Pungitius pungitius (ninespine stickleback): 119226353
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Entry
119226353 CDS
T07626
Symbol
sbno1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppug03036
]
119226353 (sbno1)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119226353 (sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
BUD22
Helicase_C
Motif
Other DBs
NCBI-GeneID:
119226353
NCBI-ProteinID:
XP_062414901
LinkDB
All DBs
Position
18:1350521..1363132
Genome browser
AA seq
1437 aa
AA seq
DB search
MRLERLIKKDGVSSAERRGQQTAEPERREWLLDCQMDPGQDLLLAALSESGICPNDFGLF
DVDSQDAAQPSTAQQSISIGALDVGVGAESVEVIRSEPPAPVPIVTIRHKPQPSTTTFVL
NQLNQLPSLGANVTKQSVANPIKHTITVTKVVHVTNSALRGCSSPSVTTTPPSASTLVPS
NREQQIQLKDLLRSGNVKSAGLKGNSLMELMRLKPPPNIAPPVATATATGDMNNGIKKEV
FGKDAARIWINDDIKMQTFPHSLKIPGMKEEDEPEEEEEDELGHAETYAEYMPMKLKIGQ
RHPDPVVETSSLSSVNPPDVWYRLSISEEVIDRGCLSALQLEAITYAAQQHETFLPSGDR
AAYLIGDGAGVGKGRTIAGVIYENYLLGRKRSLWFSVSNDLKYDAERDLRDIGAKNIQVH
SLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRFQQLLHWCGEDFDGVIV
YDECHKAKNVCPIGSSKPTKTGLAVLELQNKLPKARVVYASATGASEPRNMAYMNRLGIW
GHKTPFREFGNFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFTGVTFKIEEVPLTQQY
INMYNKSVRLWVSARERFQQAANLMDAEQRMKKSMWGQFWSAHQRFFKYLCIASKVRRVV
QLAREEVQNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGVLQSLIEKHFPAPDR
QKLYSLLGIDLPTKKAPAETAAQQEQKGKKRKGPEVKKQQQKKKPRQHGGLSGTSSEESQ
SEDSDRESVKDSDESVKSLSSGDEDDDFNPFRDESDDDEEDDPWLFRKEPKKGKEKKKKK
RKRSVDPDSIQSALLASGLGSTRPAFTAPVAPPSTPAIVKAESPLTCLTSQDAVEHAQRM
KKELLDKLEDLAEDLPPNTLDELIDELGGPENVAEMTGRKGRVVSNDDGSITYESRSELD
VPVEILNLTEKQRFMDGEKNIAIISEAASSGISLQADRRVKNQRRRVHMTLELPWSADRA
IQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLGALTHGDRRATETRDLSR
FNFDNKYGRNALEIVMKSIVKLDSPLVSPPAHFKGDFFKEIQSGLIGVGLINVEDRSGTM
SLDKDYNNMGKFLNRILGMEVQQQNALFQYFSDTLAAVILEAKKSGRYDMGILDLGNGDE
KVKKVDCRKFLTPGYTTSGHVELYTVSVERGMSWEEATHAWADQSGPDDGFYVQMRNNKK
TAILVKEVNAKKRLFLVYRPNTGRQVKLEVYADIKKKFKKVLSDDAKQHWMDQYTSSAQI
CSHAYWRGNCKKASVGLQCEVGLRCRTYYVLCGSVLSVWNELEEVLTPVSGTNVKVQIVR
LRTEDGQRIVGLIIPANCVSPLSNKLSTSDQSQQLAVQELQKRQQLHPQSLCHAPST
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgcggctggagcgtttgataaaaaaagatggcgtgagctcagcggagcgaagaggacaa
caaactgccgaaccggagcggcgagagtggctgctggactgtcaaatggatcctggtcag
gatttacttcttgctgccctgagtgagagtggcatttgtccaaatgattttggcctgttt
gatgttgattctcaggatgctgcacagccctctacagcccagcaatcgatctctatcggc
gccctggatgtcggtgtgggggcagagtcggtggaagttattcgaagtgagcctcctgct
ccagtccctatagttactatcaggcacaaacctcagccatcgaccaccacgtttgtctta
aatcagctgaatcagttgccgtcacttggagctaatgtgaccaaacaatcagttgcaaac
cccatcaaacatactataacggtcaccaaagtggtccatgtgactaactcagccctgcga
ggatgttcgagcccctcagtcacaactactcctccgtcagcgtctacattagtgccttct
aacagagagcagcagattcagttgaaagacctccttcggtccggcaatgtgaagagcgcg
ggtctgaagggcaacagcctgatggagctcatgaggctaaagccgccacccaacattgct
ccaccagtagcaacggcaacagccacaggtgatatgaacaatgggatcaagaaggaagtt
tttggtaaagatgctgccaggatctggattaatgatgacatcaaaatgcaaaccttcccg
cactctctgaaaatccctgggatgaaagaggaggatgagcccgaggaggaagaggaggat
gaactgggccacgcagagacttatgcggagtacatgccaatgaaattgaagatcggccag
cggcatcccgaccccgtggtggagaccagctcgctgtccagtgtcaaccctccggacgtg
tggtacaggctgtccatctcggaggaagtcatcgatcgaggctgcctgtcggctctgcag
ctggaggcgataacgtatgcggctcagcaacatgagactttcctccccagcggcgatcgg
gctgcttatttaatcggagatggtgccggtgtggggaaaggtcggaccattgcgggagtc
atttacgagaactaccttttaggcaggaagagatctctctggtttagtgtctcaaatgac
ttgaagtacgacgctgagagggacctgagggacatcggagccaaaaacatccaggttcac
tcgctgaacaagttcaaatacgggaagatctcctcaaaacacaatgggagtgtgaagaaa
ggtgtgatattcgccacatactcttctctgattggagagagccaatcaggagggaagtac
aagaccagattccagcagcttctccactggtgcggagaggacttcgacggagtcattgtg
tatgacgagtgtcacaaagccaaaaacgtgtgtcctatcggatcgtccaaaccgaccaaa
accgggctcgctgtgttggaactgcagaacaagctccccaaggctcgggtcgtgtatgcc
agtgctacaggtgcctctgaaccgcggaacatggcctacatgaaccgtctgggcatctgg
ggccataagacccccttcagagagtttggcaactttatccaagccgttgagcgcagaggt
gttggcgccatggagatagtagccatggacatgaaactcagggggatgtacattgccagg
cagttgagttttaccggtgtgacgtttaagattgaggaggttcccctgacccagcagtac
atcaacatgtacaacaagtctgtgaggctgtgggtcagtgcccgtgagaggttccagcag
gcggcgaacctgatggacgcggagcagcgcatgaagaagtccatgtggggccagttctgg
tccgctcaccagaggttcttcaaatacctctgcattgcctccaaggtccgccgagtggtg
cagctcgccagagaggaggtccaaaacggaaagtgtgtggtcatcgggcttcagtccacc
ggagaagccagaacgctggaggccttggaggaaggaggaggagagctcaacgactttgtg
tcaactgcaaaaggtgtgctgcagtccctcattgagaagcactttccagctcctgacaga
cagaagctttacagcctgctcggcatcgacctcccgaccaagaaggcccccgctgagaca
gcggctcagcaggaacagaagggaaagaagaggaaaggtccggaggtgaagaagcagcag
cagaagaagaaaccccgccagcacggcggcctgtcgggcaccagctcggaggagagccaa
tcagaggactcggacagagagtcggtgaaggacagcgacgagagcgtaaagtcgctcagc
tcgggggacgaagacgacgacttcaacccgttcagagacgagtccgatgacgacgaggaa
gacgatccgtggctcttcagaaaggaaccgaagaaagggaaagagaagaagaagaaaaag
aggaagaggagcgttgatcctgactccattcaaagtgccttgttggcctctgggctgggc
tccaccaggcctgctttcactgcccccgttgccccccccagcacccccgccatagtcaag
gcagagagtccgctcacctgtctgacgagccaggacgccgtggaacacgctcagaggatg
aagaaagagctgctggacaaactggaagatctggctgaggatcttcctcccaacactctg
gacgagctgatcgacgagctggggggccccgaaaacgtagctgagatgacgggtcgcaaa
ggtcgcgtggtcagcaacgacgacggcagcatcacgtacgagtcccgctccgagctggac
gtcccggtggagatcctcaacctcacagagaagcagaggttcatggacggagagaagaac
atagccatcatctcggaagcggccagctctggtatttccctgcaggcggatcggcgggtg
aagaaccagcggcggcgggtccacatgacactggagctcccgtggagcgccgacagagcg
atccagcagttcgggagaactcaccggtcaaaccaggtcacggctccggagtacgtcttc
ctcatatcggagctggcgggggagcagagatttgcctccatcgttgccaaaagacttgaa
agcctgggagctctcacacacggagacagaagggcgacggaaacacgagatctcagccgg
ttcaattttgacaacaaatacggaagaaacgccctggagatcgtgatgaagtccatcgtg
aagctggattctcccctcgtgtcgccccccgctcactttaaaggagacttcttcaaagag
attcaaagtggattaataggtgtgggcctcataaacgtggaggacaggtctggcacaatg
tcactggacaaagactacaacaacatggggaagttcctcaaccggatcttgggcatggag
gtccagcagcagaacgccttgttccagtacttctccgacacgctggcagccgtcattctg
gaagccaagaagagcggcagatacgacatgggcattctggatctgggcaacggggacgag
aaggtgaagaaggtggactgcaggaagtttctaacgccgggctacaccacgtccggacat
gtggagctctacactgtgagtgtggagagggggatgtcctgggaggaggccacgcatgcc
tgggcagatcagagcggaccagacgacgggttctatgttcagatgaggaacaacaagaaa
actgccatcctggtgaaggaagtgaacgccaagaagaggctcttcctggtttacaggccc
aacaccggccggcaggtcaaactggaggtctacgcagacatcaagaagaagttcaagaag
gtgttgtccgacgacgccaagcaacactggatggatcagtacacatcgtcagctcagatc
tgctcccacgcttactggcgcggtaactgcaagaaggcgtctgtggggctgcagtgcgag
gtcggcctgcgctgccggacctactacgtcctgtgcggctcggtgctcagcgtgtggaac
gagctggaggaggttctcactccggtcagcggaaccaacgtgaaggttcagatcgtcaga
ctgaggacagaagacggacagaggatcgtcggactgatcattccagcgaactgcgtgtct
ccgctgagcaacaagctctccacgtcggaccagagccagcagctcgccgtgcaggagctt
cagaagcgccagcagctccacccgcagagcctctgtcacgctcccagcacatag
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