KEGG   Pungitius pungitius (ninespine stickleback): 119226691
Entry
119226691         CDS       T07626                                 
Symbol
wdr41
Name
(RefSeq) WD repeat-containing protein 41
  KO
K23610  WD repeat-containing protein 41
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Pathway
ppug04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    119226691 (wdr41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ppug04131]
    119226691 (wdr41)
Membrane trafficking [BR:ppug04131]
 Autophagy
  Other autophagy associated proteins
   Rab associated proteins
    119226691 (wdr41)
SSDB
Motif
Pfam: Beta-prop_WDR41 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40 Beta-prop_TEP1_2nd Beta-prop_WDR5 Beta-prop_WDR36-Utp21_1st Beta-prop_THOC3 WD40_Prp19 WDR55 Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_TEP1_C EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML ASA1 Beta-prop_SCAP WD40_Gbeta Beta-prop_IP5PC_F WDR90_beta-prop_4th DSE1_N Beta-prop_EIPR1 Beta-prop_WDR36-Utp21_2nd PAC11 Beta-prop_DCAF12 SHKBP1_KCTD3_C WD_LRWD1
Other DBs
NCBI-GeneID: 119226691
NCBI-ProteinID: XP_037340796
LinkDB
Position
18:complement(1785419..1791840)
AA seq 450 aa
MLRWILGGREAQGSVEKGPVLCIGEEQPKNWFTELQVLKGHFDIVRFLVQIDDFRCASAG
DDGLVLVWNVETGEKLQELRGHSQQITAMTTLTCNKGGTSHTSLITASSDRSLSLWDPDT
GNRVQTISDLQSSVKCLLVLERLCVWLSGAEELCVWNEDFQLQCQSQNHSDTGITALIEL
PKNCVAAAVDKEIVVFRLTVSTDSSMSVAEVRRLSDHQDRIRALINVNDGLFASGSHAGE
LILWDAVDWNIHGYEHILWEEPQAGAQPEIRLAAHKPSEMSIQHLTTDGRHILAAVGSGL
YVYSVLTKTVAAYRKCAHDSNVLHTMLASDSQLMSCSEDGSLRMWEIQDLPLPGEPASSG
FFGMWTFGRSNKPSGAAPKKAAEAPSIRTLELTGDLIGHSGAVQMFVSFGEKGLVTCSTD
HLLILWRNGERQSGLRSRALFRRLEESGGL
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgcttcgctggattcttggtggtcgagaagcgcagggttcggtggagaaaggccccgtg
ttgtgcatcggagaggaacagcccaaaaactggttcactgagctgcaggtgctgaaagga
cattttgacattgttcgatttctggtgcagattgatgacttcagatgtgcctctgcaggc
gatgatggccttgttttggtgtggaacgtcgagaccggggagaagctgcaggagctgcgg
ggccattcccagcaaatcacagccatgaccaccctcacctgcaacaagggaggcacgtcg
cacacctcgctcatcacggcctcgtcggaccgaagtctcagtctgtgggaccctgataca
ggcaacagggttcagactatttcagatctgcagtcttctgtgaagtgtttgctggtgctg
gagcggctgtgtgtgtggctctccggcgccgaggagctgtgtgtgtggaacgaggacttc
cagctgcagtgtcagagccagaaccacagcgacaccggaatcacggctttgatagagctg
cccaagaactgcgtagcagctgctgtggacaaagagatcgtggtcttcaggctgacggtg
tccactgattcctccatgtcggtggccgaggtgcggcgcctgtccgaccaccaggaccgc
atccgagctctcatcaacgtcaacgacgggctcttcgccagcggctcccacgccggcgag
ttgatcctgtgggacgcggttgattggaacatccacggctacgagcacatcctgtgggag
gagccacaagccggcgctcagcccgaaatacgattggctgctcacaaacccagtgagatg
tcaatccagcatctgaccaccgacggcaggcacatcctggcggcggtgggcagcggcctg
tacgtgtacagcgttctcaccaagacggtggcggcctacaggaagtgcgcccacgactcc
aatgtcttacacaccatgctggcgtcggacagccagctgatgtcatgctctgaggacggc
agcctgaggatgtgggagatccaggacctgcctttacccggtgaaccggcctcctcaggg
ttctttggtatgtggaccttcggccgctcgaacaaaccgagcggcgcggcgcccaagaag
gcggcggaggccccgagcatcaggacgctggagctgacgggggatctgatcggacactcg
ggggcggtccagatgttcgtgagcttcggggagaagggcctggtcacctgctccacggac
cacctgctgatcctgtggaggaacggggagaggcagtcgggcctgcgcagccgcgccctg
ttccgcaggctggaggagagcggaggactctga

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