Pungitius pungitius (ninespine stickleback): 119226595
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Entry
119226595 CDS
T07626
Symbol
tsc1b
Name
(RefSeq) TSC complex subunit 1b isoform X1
KO
K07206
tuberous sclerosis 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04140
Autophagy - animal
ppug04150
mTOR signaling pathway
ppug04218
Cellular senescence
ppug04910
Insulin signaling pathway
ppug05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
119226595 (tsc1b)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119226595 (tsc1b)
09143 Cell growth and death
04218 Cellular senescence
119226595 (tsc1b)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
119226595 (tsc1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119226595 (tsc1b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Hamartin
DUF7310
Trimer_CC
Motif
Other DBs
NCBI-GeneID:
119226595
NCBI-ProteinID:
XP_037340612
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All DBs
Position
18:12274046..12292051
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AA seq
1283 aa
AA seq
DB search
MAREQPNVGELLPLLETSELPQLDEIRGLINEQLNTERGSMLLNGLVDYFLETNSVPAVH
ILSSVREPHDKHLLDKMNECMTKQACRLPTLTLLGHVIRKQPSWIHKMARYPLLLSLLKC
LKTDTDVVVLITGVLVLIALLPMIPQAGKQHLWEYFDIFGRLASWNLKNPGHVSEVYLIH
LHASVYSLFHRLYGMYPCNFVSYLRSHYSMKENMETFEEVVKPMLEHVRIHPELVTGTKD
HELDPTRWKKYEIHDIVIECAKVSLDPKEASCEEGYANMPENFYPQVHLRPLDCTSSPYA
DLHSSFGSSSSTPFSTPRQPLPPPLSLPPFSGTHSSPRSPPISRRQNSTCELDSSCGVKD
PLWSPSSLCGMATPPSSRGMSPNVELSHSASHLPGRFHCTSGGKGTPASSTPATSSPPPT
LSDDFPIISLPANTVQSSPPRKDRRHGESKPALVRQEPVRDIDKSADVSTNRAGAGAAEN
LSMTLPELSAFMKKQELELQLRTEKEREEAAITEELQKITEDTQEPPGRRSLDSPFHLTT
ETLTGCQAQDKTSSSSSSQPGGAAVHTRHVASSPDKGETTASTSGGGSERGGGGGEGGGA
GDSRSSAIGLEQSWSSQSGFTPIEHHLHRSPSAPEDDLAKFGMFSPSPCGKMPAPYESFF
DLALPRAASLFVGQRTSEAVHKAAQERLLQREEGLEDGEEEGVATASPLEVLDRLVQQGS
DTHNKVLERLPLPSKSADWTHFGGSAPLDELHTLRSQLLLTHNQLLYERYKREQHAVRNR
RLLRRIINATALEEQNNAMKDQLNLQSVDIVSLRESLQVEQQRYRQLWDDRETVVTRLHS
QIRQLQQGRDDYYTKNQELQSKLQECQKRIDELEAELQRANNKVCHTGHLLSQMTIKLSN
SESTQQQMSFLNKQLLLLGESHKLSMQGLPHAATDTTKEALMLKASYGKEVEALRQSLLF
QGQKLEAAQQRVGELETHQSKKEHLIAEQKKFLEDVKCQAKSELQSSDVRYQAQRRITQL
LQTELLQLYSRVETEAPAGTASGSPTGGRTGSHLCAETSVMAPDGQLHTNEEVGSRPLRN
SPRGNSSSTLSPQQPKASNSSKTTGTSLNGSQDLIEPSLSGLYANPLAPLPPSDAPLTVG
SYPSAKSFLGMRARELFRNKSESQCCDDDDEEEQKHQQQQQPPPPPALPPGLAQGLKTEL
CVEPPTPGCVGPATPPVPVPALAAPLTVPTKEPPVETEQRASSQESPRRKAGSGGGRGQT
GSGRPRQQQLNIMDYNETHHEHS
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atggccagggagcagccaaacgtgggggagctcctcccactcctcgagacctccgagctc
ccccagctagatgagatcaggggcctcatcaacgagcagctcaacactgagcgagggtcc
atgctgctgaatggactggtggactacttcttggaaacaaactccgtgccggccgtgcat
atcctctcctccgtcagagagccccacgataagcaccttctggacaagatgaatgagtgc
atgaccaaacaggcctgccgtctgcccaccctcaccctgctcggccatgtcatccgcaag
cagccgtcctggatccacaagatggctcggtaccctctgctgctgtcgctcctcaaatgc
ctcaagacggacacggacgtagtggtgctgataaccggcgtgctggtgctcatcgctctg
ctacccatgatacctcaagccgggaagcagcacctgtgggagtactttgacatcttcggc
cggctggcgtcttggaaccttaagaatccggggcacgtttcggaggtttacctaatccac
ctgcacgccagcgtctactcactcttccaccgtctctacggcatgtacccttgcaacttt
gtgtcctacctgcgctcccattacagcatgaaggagaacatggaaacttttgaggaggta
gtgaagccgatgcttgaacacgtccgtattcacccagaactggtgacgggaaccaaggac
cacgagctcgaccccaccaggtggaaaaagtacgaaatccacgatatcgtcatcgaatgt
gccaaagtgtctcttgaccccaaggaggcctcctgcgaggaaggctacgccaacatgcct
gagaacttctacccccaagtccacctgcgaccactagactgcacttccagtccctacgca
gacctccacagcagcttcggaagctcttcttcgaccccgttctcgactccacggcagccg
ctgcccccccctctgtccttgccccccttctcagggacgcactcctccccccgcagccca
cccatctccagacggcagaactccacctgtgaactcgactcctcttgcggggtgaaggac
cctctgtggagcccctcctccttgtgtggcatggccacgcccccttcctccagaggcatg
tcgcccaacgtggagctctcccatagtgcctctcaccttcccggccgcttccactgcaca
tcaggaggaaaaggaacgcccgcctccagcactccggccacctcctccccacctcccacc
ctatcggatgacttccccataatctccttaccagccaacacagtccagtccagtccacca
agaaaggatcggcgacatggagaaagtaagccggctctggtcagacaggaaccagtgaga
gatatagacaagagtgcggacgtgtccacaaacagagcaggagcaggagctgcggagaac
ctctccatgactttgccggagctgtcggccttcatgaagaaacaagagctggagcttcag
ctgagaacggagaaggagagggaagaggcggccatcacggaggagctgcagaagatcacc
gaggacacgcaggagccgccgggtcgcaggagtttggactccccgttccatctcaccacg
gagactctgaccggctgtcaggcacaagacaaaacctcctcctcctcctcctcccagccc
ggaggcgccgccgtgcacacccgccatgtggcatcgtcgccggacaaaggggagaccacc
gcgagtaccagtggcggcgggagtgaaagaggaggaggaggaggtgaagggggcggagca
ggggacagcaggagctcagccatcggcctcgagcagtcctggtcctcccagtcggggttc
acgcccatcgagcaccacctgcaccggagcccctccgccccggaagacgacctggccaag
tttgggatgttctccccgagcccgtgcgggaagatgccggcgccctacgagtcgttcttc
gacctggccctgcctcgggcggcctcgctcttcgtgggccagaggacgtcggaggcggtg
cacaaggcggcgcaggagaggctgttgcagcgggaggagggactggaggacggcgaggag
gaaggggtagcgaccgcttcgccgctggaggtgctggatcgccttgttcagcaggggagc
gacacccataataaagttctagagagattacctttgccaagtaagtcagctgactggacg
cactttggaggctcggctccgctggacgagctccacacgctgcgcagccagctgctcctg
acgcacaaccagctgctgtacgagcgctacaagagggagcagcacgccgtccgcaaccgc
cgcctcctccgacgcatcatcaacgccaccgcgctggaggagcagaacaacgccatgaag
gaccagctgaacctgcagagcgtggacatcgtgtctctgagggagagtctgcaggtggag
cagcagcggtacaggcagttgtgggatgaccgggagactgtggtgaccaggctgcacagt
cagatcagacagctgcagcagggccgggacgactactacaccaagaaccaggagctccag
agcaagttgcaggaatgtcagaagaggatagacgagctggaggcggagcttcagagggcc
aacaacaaagtgtgccacacaggtcacctcctcagccagatgacaatcaagctgagcaac
agcgagagcacccagcagcagatgagcttcctaaacaagcagctgctgctcctcggggag
tcgcataagctgtccatgcaggggctaccacacgcagccaccgacactaccaaggaggcc
ctgatgctgaaggcgtcttacgggaaagaagtggaggcgctgaggcagagtctgctgttt
cagggtcagaagctggaggcagcccagcagagagtcggcgagctggagacgcaccagtcc
aagaaggagcacctcatcgccgagcagaagaagttcctcgaggacgtcaagtgtcaggct
aagtcggagctgcagtcctcagacgtcaggtatcaggctcagaggagaatcacccagctg
ctgcagactgaactcctgcagctctacagcagagtggagacggaggctccggctggcacc
gccagcggttcgccaacagggggcagaactggctcacatctttgtgctgaaaccagtgtc
atggcacccgacggacagcttcacaccaacgaagaagtgggcagtagaccattgcgcaat
tcccctcggggcaacagcagcagcactttatcgccacagcaaccaaaggcgagcaactct
tccaagacgacaggcacctccctcaacggcagccaggacttgattgaaccctccctgtcg
ggtctgtacgccaacccgctcgcgcccttgcctccctcggatgcgccgctcaccgtgggc
tcctaccccagcgccaagagcttcctgggcatgagggcccgcgagctgttccgcaacaag
agcgagagccagtgttgtgatgatgatgatgaggaggagcagaaacatcagcagcagcag
cagccaccgcccccccctgctctcccacctggcctcgcccaaggcctcaagactgagttg
tgcgtagagccccctactccaggttgcgtcggcccggcaacccctcccgtcccggtccct
gccctcgccgctcctctcacagtgcccaccaaggagcctcccgtcgagaccgagcagcgg
gcctctagccaggaaagcccccgccggaaggcggggtcagggggtgggcggggtcagacg
ggctcagggcgcccccgtcagcagcagctaaacatcatggactacaacgaaacacatcac
gagcacagttag
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integrated database retrieval system
