEAVDLTWENEMRVTEYL
ITYVPTAPGGLELDARVPGDQKMTTIRELEPGVEYLISVYALLNNKKSLPVSARVATHLP
EPEGLKFKSVRETSVQVQWDPLDIKFDGWNLIFRNTKEEDGEILNSLGRPETTFEQSGLG
PGQEYEVKLEVVKNNKRGPPASQNVVTMIDAPSQVDVRDVTDTTALATWFQPVAEVDGVS
VSYGPSSNPADRTVVKLSSTETQYHLGGLTPDTQYEVSLLARRGERTSIPVYESFLTDLD
APRDLQTVELTDESITLEWKNSRAPVENYRIKYGPLSGGEHGELLFPPGPKDTTQAKITG
LRPGTEYGMGVTAVTDERESLPATTNAETALDAPKDLTVAEVTETTMMLEWKRPLAKLDF
FRLVYVSAEGHRGDDVVPSGSESHILRGLAPGMLYTVSITAERGHRTSAPSTISAATEEE
KPEVTNVTVSDVSWDSFLLSWSAEDGAFEAFLIEVTDAETGAEWQNHTAPGDARSLPISG
LSSTTWYRANLYGVYRGAVLDPVFADTITDLGSPKAIRFSDVTDTSATVHWVLPKARVDS
NRVTYVPAHGGNAKTLTVDGSQAQTVLPNLTPGVTYEVTVVAVKGQRESKPGSDSVTTAL
DKPRGLNAINITDTEALLLWQPAIATVDGYVITYSADSVAPVMERVSGNVVDFDMSSLTP
ATHYTVKVYAVRDLAKSAATTTDFTTDVDAPQDLAASNIQTENAMLSWKPPRADITGYIL
SFEAADGTIREVVLSPTAVSYNMAPLSASTEYTVKLQAIAGPKRSRVVTTVFTTTGVLYR
FPKDCSQALLNGDTTSDLYTIYLGGDESQPIQVYCDMSTDGGGWIVFLRRQSGKLEFFRN
WKNYTGGFGDMNDEFWLGLSNMHKITTGGQYELRVDLRDKGETAYAQYDKFSVSEPRTRY
KVHVGGYSGTAGDSMTYHHGRPFSTYDHDNDIAVTNCAQSYKGAFWYKNCHRVNLMGRYG
DNSHSKGVNWFHWKGHEHSIEFAEMKIRPSNFRNLEGRRKRS
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atggggatgaaaggcttgctctttggctgcgtgacggtggccctgctcctcgagccttcc
accgccggcctcgtcaagaaggtcatccgccaccgtagggatgccctagcacctacgaaa
acccaggagaacctcaccctgcctcacccggaccagccggtggtgttcaaccacgtctac
aacattaacgtccccaccacgtccctctgctccgtggacctcgactctcccggcgacggc
gacctcaaacacaagagtgccccgctggaaatgcagaacaccgagcacatggagcatacg
gtggacggggacaatcagattgtcttcacccaccgcatcaatatccccaagcaggcgtgt
ggttgcgacaaccagctgccggacatcaaggatatcctgaacaggctggagatgctggag
tcggagctttctagtctgagagagcagtgcagcagcgggacggtctgctgtggagctcag
gttacaggtgaagtgtccacaaagccattctgtaatggccatgggaattggagcactgac
acctgcagctgcgcatgtgaacctggatggaaagggttcaactgcactgaaccagaatgc
cccaatgactgccaggaccagggccgctgtgtggacggaaaatgtgagtgcttcgagggc
tttggtggcgacgactgcagccttgagctctgtctcctggactgcggtgactatggccac
tgcgtcgaagggtcctgcctctgcgaggacggcttcatcggtgaagcctgcgaccagacc
aactgcctcaacaactgcctgggacggggacggtgcgtagacgatgagtgcgtttgtgac
gagccgtggaccggcttcgactgctccgaactcatctgtccgaacgactgttatgaccgc
ggacgctgcgtcaatggcacctgctactgtgacgagggttacgccggagaagactgcggt
gagctcacctgccctggcaactgcaacaaccgtggcatgtgtgtgaatggccagtgtgtt
tgccagaccggctacagtggggaggattgctcaaagctcacctgtccgaagaactgcaac
gagagaggccattgctttaacgggaagtgcatctgtgatccaggatttgagggtgaagat
tgctccatcctgtcatgccctgacaactgcagcaacaggggccagtgcattgatggagaa
tgtgtgtgtgatgtaggataccaaggcgaggactgtagcgagctctcttgccccaacaat
tgccaagaccgcggccgctgcgtcaacggagagtgcatgtgtgataaaggctatgccggg
gaggactgcagcttcaagacctgtccaaaggcctgcatgggtcacggagagtgcgttgac
ggaaactgcgtgtgctttgttggcttcaccggtgaagactgcggcgagctgacctgcccc
aataactgcctggaccgcggtgactgtgtgaacggacaatgtgtctgtcacaagggtttc
actggtgaggactgcagtgagaagacgtgtcccaagaactgtcttgatagaggttactgt
gtcgatggcgactgtgtgtgttacgaaggtttcaccgggccggactgctcaataatgacc
tgccctaatgactgccacaaccaaggacactgcgagaacggtgtatgtgtttgcaacgag
ggcttcatcggagaggactgctctggagtctcgccacccaaggatctgtcagtagtggag
gtcaccccagaggcggtggacctgacctgggagaatgagatgcgtgtgacagagtacctg
ataacctacgtcccaacggcccctggaggtcttgagcttgacgcccgggtgcccggggac
cagaagatgaccactattcgggagctcgagcctggggtggagtacctaatcagtgtctat
gctctgctcaacaacaagaagagtcttcctgtcagcgctcgggtggctacacatctgcct
gagcctgaagggctcaagttcaagtcagtgcgggagacgtcggtgcaggtgcagtgggac
ccgttggacattaaatttgatgggtggaacctcatcttcagaaacacaaaagaggaagat
ggtgagattcttaactccctcggccgtccagagaccacctttgagcagtcgggcctgggc
cctggccaggagtacgaggtcaagctggaggtggtgaagaacaacaagcgtggaccgcca
gcctcccagaatgtcgtcacaatgatcgatgcccccagccaggtggacgtgcgtgacgtg
acggacaccacggccctggcgacctggttccagcccgtggccgaggtggacggggtcagt
gtctcctacgggcccagctccaaccctgctgaccgcaccgtggttaagctgtcctccacc
gagacccagtaccacctggggggcctcacccccgacacccagtacgaggtgtccctgttg
gctcggaggggggagcggaccagcattcctgtgtacgagtccttcctcacggacctggac
gcccccagggacctacagaccgtggagctgaccgacgagagcatcactctggagtggaag
aacagccgggcgccggtggaaaactaccgcatcaagtacggccccctgtctggaggcgag
cacggagagctgctcttcccccccggacccaaggacaccacccaggccaagatcaccggc
ctgagacccggtacagagtacgggatgggtgtcaccgcggtgacagacgagcgtgagagt
ctgccggcaaccaccaacgcagagaccgccctggacgcccccaaggacctgaccgttgca
gaagtgacggagaccaccatgatgctggagtggaaacgcccgctggccaaactggacttc
ttcagactggtttatgtgtccgctgagggccacaggggtgacgacgtggtccccagcggc
tccgagtcccacatcctgaggggcctcgctcccggcatgctgtacaccgtcagcatcacc
gccgagaggggccacaggaccagcgcaccctccaccatttcagccgccacagaggaggag
aagcctgaggtgaccaacgtcactgtcagcgacgtgtcgtgggacagcttcctcctgtcc
tggtcggctgaggatggggcgttcgaggcctttctgatcgaggttaccgatgcagagacg
ggggccgagtggcaaaaccacacggcgcccggcgatgcacgcagcctccccatctctggc
ctgtcctccaccacttggtacagggccaatctgtacggggtgtacaggggggcggtctta
gaccctgtctttgcagacaccatcacagacctgggctcgcccaaggccatccgcttctcc
gatgtcaccgacacgtcggccacggtccactgggtgcttccgaaggcgcgggtggacagc
aacagggtcacttacgtgcccgctcatggaggtaatgctaagacgctgaccgtggacggc
tcgcaggctcagactgtgctgccaaacctgacccccggggtcacctatgaggtcaccgtg
gtcgctgtcaagggtcaaagggagagtaagcctggatcagacagcgtcaccacagctctg
gataagccccgtggtctgaatgcaataaacatcacagacactgaagctctgctgctgtgg
cagcccgccatcgccaccgtagacggctacgtcatcacctacagcgcagactcagtggct
cctgtgatggagcgcgtgtcaggaaatgtggtggactttgacatgagctctctgacgccg
gcgacccactacacggtgaaggtgtacgcggtgagggacttggccaagagtgctgccact
accacggactttaccactgatgtggacgccccccaggatctggcagccagtaacatccag
acagagaacgccatgctgagctggaagccgcctcgcgccgacatcacggggtacatcctc
agcttcgaggctgcagacggcaccatccgtgaggtggtactgagtcccaccgctgtctcc
tataacatggctccgctcagcgcctcaacagagtacaccgtaaagctgcaggccattgct
ggtccaaagagaagccgagtcgtcactacggtcttcaccaccaccggtgtgctgtaccga
ttcccgaaggactgctcccaggccctgctgaacggcgacaccacatccgacctgtacacc
atctatctgggtggagatgagagccagccgatccaggtctactgcgacatgagcactgat
ggaggcggatggattgttttcctcagacggcagagtggtaaattggagtttttccgcaac
tggaagaattacacaggaggcttcggtgacatgaatgacgaattctggctgggtctttcc
aacatgcataagatcacaaccggaggtcagtatgagctgagagtggacctgagagataag
ggagaaacagcctacgctcaatacgacaagttctctgtttctgaacctcggacccgctac
aaggtccacgtaggaggatacagtggaacagcaggtgactctatgacttaccaccacggc
cgccccttctccacttacgaccatgataacgacatcgctgtcactaactgtgcccagtcc
tataagggagccttctggtacaagaactgccaccgtgtcaacctcatgggacgatatgga
gataacagtcacagcaagggtgtgaactggttccactggaaaggccatgagcactcaatc
gagtttgctgagatgaagatcaggccgtccaacttcagaaacctggaggggaggaggaaa
cggtcatag
DBGET
integrated database retrieval system
