Pungitius pungitius (ninespine stickleback): 119226388
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Entry
119226388 CDS
T07626
Symbol
scarb1
Name
(RefSeq) scavenger receptor class B member 1 isoform X1
KO
K13885
scavenger receptor class B, member 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03272
Virion - Hepatitis viruses
ppug04145
Phagosome
ppug04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
119226388 (scarb1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119226388 (scarb1)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
119226388 (scarb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119226388 (scarb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppug04147
]
119226388 (scarb1)
Membrane trafficking [BR:
ppug04131
]
Endocytosis
Phagocytosis
Scavenger receptors
119226388 (scarb1)
Exosome [BR:
ppug04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119226388 (scarb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD36
Staphylcoagulse
PorA
DUF7476
Motif
Other DBs
NCBI-GeneID:
119226388
NCBI-ProteinID:
XP_037340225
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All DBs
Position
18:complement(809709..817649)
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AA seq
509 aa
AA seq
DB search
MLLIAMAINKTKVAVGFIVAGALTVVSGVFFLIVGPMVMKDQVIKNTVIDPKNEMSYTMW
KDVPVPFFMSVYFFNVLNPKEVLAGEKPMVEQRGPFVYRKQIQKDNITFHANGTVSYREY
RRFFFEPSMSSGDESQVVTIPNMLVLGAAVMMENAPFPLRLMISATFKTFKEGPFLTKTV
GELMWGYDSGLVDFLNKYLPGMLPSTGKFGLFAEFNNSNTGLFTIHTGKDDIRKVHKVDS
WNGLTKLSNWNSPQCNMINGTAGQMWPPFMTRESTLPFYSPDACRSLELVYQRDGVMEGI
PLYRYVAPKTLFANGSEYPPNEGFCPCRQSGLLNVSSCRHDSPVFLSHPHFFNADPVLLD
SVQGLRPTEDEHGLFIDIHPLTGVPLNVSIRLQLNLYMKKVSAITETGKISEVVMPMIWF
EESGYIDGPILSTFHTNLVVLPTVMEAMQYGFIALGLATILIASLVHHREKRARSHVTMT
FSGKDNPVSNKERAEGSRPPTEEKCVINK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgcttcttattgccatggcgatcaataagaccaaagtggcggtggggttcatagtggcg
ggggctctgacggtggtctccggagtgttttttctcattgtggggccgatggtgatgaaa
gatcaagtgattaaaaacacggtgatcgacccgaagaacgagatgtcctacaccatgtgg
aaggacgtcccggtgcccttcttcatgtccgtctacttcttcaacgtcctcaaccccaag
gaggtgctggctggagagaagcccatggtggagcagaggggccccttcgtctacaggaaa
cagatccagaaggacaacatcacgttccacgccaacgggacggtgtcctaccgcgagtac
cgccgcttcttcttcgagccgtccatgtcctcgggggacgagtcccaggtcgtcaccatc
cccaacatgttggtgctgggcgcggccgtcatgatggagaacgcccccttccctctgcga
ctgatgatcagcgccaccttcaagaccttcaaggaggggcccttcctcaccaagacggtg
ggggagctcatgtggggctacgacagcggcctcgtggacttcctcaacaagtacctgccc
ggcatgctgccctccaccggcaagttcggcctctttgccgagtttaacaactcaaacacc
ggcctgttcaccatccacacggggaaggacgacatcaggaaggtccacaaagtggactcg
tggaacggcctgaccaagctgagcaactggaactctcctcagtgcaacatgatcaatgga
acagctggacagatgtggcctcccttcatgaccagagagagcacgctgcccttctacagc
cccgacgcatgcagatccctggagctggtctaccagcgggacggcgtgatggagggaatc
cctctgtaccgctacgtggctccaaagaccctgttcgccaacgggtcggagtaccccccc
aacgagggcttctgcccctgcaggcagtcgggtctgctgaacgtcagcagctgccgacac
gactccccggtcttcctctctcatcctcacttcttcaacgccgacccggtgctgctggac
tctgtgcaaggcctccgacccacggaggacgagcacggcctcttcatcgacatccacccg
ctgaccggcgtccccctcaacgtgtccatccgcctgcagctcaacctctacatgaagaag
gtgtcggccattacagaaactggcaagatctccgaggtggtgatgccaatgatctggttt
gaggagagcggctacatcgacgggcccatcctctccaccttccacaccaacctggtggtg
ctccccaccgtgatggaggccatgcagtacggcttcatcgccctcggcctcgccaccatc
ctcatcgcctcgctggtgcaccacagggagaagagggctcgttcacatgtgaccatgacg
ttctcaggaaaagacaaccccgtctccaataaagagcgagcagaaggctcacgaccccca
acggaggagaaatgtgtcattaataaataa
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