Pungitius pungitius (ninespine stickleback): 119225622
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Entry
119225622 CDS
T07626
Symbol
scml2
Name
(RefSeq) polycomb protein SCMH1 isoform X1
KO
K11465
sex comb on midleg-like protein 2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119225622 (scml2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppug03036
]
119225622 (scml2)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
119225622 (scml2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
SAM_1
RBR
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
119225622
NCBI-ProteinID:
XP_037339513
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Position
4:8319416..8340157
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AA seq
683 aa
AA seq
DB search
MGRTPHRDQKEEKERQSSIPAGAPLDKSNEPFRWEDYLRETSSTAASPTSFKQSRVPPSN
DFKAGMKLEARDPRNSNSVCIATVMGMMGTRLRLRLDGSDNTNDFWRLVDSLEIQPIGSC
ERNGDMLQPPLGFRMNASSWPMFLLRTLSGAEMAPASAFKKEPACPAKNYFLPGMKLEAV
DRKNPYLICPATVGEVRGQEIFIMFDGWRGAFDYWCPFDSRDIFPVGWCALTKHSLQPPG
NFFTLPGALLAPISSTSASLAARRSSSNSSSSMQTSYRLPNPLPPLPVRKGVRGRRPKSQ
TIALLKAAAEAAAAAAVNGASQSPARTGSQAQLAPRPHKKRGPKPKIKKKPQVVQSMGAP
AVAVPPPETRLSSGNVPADNNHSNGSNVVCTVCVYVNKHGNYGPHLDRKLVQQLPDHFGP
APVNAVLQQAVQACVDCTYQPSVMLSFLQSQSHTGGEVIRVRSEHGIRYVKLPSASSTSS
VLRFLENMCLHLESDSLFSSQPFSPFSNNTRFYNRTKSEPLSQPENGLPNDNSSKDASPS
ARPPHTASDYRATKKERPYYPGHTHTPPPLRRVSSNPTDLGQMCPPRRVEAASSTTGSDH
LKPDKEASGNDASSWSVDDVMRFVQEADPQTLGPHVELFRRHEIDGRALMLLRSDVIMKY
MGLKLGPALKLCHHIERLKQIKQ
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgggccgaactccacacagagatcaaaaagaggagaaagagagacaaagcagcatccca
gcaggagctcccctcgacaaatcgaatgaaccgttcaggtgggaagattatctgagagaa
acatcctccactgcagcttcgcctacttccttcaaacagtccagagtccccccctccaat
gactttaaagcaggaatgaaactcgaggcgcgggaccctcgcaactcaaactctgtgtgc
attgcgacggtgatgggcatgatgggtactcgtctgcgcttgcgtctggatggaagtgac
aacaccaacgacttctggaggctggttgactcgttagagatccaaccaatagggagctgc
gagaggaacggagacatgctgcagccaccgctcggtttcaggatgaatgcttcgtcgtgg
cctatgttcctcctgaggacgctgagtggagcagagatggcccctgcctctgcttttaaa
aaggaaccagcctgcccggccaaaaattacttccttcctggtatgaagctggaagcggtg
gacagaaagaacccttacctgatttgtcctgccacagttggagaggtcagaggtcaggag
atcttcatcatgtttgacggctggcgaggggcctttgactattggtgccccttcgactcc
agagacatcttccccgtcggctggtgtgctctgacaaaacacagcttgcagccaccggga
aatttctttaccctccctggcgcgctcctcgcccccatttcctccacctcggcctccctc
gctgcacgccgctcctcctccaactcctcctcctccatgcagacctcataccgactgccc
aaccccttgccgcccctgcctgtgcgcaagggcgtccggggtcgtcgacccaaatcccaa
actatcgctttgctgaaggcggcggccgaagcggcggcggcggcagccgttaatggagcg
tcacagagccccgccagaactggctctcaggctcaactggcccccagaccacacaagaag
agggggcccaagcctaagattaagaagaagccccaagtggtgcaatccatgggggcacca
gcagttgcagttccacctccggagaccagactgagctccggaaacgtcccagcagacaac
aaccatagcaacggctccaatgtagtttgcacagtgtgtgtctatgtaaacaagcacggc
aactacgggccgcacctggacaggaagctggtgcagcagctcccggaccactttggtcca
gctccagtcaacgcggtgcttcagcaggccgtccaggcgtgtgtggactgcacgtaccag
ccctcggtgatgctgtccttcctgcagagccagtcccacaccggaggagaagtcatcaga
gtgcggtcagagcatgggatccgctacgtgaagctgccctccgcctccagcacgtcttcg
gtgctgcgcttcctggagaacatgtgcctgcatctggagagcgacagcctgttcagctcg
cagccattcagccctttcagcaacaacacacgcttctacaacaggaccaagtcagaaccg
ctgtcccagcctgagaatggcctgcccaacgacaactcctccaaggatgcctctcccagc
gcccgcccccctcacaccgcatccgactacagagcaacaaagaaggagcggccatattac
cccggacacacacacacgccgccacctctgcgccgcgtcagctccaaccccaccgacctc
ggccagatgtgtccgcccagacgagtggaggcagctagctcgacaacaggctcagatcac
ctgaagccggacaaggaggcttcagggaacgacgcctcttcctggtcggttgacgatgtc
atgcggtttgtccaagaggcggacccccaaacactcggcccgcacgtcgaactgttcaga
agacacgagatcgatggcagagctctgatgctgctgcgcagtgatgtcattatgaagtac
atgggactgaagctgggcccggcgctcaaactctgtcatcacatcgagaggctgaaacag
atcaaacagtag
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