KEGG   Pungitius pungitius (ninespine stickleback): 119226744
Entry
119226744         CDS       T07626                                 
Symbol
helq
Name
(RefSeq) helicase POLQ-like isoform X1
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppug03400]
    119226744 (helq)
Enzymes [BR:ppug01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     119226744 (helq)
DNA repair and recombination proteins [BR:ppug03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    119226744 (helq)
SSDB
Motif
Pfam: POLQ_helical DEAD HTH_61 Helicase_C ResIII HHH_5 DNA_pol_lambd_f DUF7898 DUF4332
Other DBs
NCBI-GeneID: 119226744
NCBI-ProteinID: XP_037340893
LinkDB
Position
18:complement(193535..202680)
AA seq 973 aa
MHAAGKHGIQIKRVSSRKRSRDRNTHLTPVGKRGGATCAQPCPRAGGLGSIMAAEFCSDS
EDLFGDYDSLLEDSSLLEKLDHAEQLEFTALRHKEPGEDVLTDSILDVLGDEDLPTSQRL
FEEQVDRPPKRSRPQDGDAASSPLRDAGDTRKRRSVADRMKRAMLCNAAAPSSVSRGATM
KEAVVSEEISIAMRAMDSVCAETPDLGPFFGLPSRVKELMFKLRGIQGLYDWQQTCLNLD
CVQQRKNLIYSLPTSGGKTLVAEILVLRELLCRRKDCLFILPYISLVQEKVRGLASFGLE
LDFLVEEYAGSKGRFPPVKRRNNRSVYIATIEKAHSLVNSLIESGRVEDLGLVVVDELHM
LGDGSRGAIIEMTLAKVLFTSKSTQIIGMSATLGNIKDLQTFLRAENYTNDFRPVQLKEY
VKLTDTIYEVDPTQEECFQFSRLLNFKYSSSMQKVDPDHIIALVTEVIPAHSCLVFCPTK
KNCENVVGMICKYLKKEFLALRQQEKAVLLGELRASGSGSACPVLRRTVPYGLAYHHSGL
TSEERKLVEEAYSNGVLCLLTCTSTLAAGVNLPARRVILRSPYVASDFLKRSQYKQMVGR
AGRAGIDAVGESVLILQDADRDAARTLVLAPMEKCYSNLLRDGGRGLLSLILSLIGLNIS
SSVGCVMDFLCVTLLCVQQEALCAETSLKEEVQRCVDLLKDKDLVTETAQGQTLQVTKLG
RATFKGSVDLTYSDLLYKDLSKGLEGLLLNSCLHLVYLVTPYDMITQCRPDWMVFFRQFT
LLTDAEQKMSAAVGVPESFIARKAAGQTVRKPVSMEVVSRMYLALVLFSLLKETNLWSVS
ERFHLSRGFVQSLLGSSSAFCSCVLHFTEELEEFWPFRALLTELTRRLSYCVTAELIPLM
EVAGVMESRAKQLYNAGYRTLSQLANADPALLSTTIENLFPKRANQIVASAKMLLNEKAA
ALQEEVDELLMKP
NT seq 2922 nt   +upstreamnt  +downstreamnt
atgcacgctgctgggaaacacggaatccaaatcaagagagtatcctcgagaaagcgctcc
agggaccggaacactcacctgacacctgtggggaagaggggcggagctacctgcgcacag
ccatgccccagagccggggggctcggaagcatcatggctgctgagttctgcagtgacagt
gaggacttgtttggggactacgacagcctcctggaggacagctctctgctggagaagctg
gaccatgcggagcagttggagttcaccgccctgagacacaaggagccgggcgaagacgtc
ctcacggactccatcctggacgtcctcggggatgaagacttaccgaccagccagcggctg
tttgaggagcaagtcgacaggcccccgaagaggagtcgcccgcaggacggagacgcagcc
tcgtctcctctcagagacgctggggacacgaggaagaggaggagcgtggccgatcggatg
aagagggccatgctctgcaacgcagcggctccctccagcgtgtcacgcggcgccaccatg
aaggaagcggtggtctctgaggagatcagcatcgccatgcgggccatggactccgtctgt
gccgagacccccgacctcgggcccttcttcgggctccccagcagggtgaaggagctcatg
ttcaaactgagaggaatccagggtttatacgactggcagcagacgtgtctgaacctggac
tgcgtgcagcagaggaagaacctcatctactcgctgcccaccagtggggggaagacgctg
gtggcagagatcctggtcctcagagagctgctgtgcaggaggaaggactgcctcttcatc
ctcccgtacatatcgttggtgcaggagaaggtacgtgggttggcgagcttcggcctggag
ctggacttcctggtggaggagtacgcaggcagcaaagggaggttccctcccgtgaagagg
aggaacaacagatccgtgtacattgccacgatagaaaaggcccacagcctcgtcaactcc
ctgatcgagagcggcagggtggaggacctcggcctggtggtggtggacgagctccacatg
ctgggagacggcagcagaggagcaatcattgaaatgactttggccaaagtcctcttcaca
agcaagagcactcagatcatcgggatgagcgccaccttggggaacatcaaagacctgcag
acgttcctgagggcggagaactacaccaacgacttcaggcctgtgcagctgaaggagtac
gtgaagctgacagacaccatctacgaggtcgacccaacgcaagaggaatgttttcaattc
tcacgtcttctcaactttaagtactccagctccatgcagaaggtggatccggatcacatc
attgctctggtgactgaagtcattccagcacattcctgcctggttttctgccccaccaag
aagaactgtgagaacgtggtggggatgatctgcaagtacctcaagaaggagttcctggcg
ctccggcagcaggagaaggccgtcctcctcggggagctgcgggcgagcggcagcgggtcg
gcgtgtccggtgctgcggaggacggtgccgtacggtctggcctatcaccacagcgggctg
acgtctgaggagaggaagctggtggaggaggcctactccaacggggtgctgtgcctcctc
acctgcacctccacgctggccgcaggggtcaaccttccagcccgcagggtgatcctccgc
tcgccctacgtggcctcagacttcctgaagaggagccagtacaaacagatggtgggccga
gccggtcgggccgggatcgacgccgtgggagagagcgtcctcatcctgcaggacgccgac
agagacgcggccagaaccctcgtccttgctcccatggagaagtgctacagcaacctgctg
cgtgatggagggaggggcctcctgagcctcatcctgtcactcatcggactcaacatcagc
tcgtcggtgggttgcgtgatggacttcctgtgcgtgacgctgctgtgcgtccagcaggag
gcgctgtgtgcggagaccagcctgaaggaggaggtgcagcggtgcgtcgacctcctgaag
gacaaagatcttgtcacggagacggctcaaggtcagacgctgcaggtcaccaaactggga
cgagcaaccttcaaaggctctgtggacctgacctacagtgacctcctctacaaagacctc
tccaaaggcctggagggtcttctgctcaacagctgcctccacctggtctacctggtcacc
ccgtacgacatgatcacacagtgcaggcccgactggatggtgttcttcagacagttcacg
ttgctgacggatgcggagcagaagatgtctgcagccgtcggagttccagagagcttcatc
gccagaaaagcggcaggacagacagtgagaaagcctgtcagcatggaggtggtgagcagg
atgtatctggctctggtcctcttctctctgctgaaggagaccaacttgtggagcgtctcc
gagcggttccacctgagccgaggcttcgtccagagtttactgggctcctcttcggctttc
tgctcgtgcgtgctgcacttcaccgaggagctggaggagttctggccgttcagggctctg
ctgacggagctgacccggaggctcagctactgtgtgacggctgagctcatcccgctgatg
gaggtggccggagtgatggagtccagagcgaagcagctctacaacgccggctaccgaacg
ctgagccagctcgccaacgccgacccggcgctgctctccaccacgatagaaaacctcttc
cccaaacgagccaatcagatcgtagcctccgccaagatgttgctgaatgagaaagctgca
gctcttcaggaagaagttgacgagttgctgatgaagccgtaa

DBGET integrated database retrieval system