Pungitius pungitius (ninespine stickleback): 119226359
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Entry
119226359 CDS
T07626
Symbol
zswim6
Name
(RefSeq) zinc finger SWIM domain-containing protein 6
KO
K25704
zinc finger SWIM domain-containing protein 6
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ppug03037
]
119226359 (zswim6)
Cilium and associated proteins [BR:
ppug03037
]
Other cilia and associated proteins
Stereociliary proteins
119226359 (zswim6)
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Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
ZSWIM_N
TPR_ZSWIM8
SWIM
Motif
Other DBs
NCBI-GeneID:
119226359
NCBI-ProteinID:
XP_037340163
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All DBs
Position
18:complement(1446012..1464654)
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AA seq
1120 aa
AA seq
DB search
MAERVQQPPAKRLCCRPGYSAACRQGQRAAGATCGSGAAQGDSSKTRNPETLLDIAARRV
AEKWPFQRVEERFERIPEPVQRRIVYWSFPRSEREICMYSSFNTGGEEVGSGGDSGDETR
LPFRRGIALLESGCVDNVLQVGFHLSGTVREPATPSEAELVCNVSVSFDRCKITAVTCSC
GNKDIFYCAHVVALSLYRVRKPEQVKLRLPISETLFQMNRDQLQKFVQYLITVHHTEVLP
TAQKLADEILSQNSEINQVHGAPDPTAGASVDDDNCWHLDEEQVQEQVKLFLSQGGYHGS
GKQLNLLFSKVREMLKMRDSNGARMLTLITEQFMGDPRLALWRQQGTTMTDKYRQLWDEL
GALWMCIVLNPHYKPEQKGFWLRQLRRWNGVDVCPLEDGNHGSELTNLTNALPQGPPGHP
DPLTRPHRTVFTRAIEACDLHWQDPHLQHIITEDHYANYCYHDNLNSSLFDARGWPLWHE
HVPTACARVDALRSHGHPKEALRLAIAVVNTLRRQQQKQAEFFRTHKKELLPKGVTSVTN
MEGWVGHPLDPIGTLFSTLMETGRGGEDAALLDFSGSGRRPEQRFLEDGESFASLAVETA
LIGLGQQRVMPEGLYAQEKVCRHEEQLLARLQEVHLDDALVKIFRRQAALLLDAGPYSGL
GELLYRESVPMHTFAKYLFTSLLPHDAELAYKLALRAMRLPVLESTPPPGDLSRPHHIVS
VASNRLPRWFTLSHIETQQCELASTMLTAAKGDARKLETVLESIQKNIHSSSHIFKLAQD
AFKIATLMDSLPDITLLKVSLELGLQVMRMTLSTLNWRRREMVRWLVTCATEAGVFALDS
IMQSWFTLFTPTEATSVVASTVMSNSTIVRLHLDCHQQENLANSARTLALQCAMKDPQNC
ALSALTLCEKDHIAFETAYQIVLEAASTGMNYTQLFTIARYMEHRGYPMRAYKLATLAMT
HLNLSYNQDTHPAINDVLWACALSHSLGKNELASVIPLVVKSVKCATVLSDILRRCTLTT
SGMVALHGRRAAGKLMPLDKAPLRQLLDATIGAYINTTHSRLTHISPRHYSEFIEFLGKA
RETFLMAHDGHVQFTQFIDNLKQIYKGKKKLMMLVRERFG
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgcgtacagcagcccccggccaagcggctctgctgtagaccgggatacagc
gcggcgtgtcggcagggccagcgggccgcgggggcgacgtgcggctccggagccgcgcag
ggcgactccagcaagacccggaacccggagaccctgctggacatcgcggcgcggagggtc
gcggagaagtggccgtttcagcgggtggaggagcgcttcgagcggatcccggagcccgtc
cagaggcgcatcgtctactggtcgttcccgaggagcgagcgggagatctgcatgtactcg
tcgttcaacaccggcggggaggaggtcggcagcggcggggacagcggcgacgaaacgcgg
ctgcccttccggcggggcatcgctctgctggagagcggctgcgtggacaacgtgctgcaa
gtcggcttccacctcagcggcaccgtgagggagccggccaccccctcggaggcggagctg
gtctgcaacgtcagcgtcagcttcgaccgctgcaaaatcaccgcggtgacgtgcagctgc
ggcaacaaggacatcttctactgcgcccacgtggtggcgctctcgctgtaccgggtacgg
aagcccgagcaggtcaaactgcggctgcccatctcggagacgcttttccaaatgaaccgg
gaccagctgcagaagttcgtgcagtacctgatcaccgtgcaccacaccgaggtgctgccc
acggcgcagaagctggccgacgagatcctgtcgcagaactctgagatcaaccaggtccac
ggagctccggacccgacggcgggcgccagcgtggacgacgacaactgctggcacctggac
gaggagcaggtccaggagcaggtcaagctcttcctctcgcagggggggtaccacggctcg
gggaagcagctcaacttactgttcagcaaggtgagggagatgctgaagatgagggactcc
aacggggcgcgcatgttgacgctgatcacagagcagttcatgggcgacccccgcctggct
ctgtggaggcagcaagggaccaccatgacggacaagtacaggcagctgtgggacgagcta
ggggccctgtggatgtgcatcgttctgaacccccactacaaacccgagcagaagggcttc
tggctgcgacagcttcgcaggtggaacggcgtggacgtctgtcccttggaggacggtaac
catggcagcgagctgaccaatctgaccaacgccctgccccagggccccccaggccaccca
gatccgctcactcgccctcaccggaccgtgttcacgcgggccatcgaggcctgcgacctc
cactggcaggacccccacctgcagcacatcatcaccgaggaccactacgccaactactgt
taccacgacaacctcaacagctccctgttcgacgcgcgagggtggcccctgtggcacgag
cacgtcccgacggcgtgcgcccgagtggacgcgctgaggtcacacggccacccgaaggaa
gcgctgcggctcgccatcgccgtggtgaacacgctgcggcggcagcagcagaagcaggcc
gagttcttccgcacgcacaaaaaagagctgctgcccaaaggcgtcacgtcggtcaccaac
atggagggctgggtggggcaccctctggaccccatcggcaccctgttcagcaccctgatg
gagacggggcggggcggcgaggacgcggcgctgctcgacttctcaggctcagggaggagg
ccggagcagcgcttcctggaggacggcgagtcgtttgcgtcgctcgccgtggagacggct
ctgattggcttaggccagcagagggtgatgccggagggcctctacgcgcaggagaaggtg
tgccgccacgaggagcagctcctggcccggctgcaggaggtccacctggacgacgcgctg
gtgaagatcttcaggcgccaagccgctctgctgctggacgccggtccctacagcggtttg
ggggagctcctctacagagaaagcgtccccatgcacaccttcgccaagtatctcttcacc
tcgctgctacctcacgacgccgagctggcgtacaaacttgcactgagggccatgcggctg
ccggtcctggagtccacgcccccccccggcgacttgtcccgccctcaccacatcgtgtcg
gtggcgtccaaccggctcccccgctggttcaccctcagccacatcgagacccaacagtgt
gagctggcctccaccatgctcaccgctgctaaaggcgacgcccgtaaactggagacggtg
ttggagtcgatccagaagaacatccactcctcgtcgcacatcttcaagctggcccaggac
gccttcaagatcgccaccctgatggacagcctgccggacatcacgctgctcaaagtctcc
ctggagctgggtctccaggtgatgaggatgacgctgtccacgttgaactggcggaggagg
gagatggttcggtggctcgtcacttgtgccacggaggccggtgtgtttgcgctggacagc
atcatgcagagctggttcaccctcttcacccccaccgaggccaccagcgtggtggccagc
accgtcatgtccaacagcaccatcgtccgcctgcacctggactgccaccagcaggagaac
ctggccaactcggcgcgcacgctggcgctgcagtgcgccatgaaggacccgcagaactgc
gccctgtcggcgctcacgctctgcgagaaggaccacatcgccttcgagacggcctaccag
atcgtgctggaggcggcgtccacggggatgaactacacgcagctgttcaccatcgcgcgc
tacatggagcaccggggctaccccatgagggcctacaagctcgccacgctggccatgacg
cacctgaacctcagctacaaccaggacacgcacccggccatcaacgacgtgctgtgggcg
tgcgccctcagccactcgctgggcaagaacgagctggcgtcggtcatccccctggtggtg
aagagcgtgaagtgcgccacggtgctgtcggacatcctgcggcgctgcacgctgaccacg
tcgggcatggtggcgctgcacggccgccgggccgccggcaagctgatgcctctggacaag
gcgccgctcaggcagctgctggacgccaccatcggggcgtacatcaacaccacgcactcg
cggctcacgcacatcagcccgcggcactacagcgagttcatcgagttcctgggcaaggcg
cgcgagacgttcctcatggcgcacgacggacacgtccagttcacgcagttcatagacaac
ctgaagcagatctacaagggcaagaagaagctgatgatgctcgtcagagaacgcttcggt
tga
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