Pungitius pungitius (ninespine stickleback): 119226772
Help
Entry
119226772 CDS
T07626
Symbol
itga1
Name
(RefSeq) integrin alpha-1 isoform X1
KO
K06480
integrin alpha 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04510
Focal adhesion
ppug04512
ECM-receptor interaction
ppug04810
Regulation of actin cytoskeleton
ppug04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119226772 (itga1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119226772 (itga1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119226772 (itga1)
04810 Regulation of actin cytoskeleton
119226772 (itga1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppug04147
]
119226772 (itga1)
04515 Cell adhesion molecules [BR:
ppug04515
]
119226772 (itga1)
04090 CD molecules [BR:
ppug04090
]
119226772 (itga1)
Exosome [BR:
ppug04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119226772 (itga1)
Cell adhesion molecules [BR:
ppug04515
]
Integrins
Integrin alpha subunits
119226772 (itga1)
CD molecules [BR:
ppug04090
]
Proteins
119226772 (itga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
Integrin_A_Ig_1
VWA_2
FG-GAP_3
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
119226772
NCBI-ProteinID:
XP_037340936
LinkDB
All DBs
Position
18:complement(4011767..4039425)
Genome browser
AA seq
1183 aa
AA seq
DB search
MLGIRDFTLTAVVAVLLLLPCVLSFNVDQKNGLSFEGPLEDMFGYTVQQFENSEGKWVLI
GSPLSGQPAKRTGDVYKCPVGTGNNTCVKLELPKNTTVPNLHEVKENMTMGTTLVTNPNG
GFLACGPQYGYMCGQQQYISGVCANVSDSFQVLNSVAPAVQECAKELDIVLLLDGSNSIY
PWSSIVDFLQRFITNIQIGPRLSQVGIVSYGENVTHRVNLNQFNNTRDLLNFVKSLPQQT
GYKTMTFLGIDTARKEAFVPERGARPGVKKVMVIVTDGESHDSHNLDEVIGDCEVDGIER
FGIAVLGAYNRQNKSSAEIQKFIKEIESISSEPLQDHFFNVDDEVALLSIVDALGSKIFA
LEATTGNFTSSFEMEMSQAGFSAHASKEGLLLGAVGAYDWNGTVIMHTAGATIVPGKTEF
YDPETEAGYEGLAGYLGYDVQSASTAGGVLYISGAPRYNHTGRVVVYRLDANNSVVVSQI
LKGQQIGSYFGSVLQTVDVDGDSSTDLLLVGAPMYMGTEKDEQGQVYVYELDQAGQFHHK
FTLKPVNQSCCAARSASCTNKNEPCGARFGTAIAAVSDLNLDGFNDVAIGAPLENDHRGA
VYIYHGEKKSLKEKFVQHIPAGGDGEKMKFFGQSIHGVMDLNGDGITDVTIGGLGGASLF
WSRDVAALRANMTFDPVKINLQQTQCDHAGRKSVCVETEVCFHYSVKSDNGDESAAADIR
YNLTLDALRAKARASFKAPEDKGDRRITRSLTIKDRERKCVQETFVMSARLDFREPLMVS
LEFGLADADKGPVLDESLPKSINETIPLVDCGIDERCIADLSLKAEPSVKRMLIRGNKDN
IVVNVNIRNSKDNAYNTKVTLSFTPHINYAKVEPEKACTLNNTKVECAVGYPFLGSNVEE
NFQVRFDVNPNHIQEVIQINVTATSDSEELSSTQHDNAVHISIPVKYEAGLIFSVRPADE
HVVIKEGERYPAEFNDTSAIGEELNVSYTLEKSSDRASPPVSLTVTYPHLSPRQNRLLYL
TRVAASPHVKCDAARFINPLNINPKVIETNPKKETLSVFLLSCENLYCESFVCSVPEATS
SQVNLTFRLWKPTFIKGEFSNLHMLVNATLQLESSSLFELTRDRSRVAKIQVSKETLGGI
PIWIIIISILIGLLILALVIFALWKMGFFKRKSRDYSKEEMMD
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgctggggataagagacttcactttgacagcagtcgttgcagtgctgctgctgctgccg
tgtgtgctgtccttcaacgtggaccagaagaacgggctgtccttcgagggcccgctggag
gacatgttcggctacacggtgcagcagttcgagaacagcgaggggaaatgggttctgatt
ggatcgccgctgtcgggccagccggccaaacggacgggagacgtgtacaagtgtcccgtg
gggacggggaacaacacgtgtgtcaagctggagctgcccaaaaacacaacggttcccaac
ttacatgaagtcaaggagaacatgaccatgggaaccacgctggtgaccaatcccaacgga
ggatttctggcctgcggtcctcagtacggctacatgtgcggccagcagcagtacatctca
ggggtttgtgccaatgtcagcgactccttccaggtcctcaactccgtggcgccggccgtg
caagagtgtgcgaaggaactggacattgtgctccttctggatggatccaacagcatctac
ccttggtccagtatcgtcgactttctgcaacgtttcatcacgaacattcagatcggaccg
aggctctcacaggtggggatagtgtcctatggcgagaatgtgactcaccgtgtcaacctg
aaccagttcaacaacacccgtgatctgctgaactttgtaaaaagcctccctcagcagacc
ggctacaagaccatgactttcctgggcatcgataccgccaggaaagaggccttcgtgccg
gagcgcggcgctcgccccggggtgaagaaagtcatggtgattgtgactgacggagagtca
catgactctcacaatctggacgaggtcatcggagactgtgaggttgatggcatcgagagg
ttcggcatcgctgttttaggagcctacaatcgtcagaataaaagctcggcagaaatacag
aagtttattaaggagatcgagtccatttccagtgagccgttgcaggaccacttcttcaac
gtggacgacgaggtggcgctgctgagcatcgtggatgctttgggaagcaagatttttgct
ttggaagcgacaaccggcaatttcacctcttcctttgagatggagatgtcccaagctggc
ttcagtgcacacgcttccaaagaaggcctgttactgggagcagtgggagcgtatgactgg
aacgggacagtgatcatgcacactgccggagcaaccattgttccggggaagaccgagttc
tacgacccggagactgaggccgggtacgaaggcctcgccgggtacctcggctatgacgtt
cagtcagcctccaccgcgggtggagttctgtacatctcaggtgcaccgcggtacaaccac
acaggccgggtggtcgtctatcgcctggacgcaaacaacagcgtcgtcgtctcccagata
ctgaaaggacaacagattggttcctacttcggcagcgtcctgcagaccgtcgacgtggat
ggagactcctccacggatctcctcctggtcggagctcccatgtacatgggcacggaaaaa
gacgagcagggacaagtctacgtctacgaactcgaccaggccggccagtttcaccacaag
ttcaccttaaagcctgtcaatcagtcctgctgcgctgcccgctcggccagctgcaccaac
aagaacgaaccgtgcggggcccgcttcggtacggccatcgccgcggtgtcggacctcaac
ctcgacgggttcaacgacgtggccatcggcgcgccgctggagaacgaccaccgcggggcc
gtctacatctaccacggcgagaagaagtcactgaaagagaaatttgtgcagcacatccct
gcaggtggggacggtgaaaagatgaaattctttggccagtccatacatggagtcatggat
ctaaacggagatggaatcacagatgttaccataggaggtctgggaggggcttcgctgttc
tggtccagagacgtggcggcgctccgtgccaacatgaccttcgaccccgtcaaaatcaac
ctgcagcagacccagtgtgaccacgccggacgcaaatccgtgtgcgtggaaacggaggtg
tgtttccactacagcgtcaaatccgacaacggggacgaaagcgctgccgccgacatccgc
tacaacctcaccctggatgcgctgcgtgccaaagccagggcttcattcaaggcccccgag
gacaaaggcgaccgcaggatcaccaggagcctcaccatcaaagaccgagagaggaagtgt
gtgcaagaaaccttcgtgatgtcggcccggctggacttcagagagcctctcatggtgtct
ctggagtttggactagccgatgcagacaaaggccccgtcctggatgaaagccttcccaaa
tccatcaatgagacgattccgctggtggactgtggaatcgatgagaggtgcatcgctgac
ctctctctcaaagcagagcccagtgtcaaaagaatgttgatcagaggcaacaaagacaat
atcgtcgtgaacgtgaacatcaggaacagcaaagacaacgcgtacaacacgaaggtcacc
ctcagcttcacgccgcacatcaactacgccaaagtagagccggagaaggcctgcactctg
aataacacaaaagtggagtgtgctgttggataccccttcctggggagtaatgtggaggaa
aatttccaagtgcggtttgatgtaaatcccaatcacatccaggaggttattcagattaat
gtgacggctacgagtgacagcgaagagctgagctcgacccagcacgacaacgcggtgcac
atctccatccccgtgaagtacgaggccggactgatcttctcagtgcggcccgcggatgaa
cacgtcgtaataaaagagggcgagcggtacccggctgagttcaacgacaccagcgcgatc
ggggaggagctcaacgtcagctacacgttggagaagtcgtccgatcgggcgtctcccccc
gtcagcctcactgtgacgtaccctcacctgtccccccggcagaaccgcttgctgtacctg
acgcgcgtcgccgccagcccgcacgtgaaatgtgacgcggcgcgtttcatcaaccccctc
aatatcaacccgaaggttatcgaaacaaatccaaagaaagagactctgagtgtcttcctg
ctgagctgtgagaacctctactgcgagtcgttcgtctgctccgtccccgaggcgaccagc
agccaggtcaacctcaccttcaggttgtggaaacccacgtttatcaagggcgagttctcc
aacctgcacatgctggtcaacgccacgctgcagctcgaaagcagcagcctgtttgaactg
accagggaccggagccgggtagcgaagatccaggtttcgaaggagaccttaggaggaatc
cccatttggatcatcatcatcagcatcctcataggactgctgatcttagcgctcgtcatc
ttcgctctctggaagatgggcttcttcaagaggaaatccagggactactcaaaggaggaa
atgatggactga
DBGET
integrated database retrieval system
