Pungitius pungitius (ninespine stickleback): 119226308
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Entry
119226308 CDS
T07626
Symbol
rbb4l
Name
(RefSeq) histone-binding protein RBBP7
KO
K10752
histone-binding protein RBBP4
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03082
ATP-dependent chromatin remodeling
ppug03083
Polycomb repressive complex
ppug04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119226308 (rbb4l)
03083 Polycomb repressive complex
119226308 (rbb4l)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
119226308 (rbb4l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppug03036
]
119226308 (rbb4l)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
119226308 (rbb4l)
Histone modification proteins
HAT complexes
HATB complex
119226308 (rbb4l)
HDAC complexes
Sin3A-HDAC complex
119226308 (rbb4l)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
119226308 (rbb4l)
PRC2.2
119226308 (rbb4l)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
119226308 (rbb4l)
Heterochromatin formation proteins
Other heterochromatin formation proteins
119226308 (rbb4l)
Chromatin remodeling factors
NuRD complex
119226308 (rbb4l)
NuRF complex
119226308 (rbb4l)
NuRF complex (fruit fly)
119226308 (rbb4l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_RIG_1st
ANAPC4_WD40
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
MIOS_WD40
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
119226308
NCBI-ProteinID:
XP_037340027
LinkDB
All DBs
Position
4:1430971..1436932
Genome browser
AA seq
427 aa
AA seq
DB search
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDY
AVHRLVLGTHTSDEQNHLVIASVQVPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNHCIIATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLKGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDIGAGPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNTTSKASHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDNTPAS
ELEAQGS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaaagaggtgtacgatgatgcggtggaagaaagggtcatcaatgaggagtac
aagatctggaagaaaaacacaccgttcctgtacgatctggtgatgactcatgcgctggag
tggcctagccttacggtccagtggcttccagatgtcaacaggccggaggggaaggactat
gccgttcacaggctggttttggggacccatacatcagatgagcagaaccaccttgtgatc
gccagcgtccaagtaccaaacgatgacgcccagttcgatgcctcgcactacgacagcgag
aaaggagcagagtttggtggatttggttccgtcagtgggaaaattgagatcgagatcaag
atcaatcacgagggagaggtcaaccgagctcggtacatgccacagaaccactgcatcatc
gccaccaagacacccacctctgacgtgctggtcttcgactacaccaagcacccttcaaag
ccagaccccagtggggagtgtagtcctgacttacgactgaaaggccaccagaaagaaggc
tacggcctctcctggaatcccaacctcagcggcaacctcctcagcgcctccgacgaccac
accatctgtctgtgggacatcggggccggcccaaaggaggggaagattgtggatgccaag
accatcttcaccggccacacggcggtggtggaagacgtctcctggcatctgctccatgaa
tcgctgttcggctcagtggccgacgaccagaaactgatgatatgggacacccggtccaac
accacatccaaagccagccacgcagtggacgcccacaccgcagaggtcaactgtctgagc
ttcaacccgtacagcgagttcattctggccaccggttctgctgataagactgtcgcactg
tgggatctcaggaacctcaaactgaagctccactccttcgagtcccacaaggatgaaatt
ttccaggtccaatggtcccctcacaacgagacgatcctcgcctccagcggaaccgaccgg
cgcctcaacgtctgggatctcagtaaaatcggggaggagcagtcggcagaagatgctgag
gatggcccgcctgagctgctgttcattcacggcggccacacggcaaagatctccgacttc
tcctggaaccccaacgagccctgggtcatctgctccgtgtcagaggacaacatcatgcaa
gtctggcagatggccgagaatatctacaacgacgaggagccagacaacacccccgcatcg
gagctggaggctcagggctcataa
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