Pungitius pungitius (ninespine stickleback): 119226271
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Entry
119226271 CDS
T07626
Symbol
cacna1bb
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04010
MAPK signaling pathway
ppug04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119226271 (cacna1bb)
04020 Calcium signaling pathway
119226271 (cacna1bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppug04040
]
119226271 (cacna1bb)
Ion channels [BR:
ppug04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119226271 (cacna1bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
119226271
NCBI-ProteinID:
XP_062415023
LinkDB
All DBs
Position
18:11735731..11856600
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AA seq
2389 aa
AA seq
DB search
MPRFAEDLPSRYGGNAGGGGRGGPGAGRGGARGGGAPGGQRVYKQSMAQRARTMAIYNPN
PVKQNCLTVNRSLFIFREDNLIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPASD
KTPMSERLDDTEPYFIGIFCFEAAIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATV
GSDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGV
EFYMGKFHTTCFKNETGEQAAHWPCGLEPPARLCPEGTQCRKYWTGPNFGITNFDNILFA
VLTVFQCITMEGWVDILYSTNDVAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKER
ERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVLLEEEDEIAEEKSPLDGAWYKRKQN
LPVLKRGKVKKGRNDLIGAEEGEDPFADISSVPPPGSPFGRASMKSGGKMDSSSYFRRKE
KRTRFFIRRMVKAPSFYWIVLCLVGLNTLCVAIVHYDQPDWLTTALYTAEIVFLGLFLTE
MSLKMYGLGARNYFHSSFNCFDFGVIVGSICEVIWDMIKPGASFGISVLRALRLLRIFKV
TKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDT
FPAAILTVFQILTGEDWNAVMYHGIESQGGVRRGMFSSVYFIVLTLFGNYTLLNVFLAIA
VDNLANAQELTKDEEEQEEAANKKLALQKALEVKEVSPISAANISITAFVKQNRDALSRR
SSINSIQSHKEQQRSAKAMSVWEQRTNQLRRHNIRTSSEALFNELDPEERLQKSSTLHLH
PDMKTHLDRPLVVEAKNGDKPSRSPEAPREEAGNPRQDGVGDNFHSHPRKHHRHRDRNGE
RGDGGEARGGRHHTHHSRSRDHNGDGAQVRDRRRDSGNGRDGGPGQRHHQQAGSPEEEAK
DGRAGGEERGHRHHHSHRAPREGNGLVANGAQGERRGGGGGGGGGGGGGDSNGERKGRCS
RMVRAQSTLDGDDCKRNKNGAKGHRDRQTDSEEDGLASSPLQPMRSGRSLGEKQEDADNQ
KNSTRASQAGLNSNAIIIPVTVTCPPGDTTIIPVNNIDCDNFGLSEEKKDLEDEEDDAAN
GPRQILPYSSMFIFGQTNPVRRLCHYVVNLRYFEMCILMVITMSSIALAAEDPVQANAPR
NNILKYLDYVFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFACSGT
KGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVI
AVQLFKGKFFYCTDESKSLEKDCRGQFLDYHKDDVAAQPREWKKYDFHYDNVLWAFLTLF
TVSTGEGWPLVLKHSVDATYEDKGPSPGYRMETSIFYVVYFVVFPFFFVNIFVALIIITF
QEQGDKAMSECSLEKNERACIDFAINARPLTRYMPENKQSFQYRMWKFVVSPPFEYAIMT
LIALNTVVLMMKFDGAPGLYDSMLKYLNIVFTALFTLECILKIIAFGPLNYLKAAWNVFD
FVTVLGSITDILVTEIKDKMINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPY
VCLLIAMLFFIYAIIGMQVFGNIDLNEETAINLHNNFQTFFQALTLLFRSATGEAWHEIM
LACLSNRPCDIHSGTVGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDAS
ILGPHHLDEFIRVWAEYDPAACGRICYQDMYKLLRFISPPLGLGKKCPNRVAYKRLVRMN
MPIAEDRTVQFTSTLMALIRTALDIKLASGVLAQHLCDADLKREIHRVWPSLSQKTVDLL
VTPPKYNELTVGKVYAALMIFDHYKQTCAKRLQQQHSGGQQSKLGSLFRPMLPLSHIQEV
EPPICSPKRPLSPQPEPEVKPELLPTTSLTSVNRDSLLNQRSAIKHSQSGDVSQAAQQRP
KARRKLQRGQSEDVPYSTRPQEFVELKQVENLSDSEEYPSLEGHSRAASLPRLNAEYYRS
HPRHVPGTHLAPIVDLSPIRRSASSVAPQRYQEAGLSEYDLERPGLAQVEGQDRAHHHHH
HHRCHRRRDKDKKQTFLDRAESMQPSSTVDSFTDPSAEGLSRERARERDRGRPHERRHHS
SAGEKQRYYSCERYGSREQCHTKSAGPSRSTSPGEGQDAVFVKQHGSSVVLAGPGTLPSG
SSTPGRGRRQLPQTPLTPRPAVSYKTANSSPLQPGAAAATGHHTRCSRGLSEHERLHWGT
DESPVPVTRIGSDPNLSRQSQVASQEALHGEDFQDTVSSHGRGRAARTAASSTASTSHGA
AASPAAAAAQGRAGAVPNGFHFTLGVNSASGPGGRGTGSLREREEEDWC
NT seq
7170 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcttcgccgaagatctccccagccgctatggaggaaacgccggcggcggaggg
agaggcggaccgggcgccggcagagggggagcccggggtggcggcgctccgggcggccag
agggtgtacaagcagtcgatggcccagagagcccggacaatggccatttacaaccccaac
cctgtcaaacaaaactgcctcacagtcaaccgctccctcttcatcttccgcgaggacaac
ctcatcaggaagtacgcaaagcgaataacggagtggcctccattcgagtacatgatcctc
gcaacaattatcgccaactgcatcgtcttggccctggagcagcatctgcccgccagcgac
aagacacccatgtcggaacgcttggacgacacagagccctactttattggaatattctgt
ttcgaggcagccattaagatcatcgccctgggctttgcttttcacaaaggctcctacctc
cgcaacggctggaatgtaatggacttcgtggtcgtcctcacaggaatcctggccacggtg
ggttcggactttgatctgcgaacactgcgagcagtgagagtgctgaggcccctgaaactt
gtgtcaggaatccccagtctccaggtggtactgaaatccatcatgaaagccatggtgcct
ctgctccagatcggcctgctgcttttcttcgccatcgtgatgtttgccatcatcggggtg
gagttttacatgggcaaattccacaccacctgcttcaagaatgagaccggtgagcaagca
gcacactggccttgtggtctggagcctccggcgaggttgtgtcccgaagggacccagtgc
agaaagtactggactggacccaactttggcatcaccaactttgacaacatcctgtttgcc
gtgcttaccgtgttccagtgcatcaccatggagggatgggtggacatcctctacagcacc
aatgatgtagcaggaaacacctggaactggctctacttcatccctctcatcatcattggc
tccttcttcatgctcaacctggtgctcggtgtcctctccggagaatttgccaaagaaaga
gagcgtgtggagaagaggcaggagttcctgaagctccggaggcagcagcagatcgagaga
gagctcaccggctacttggagtggatctgcaaagcagaggaggtgttgctggaggaggag
gatgagattgcagaggagaagtccccgctggacggtgcttggtacaagaggaaacaaaac
cttccagtcctgaaacgaggcaaagtgaagaaaggtagaaacgacctgatcggcgctgag
gagggcgaggatccttttgcagacatctcctccgttcctccccccggctctccgtttggt
cgggctagcatgaagagcggcggtaagatggatagctcctcttacttccggcgtaaggag
aaaaggacgcgtttcttcatccgccgcatggtgaaagctccgagcttctactggatcgtc
ctgtgcctggtgggcctcaacactctttgtgtggccatagtccactatgaccaacccgat
tggctcacaacagccctctacacggccgagattgtgttcctgggtttgtttctgacggag
atgtcgttgaagatgtatggcctcggagcgaggaattatttccactcatcctttaactgc
tttgattttggggtgattgtgggaagtatttgtgaggtgatctgggacatgattaaacct
ggggcctcatttggaatcagtgtactgagagctctgcgactactccggatattcaaagtc
accaaatattggaactcgttaaggaaccttgtggtgtcccttctcaattccatgaagtcc
attatcagcttgctcttcctcctcttcctcttcatcgtggtctttgccctgctgggcatg
cagctcttcggaggacagtttaactttgaagatgagacgccaacaacaaactttgatacc
ttcccagcagccatcctcactgtgttccagatacttactggcgaggactggaacgccgtg
atgtaccacgggatcgagtctcaaggcggcgttcgccgaggcatgttctcctccgtctac
ttcatcgtcctcacgctcttcgggaactacaccctcctgaatgtcttcttggctattgct
gtggataacctcgctaatgcacaggagctgactaaggatgaagaggagcaggaggaggcc
gccaataagaagctcgccctgcagaaggctttggaggtgaaagaagtcagcccgatatct
gcagccaacatctcaatcacggcttttgtaaagcaaaatcgagatgcactctctcgcagg
tcgtccatcaacagcattcagtcacataaagagcagcagcgctcagctaaggccatgtca
gtgtgggagcagaggaccaaccagctgaggagacacaacataaggacaagcagcgaggct
ttgttcaacgagctcgacccggaggaacgcctccagaagtcctccacgctccatctgcac
ccggacatgaagactcacctggaccggccgctcgtggtggaggccaagaacggcgacaaa
cccagcaggtctcccgaagcgccacgggaggaagccggcaacccccggcaagacggggtg
ggagacaacttccactcgcaccccaggaagcaccaccggcaccgcgacaggaacggggag
agaggggatgggggcgaagcccgcggcgggaggcaccacacccatcacagccggagcaga
gaccacaacggcgacggtgcccaggtgagggacaggagacgggacagcggcaacggccgc
gacggaggcccgggacagcggcaccaccagcaggccggctcccccgaggaagaggccaag
gacggtcgggcagggggagaagagagggggcaccgccaccatcactcccatcgtgcacca
agagagggaaacgggctggtggccaacggtgcgcagggagagcggaggggtggaggagga
ggaggaggaggaggaggaggggggggagacagtaatggagagagaaaggggcgctgctct
cgtatggtcagagctcagtccactctggatggagacgactgtaagaggaacaagaatgga
gccaaaggtcacagggacaggcagacggattcggaggaggacggcctcgcctccagtcct
ctgcagccgatgcggagtggccggagtctgggagaaaagcaagaggatgccgacaaccag
aagaactccaccagggccagccaggcgggcctcaacagcaacgccatcatcatccctgtc
accgtcacttgcccgcccggagacaccaccatcatacctgtgaacaacattgattgcgac
aactttggactcagtgaggagaagaaagacctggaggatgaggaggacgacgcagctaat
gggcctcggcagatccttccctacagctccatgttcatcttcgggcaaacaaaccctgtg
cggcggctgtgtcactacgtggtcaacctgcgctactttgaaatgtgcatcctgatggtc
atcaccatgagcagcatcgccctggcagccgaggacccagtgcaagctaacgcgccgcgc
aacaacattctcaagtatctggactatgtctttactggggtcttcacttttgagatggtg
attaagatgattgacttgggactgcttctccatcctggcgcttatttccgtgacctgtgg
aacattctggacttcattgtggtcagcggagctctggtggcctttgcctgctcagggacg
aagggcaaggacatcaacaccatcaagtccctgagggtcctccgagtcctgcggccgctc
aagaccattaaacggcttcccaagctgaaggcggtgttcgactgtgtcgtgaactctctg
aagaacgttctcaacatcctcatcgtctacatgctcttcatgttcatcttcgctgttatc
gctgttcagctcttcaagggcaaattcttctactgcaccgacgagtccaaaagtctggag
aaagactgcaggggtcagttcctggactaccacaaggatgacgtggcagctcaaccaaga
gagtggaagaagtacgatttccactacgacaatgttctctgggccttcctcacgctcttc
acggtgtccactggggagggctggccgctggtcttgaagcactccgtagacgccacttat
gaggacaagggccccagcccgggctaccgcatggagacatccatcttctacgtggtctac
ttcgtggtgttccccttcttcttcgtcaacatatttgtggctttgatcatcatcaccttc
caggagcaaggagacaaggccatgtcagagtgcagcctggagaagaatgagagggcttgt
attgactttgccatcaacgccaggccgctgacgagatacatgccggagaacaagcagtcc
ttccagtacaggatgtggaagtttgtggtgtcgcccccatttgagtacgccatcatgact
ttaatcgctctcaacacagtcgtgctgatgatgaagttcgacggcgccccaggcctgtac
gattccatgctgaaatacctgaacatcgtcttcacagccctattcacgctggagtgcatc
cttaagattattgccttcggcccactgaattacctgaaagcagcctggaatgtgtttgac
tttgtgactgtgctcggaagcatcacagacatcttggtcacggagattaaggacaagatg
atcaacctgagcttcctgcgactgttcagagcggctcgtctcatcaagctgctgcggcag
ggctacaccatccgcatcctgctgtggactttcgttcagtccttcaaggccctgccgtat
gtctgcctgctcattgccatgctgttcttcatctatgccatcatcggaatgcaggtgttt
ggaaacatcgacctgaatgaggagacggcaataaatctccacaacaacttccagacgttt
ttccaagccttgactcttctcttcaggagtgcgacgggcgaggcgtggcatgagatcatg
ttagcgtgtctcagcaaccggccgtgtgatattcactcgggaaccgtggggaaggagtgt
gggagtgactttgcttacttctactttgtctccttcatcttcctctgctccttcctgatg
ttgaacctgtttgtcgctgtcattatggacaactttgagtatctgacgagagacgcctcc
atcctggggccgcatcacctcgacgaattcatccgtgtgtgggccgagtacgaccctgca
gcctgcggaaggatttgctatcaggatatgtacaaattgttgcgttttatctcgcctccc
ttgggcctgggcaagaagtgccccaacagggtggcttataagcgcttggtgaggatgaac
atgcccattgcagaagacaggacggtgcagttcacctccacgctgatggccttgattcgc
accgccctggatatcaaactggcatctggcgtcctggcgcagcatttgtgcgacgctgac
ctgaagagggagatacaccgagtctggcccagcctgtcgcagaagactgtcgacctgctg
gtgacgccgccgaaatacaatgagctgaccgtggggaaagtctatgcagctcttatgatc
tttgaccactataagcagacttgtgccaagagactccagcagcagcattcagggggacaa
cagagtaaactggggtccttgttccgtccgatgctgcccctctctcacatacaggaagta
gagccaccgatctgcagccccaaacggcctctctcacctcagcctgagcccgaagtcaag
cctgaattactgcccaccaccagcctcacctcggtcaacagggattcactactaaaccag
agaagtgccatcaaacattcccagtccggtgatgtctctcaggctgcacaacagaggccc
aaagcccggaggaaactacagagaggccagtcggaggacgtgccgtactccaccagacct
caggagtttgttgaactgaagcaggtggagaacctatccgactcagaggaatatccgagc
ctggaaggccacagcagagcggcttctctgccccgactcaacgctgagtactaccggagc
caccctcgccacgtccctgggacccacctggcaccgatcgttgacctcagtcccatccgg
cgctcggcatcctcggtggcgccgcagcgctaccaggaggccggcctgtccgagtatgac
ctggaacggcccggcttggcccaagtcgagggccaggacagggcccaccaccatcaccac
caccaccgctgccatagacggagggacaaggacaagaagcaaacgttcctggacagagct
gagtcaatgcagccgtccagcactgttgactcgttcaccgacccttcggccgaaggcctg
tccagagagcgggcgagggagcgggaccgcgggcggcctcacgagcggaggcaccactcc
tcggcgggggagaagcagcgctactactcctgcgagcgctacggcagcagggagcagtgt
cacaccaagtccgcggggcccagccgctccacgtctcctggggaggggcaggacgccgtt
ttcgtcaaacagcacggtagcagcgtggtcctagctggccctggaacgctcccctctggt
tcaagcactccaggccgcggtcgcaggcagctcccacagacgcccctcacccctcggccc
gccgtgtcctacaagaccgccaactcctcgccgctgcagcccggggccgccgccgcgacg
gggcaccacacccgctgcagccgcggcctttcagagcacgagcgcctacactggggcacc
gacgagtccccggtacccgtcacccgcatcggttcggaccccaatttgagccgtcagtcg
caggtggcctcccaagaggccctccacggagaggacttccaggacactgtgagcagccat
ggaaggggacgcgccgccagaaccgctgcctccagcacggcctcaacttcccacggagcc
gccgcttcgcctgccgccgccgccgcgcaggggagggcgggcgcggtcccaaacgggttc
cacttcaccctcggggtcaactctgcgtccgggcctgggggccgaggaacgggaagtctc
agggagagggaagaggaggactggtgctaa
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