Pungitius pungitius (ninespine stickleback): 119226265
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Entry
119226265 CDS
T07626
Symbol
rapgef1b
Name
(RefSeq) LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor 1b
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04510
Focal adhesion
ppug04910
Insulin signaling pathway
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
119226265
NCBI-ProteinID:
XP_037339893
LinkDB
All DBs
Position
18:3528827..3558419
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AA seq
1203 aa
AA seq
DB search
MSGKIENKQDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKQLQPEPAAKSAEKPANKKV
SRLEEHEKEVVSALRYFKTIVDKMVVEKKVLEMLPGSASKVLEAILPLVQVEARIQHSSA
LSSCHNRVYQSLANLIRWADQVMLDGIDLEDKENVASVTSVIKAVLDGVKELVKLTIEKQ
EQPSPTTPNKPAPPAIVAESSVTSEKPSAAREQEASKKTAAAATPAEAATDVPEEEVAPP
KPPLPEAKMAELRAQLSADAGQRRPSQKENPPPALPPKKRQSAPSPTRVAVVAPMSRGSS
LPCSVHRQQQDYEQEFLQRRFSGGSQSYGGDSPRLSPCSSMGKLSKSDEQLSSMEQDSGQ
CSRNTSCETLDNTETYDPDYDFLHQDLSAGENXPPVPVGGCLSPLPESHSESSSPVPGQH
PSHPRFSAPASQQQSEYWTPQPNQTNPLRPCRVSAPPALPQKKRRSTQNSPFPDAGSRVL
YERYPSQYDNLSEEELHPTPPFPLFTPISPMPQTNGGVFIAQYVAGEHADVPISPPPLPE
KKSRHILQYMQFVEDYSEPQPSMFYQMPQSESIYEQRNKRFQEVYGFNDSFSSTDSVHEP
VLPPALPPKQRQLASHSSSPSSSSSSSLSCHLQPSVAAMEEAGSALGLSMSVSNSYLIGQ
ASLITPTSLDQVALTSATVLDGGGDGPNGSLAGSLGSVAVCLPSDSSLADSLHASASECA
NDEAGEGEYVNLYSSSRANGELPLSLRETITADDVLQDPNPQMPSTNSKEALDKERRQKS
TESAGSDEEDVDELSLIDHKEIMSRITLKQENDDGPDVRAGSGDILLVHATETDRKDLVL
YCEAFLTTYRTFITPEDLIKKLHYRYTRFCHSPDTFKKRVSKNTFFVLVRVVDELCLVEL
TEDILKQLMDLVFTLVCNGELSLARVLRKNILDKVEQRKLLRYTNSLKPLAARGVSARPG
TLHDFRSHEIADQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVR
SLIIQQEKAQDREKLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGL
EEYCTLIDSSSSFRAYRAALAEVEPPCIPYLGLILQDLTFVHLGNPDLIDGKVNFSKRWQ
QFNILDSMRRFQQVHYELKRNEDIVCFFNDFSDHLAEEALWELSLKIKPRNITRRKTDRE
EKT
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaaaaatagagaacaagcaagactcgcagcggtcccatttgtcctctttcacc
atgaaactgatggacaagttccactctcccaagatcaagaggactccatccaagaagggc
aagcagctgcagccggagccggcagccaagagtgccgagaaacctgcaaacaagaaggtc
agccggctggaggagcacgagaaggaggtggtcagcgccctgcgctacttcaagacgatc
gtggacaaaatggtcgtggagaagaaggtgcttgagatgctccccggctcggccagcaag
gtgctggaagccatcctgcctctggttcaggtggaggcgcgcatacagcacagttcggcg
ctctcttcctgccataaccgggtgtaccagagcctggccaacctcatccgttgggcggac
caggtgatgctggatggcatcgacctggaggacaaggagaacgtggcgtccgtcaccagc
gtcatcaaagcggtcctggatggagtcaaggaattggtgaagctgaccatagagaagcag
gagcagccgtcacccaccaccccgaacaaaccggcgccacctgccatcgtggcggagagc
agcgtgacgtcggagaagccctcggcggctcgggagcaggaggcctcgaaaaagacggct
gcggcagcgactcccgcagaggctgccacggacgtgccagaagaggaagtggcccctccc
aaacccccccttcctgaagccaaaatggcagagctcagagcacagttgagtgctgacgct
ggccaaaggagaccctctcagaaggagaaccctccgccagccctcccccccaagaagcgc
cagtcggccccctcgccgacgcgcgtcgccgtggtcgccccgatgagccgcggctccagc
ctgccctgcagcgtccacagacagcagcaggactatgagcaggagttcctccagaggcgt
ttctctggagggagccagtcctacgggggggattccccgcgcctctctccgtgcagcagc
atggggaaacttagtaagtctgacgaacagctctcgtccatggagcaggacagcggtcag
tgttctcgtaacaccagctgtgagacgctagacaacacggagacttacgacccggattac
gacttcctccaccaggacttgtcagctggggaaaacnctcccccagtccccgtggggggg
tgcctgagcccactgcccgagtcacacagcgagtcctcctccccggtccccggacagcat
ccctcgcacccccgcttcagcgcccccgcctcacagcagcagtcagaatactggaccccg
cagcccaatcaaaccaaccccttacgcccctgccgcgtcagcgcgccccccgcccttccc
cagaagaagcgacgcagcacccagaattcgccgttccccgacgcgggctccagggtgctg
tacgagcgctacccctcccaatatgacaacctgtcggaggaggagctgcaccccacgccg
ccgttcccccttttcacgcccatctcccccatgccccagaccaacgggggcgtgttcatc
gcccagtacgtagccggcgagcacgcggacgtccccatcagcccgccgccactgccggaa
aagaaaagcagacacatcctccagtacatgcagtttgtggaagactactcggagccgcag
ccctcgatgttctaccagatgccgcagagcgagagtatctacgagcagcgcaacaagcgc
ttccaggaggtctacggcttcaacgactccttcagcagcaccgactcggtccacgagccg
gtgctgcctccagcgttgcccccgaaacaaaggcagctggcctcccactcttcctccccc
tcttcctcctcctcctcttccctctcctgccacctccagccgtctgtagcggccatggag
gaggcgggctctgcgctgggcctcagcatgtccgtttctaactcctacctgattggccaa
gcttctttgatcacacccacgagcttggaccaggttgcgttgaccagcgccaccgttctg
gatggcggtggggacgggcccaacggttccctggccggctcactgggctctgtggctgtc
tgtcttccttccgactcgtctctcgctgactctctccacgcctcagcgagcgagtgcgca
aacgacgaggccggggagggcgagtacgtcaacttgtactcatccagccgggccaacggg
gagctgcctctctccctcagagaaacgatcacggcggacgacgtacttcaagaccccaac
cctcaaatgccctccaccaatagcaaagaggctttggacaaggagaggaggcagaagtca
accgagtcggctgggagcgacgaggaagacgtggacgagctctccctcatagaccacaag
gagatcatgagcaggataacactaaaacaggagaacgacgacggccccgacgtccgtgcg
ggatcaggagacattctgttagtccacgcgacagaaacggaccgcaaagatctcgttttg
tactgtgaagcctttctgacgacgtataggacttttataaccccagaggacctcattaag
aagctacactacagatacaccaggttctgccacagtccggacaccttcaagaagcgggtc
agcaagaacactttctttgtgctggttcgtgtggtggatgagctgtgcctggtggagctg
acggaggacatcttgaaacagctgatggacctggtcttcacgctggtgtgcaacggcgag
ctcagcttggcccgcgtgctccgcaagaacatcctggataaggtggagcagcggaagctg
ctgcgctacaccaactcgctcaagccgctcgccgcccgaggggtctccgcaaggcccggc
acgctccacgacttccgcagtcacgagatcgccgatcagctcactctcctcgacgccgaa
ctcttctacaagatcgagattcccgaggtgctgctctgggccaaggagcagaatgaggag
aagagtcccaacctgactcagttcacggagcactttaacaacatgagctattgggtccgc
tcgttgataattcagcaggagaaagctcaggaccgagagaagctgcttctcaagttcata
aagataatgaagcacttaagaaagttgaataatttcaactcctacctagcgattctgtcc
gctctggactcggcccccatccggagattggagtggcagaagcagacttcagagggactg
gaggaatattgcacgttgattgacagctcctcgtccttcagagcgtaccgagcggctctg
gctgaggtggagccgccgtgcatcccctacctgggtctcattctgcaggacttgaccttc
gtccacctggggaaccccgacctcatcgacgggaaggtcaacttctccaaacgctggcag
cagttcaacattctggacagcatgcggcgcttccagcaagtgcactacgagctgaagcgc
aacgaggacattgtctgtttcttcaacgacttcagcgaccacctggcggaggaggccctg
tgggagctgtcgctaaagatcaagcccaggaacatcaccaggcgcaagacggaccgcgag
gagaagacctag
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integrated database retrieval system
