Pungitius pungitius (ninespine stickleback): 119226493
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Entry
119226493 CDS
T07626
Name
(RefSeq) rab GTPase-activating protein 1 isoform X1
KO
K20284
Rab GTPase-activating protein 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119226493
Membrane trafficking [BR:
ppug04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
119226493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
PTB
UPF0242
Motif
Other DBs
NCBI-GeneID:
119226493
NCBI-ProteinID:
XP_037340424
LinkDB
All DBs
Position
18:8274374..8323562
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AA seq
1103 aa
AA seq
DB search
MDDKGSVGKISVSSDSVSTLNSEDFVLVSRLGDETPSSTNNGSDDEKTGLKVISEEGVSF
KIVGNGSEQQLQRELEDVLMDPSVADTGLKSEAGMENFGGGDRGALPATASLPATASLPA
TASPVPPGSDPLSAQPPKLEMVLPVQTAQESELNERSYRADESSSDGSPGSPIPDEDSVV
FSQLTYLGCASVNAPRSEVEALRMMSILRGQCQLPLDVTLSVPGVSEGTVRLLDPNTSTE
IANYPIYKILFCVRGHDGTPESDCFAFTESHYNAEIFRIHVFRCQIQEAVSRILYSFATA
FRRSAKKALLSSQQPAPLTPDSDLFTFTVSQEIKEDDGKGTFSAVAKDKDKQSFKLRAGM
DKKIVIYIQQTSNKELAIERCFGLLLSPGKNVKNSDMHLLDLESMGKSSDGKSYIITGSW
NPNTPQFQPVNEETAKDKFMYMTTAVDLVITEVEEPVRFLLETRVRVCSPNDRLFWPFSK
RNYTETFYLRLRQMERKERKSPASDTLYEVVSLESETEREKRKTTASPGTMPTRTGTAVS
SPPEDDEEEDNDEPLLSGSGDVSKECAEKILETWGDLLSKWHLNLSVRPRQLPALVRSGI
PEALRGEVWQLLAGCHNNDHQVEEYRTLITKESPQDSAITRDINRTFPAHDYFKDTGGDG
QDSLYKICKAYSVYDEEIGYCQGQSFLAAVLLLHMPEEQAFSVLVKIMFDYGLRDLFKQN
FEDLHCKFFQLERLMQEYIPDLYNHFLNVGLEAHMYASQWFLTLFTAKFPLYMVFHIIDL
LLCEGISVIFNVALALLKTSKDDLIHTDFEGALKFFRVPVPKRYRSEENAKKLMELACSI
KISQKKLKKFEKEYHTLREQQEQQEAPIERYERENRRLQDANMRLEQENDDLAHELVSSK
IALRRDLDNAEEKADALNKELLLTKQKLVDSEDEKRRLEEESAQLKEMCRRELDKSESEI
KKNGSIIGEYKQICSQLSERLEKQQTANRGELEKIRSKVDGCERCSSLFNKEGRVRAAVT
RATAGGAEEADEEKEDLKNQLREMELELAQTKLQLVEAECKIQDLEHHLGLAFNEVQAAK
KTWFNRTLSSIKTATGAQGKETT
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaagggctcggtggggaagattagcgtgtcttcggactctgtttccactctc
aacagtgaggactttgtccttgtgtcccggctgggggacgagaccccctcctccactaat
aatggtagtgatgacgaaaagacaggactgaaggtgatttctgaggaaggggtcagcttt
aagatcgtggggaatggaagtgagcagcagctccagagggagttagaggatgtcctcatg
gacccatctgtagctgacactggcctcaaatcagaagcgggaatggaaaactttggcggg
ggcgaccgcggcgcacttcctgccacggcgtcacttcctgccacggcgtcacttcctgcc
acggcgtcacctgtgcctccgggctccgaccccctgagtgcccaaccacccaagttggag
atggtgctccctgttcagacggcgcaggagagtgagctgaatgagcggtcgtaccgagcg
gatgagtcctcgtcagacggaagtcccggcagccccatcccagacgaggacagcgttgtg
ttcagccagctgacatacctcgggtgtgcctcagtcaacgccccccgcagtgaggtggag
gcccttcgtatgatgagcatcctcagagggcagtgccaactccccttggatgtcacactg
tctgtgccaggcgtgtccgaaggcactgtcaggttgctggaccctaataccagtacagag
atcgccaactacccgatctacaagattctgttctgcgtgcgaggccacgatggcacaccg
gagagcgactgctttgccttcaccgagagccactacaatgcggagatctttaggatccat
gtgttccgctgccaaatccaagaagcggtgagtaggatactgtacagctttgccacggcg
ttccggcggtcagctaagaaggcacttctgtcatcacagcagcctgcaccgctgacccct
gacagtgacctgttcaccttcactgtcagtcaggaaattaaagaggatgatggcaaaggc
accttcagtgctgtagcaaaagacaaggacaagcagagcttcaagctgcgtgcaggaatg
gacaagaaaattgttatttatatccagcagacctctaataaggaactggctattgagagg
tgtttcggtctcctgctcagcccagggaagaatgtgaagaacagcgacatgcacctgcta
gatctggagtcaatgggaaagagctccgacgggaagtcttacatcatcacaggaagttgg
aaccccaacacgcctcagttccagcctgtgaatgaggaaacggccaaagataaattcatg
tacatgacgacagcggtggacctggtgatcacagaggtagaggagccagtccgtttcctg
ctggagacgagggtcagagtgtgctccccaaatgacaggctgttctggcccttcagcaag
cgcaactacactgagaccttctaccttagactacggcagatggagcgtaaggagcgtaag
agtcctgcctctgacacactttatgaagtggtgagtctggaaagtgagactgagagagag
aagcggaagaccactgctagccccggcacaatgcccaccaggactggtaccgcagtgtct
tccccgcccgaggatgacgaagaggaagataatgacgagccgttactcagcgggtcgggt
gacgtttccaaggagtgtgcagagaaaatccttgagacctggggtgacttgttatccaag
tggcacttgaacttatcggtgcgacccaggcagctgccggctttggttcggagtggcatc
ccagaggctctgcgcggggaggtgtggcagctcctggccggctgccacaacaacgaccac
caggtagaagagtaccgcactctgatcacaaaggagtctcctcaagacagtgccattacc
agggacattaacaggacattcccggctcatgactacttcaaagacaccggaggagatgga
caggactccctgtacaagatctgcaaggcctactctgtttacgatgaggagatcggctac
tgccagggacagtccttcttggccgctgtgctgctgctgcacatgccagaggagcaagct
ttcagtgtgctcgtcaagatcatgtttgattacgggctcagggacctcttcaagcagaac
tttgaagatctgcattgcaagttcttccagctcgagaggctcatgcaggaatatatacca
gacctgtacaaccatttcctgaacgtgggtttggaggctcatatgtatgcctctcagtgg
ttcctcacgctcttcacagccaagttccctctgtacatggtcttccatatcatcgacctg
ctactgtgtgagggcattagtgtgatcttcaatgtggccttggcgttactaaagacatcg
aaggacgatctgatccacacagacttcgagggtgcactcaaattctttcgtgtcccggtc
ccaaagaggtaccgatctgaggagaacgcaaagaagctgatggagctggcttgtagtatt
aagatcagccagaaaaagttgaagaaatttgagaaggagtaccacaccttgagggagcag
caggagcaacaagaggcccccatcgagagatatgagcgggagaaccgtcgcttgcaagac
gccaacatgcgcttggagcaggaaaacgacgacctggctcacgagcttgtcagcagcaag
atagccctgcgcagagacctcgacaacgctgaggagaaggcagacgccctgaataaagag
ttgctgctgaccaaacagaaactggtggactctgaggacgagaagagacgcctggaagaa
gaatctgcacagctcaaagagatgtgcagaagggagctcgataagtccgaatcggagata
aagaagaacggctcgattattggagaatacaagcagatctgctcccagctgagtgaacga
ctggagaaacaacagactgccaaccgaggagaacttgagaaaatccggtccaaagtggat
ggctgtgagaggtgcagcagccttttcaacaaagaaggtcgggtgcgggctgctgtgacc
cgggccacagctggaggggccgaggaggccgatgaggagaaggaggatttgaagaaccag
ctgagagagatggagctggaactggctcagaccaaactgcagctggttgaggcggagtgc
aaaatccaggacctggagcaccacctggggctggccttcaacgaagtgcaggccgccaag
aagacctggttcaaccgcacgctcagctccatcaagaccgccacaggggcccagggcaag
gagactacctaa
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