Pungitius pungitius (ninespine stickleback): 119226810
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Entry
119226810 CDS
T07626
Symbol
sema6dl
Name
(RefSeq) LOW QUALITY PROTEIN: sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like
KO
K06842
semaphorin 6
Organism
ppug
Pungitius pungitius (ninespine stickleback)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
119226810
NCBI-ProteinID:
XP_062417821
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Position
4:20624710..20638687
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AA seq
1115 aa
AA seq
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MGQRAVLLLSELLLLLTASRTLLAVSFPEDAAPLDVVDAHFARRYPVFRGRPSGNESQHR
LDFQLMTKIQDTLFIAGRDQVYLVSLRESYRNEIIPYRKLTWRSGQSDRDTCAVKGKHRE
ECHNFIKVLVPRNDDLVFICGTNGFNPMCRYYRLDNLEFDGEEINGLARCPFDSKQTNVA
LFAEGKLYSATVADFQASDAVIYRSMGDGSALRTIKYDSKWLKEPHFLHAAEYGNYVYFF
YREIAVEHSNLGKVVYSRVARICKNDVGGSQRVLEKHWTSFAKARLNCSVPGESFFYFDV
LQSITDIISINGVLSVVGVFTTQMNSIPGSAVCAFSMADIEAVFLGRFKEQKTPDSVWTP
FPEEKLPKPRPGSCAGHGPAASLKSSIEFPDDTLQFIKSHPLMDTAVPSIGDEPWFTKTR
VRYRLTALAVDNEAGPHKNFTVVFIGAESGVVLKVLAKTSAVSLNDSVLLEEIDVFNRAK
CLSNHEDDKRVLSLHVDKEAHSLYVAFSSCVIRIPLSRCERHSSCHKSCIASRDPYCGWM
THGVCERIQPGVLTGYEQDVELGSTAHLGDCHAFLGSTSAPDYKSFGDPTSDMEFSTTPV
TAHPSGPIHPPVLIPTQSPSSGPGPELYGSDLVPQDDPAISNSLDSIPRGHEGVWDIQAG
ETNQMVHMNILITCVFAAFLMGALLAGLIVFCYRDSFLRKPRRVHKDAECAPSCSDSTGS
FVKLNGLFDSPVKEYQTNIDSPKLYTNLLSNGKDLNSPNGDTKTMILRDGCQPPELAALP
TPESTPVLQQKSLQPIKNQWERAHAKASGPRKEPNSSAMSPQFLLSSAGAPPNSTTLTNS
NHPHPALGHSHIPSAVVLPNATHDHSNLESGEDTLPHSSERKLRNPDSKGCRKEQKRSVD
ARNTLNDLLKHLNDSVANPKAILPEGSGPRPRPQLTLEPMEELTELPPRVPSREASLYSP
SSSLPRNSPTKRVDVPLPTTPTTPTGSLSMGGTLERQRGGYQLHRSASHRHSLSTSPNGV
TMGVSVSRQHSMNRGGYMPPTPPSRLDSQGGGGTGTGMHSAHQSAVPRQGSYSGYGSLPR
TGLKRTPSLKPDVPPKPNGFSPQTPQMRVVNKYSY
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgggccagagagctgtgcttctgctcagcgagctgctgctgctgctgacagcctcacgc
actctcctcgccgtcagcttccccgaggacgccgcgcccctcgacgtggtcgacgcgcac
tttgcacggagataccccgtgttcagaggccggccctctggcaacgaatcccagcatcgc
ctggacttccagctgatgacaaagatacaggacactctgttcatcgctggcagagatcag
gtgtacctggtcagcctgagagaatcctacaggaacgagatcattccttaccggaagctc
acgtggcgatcgggccaatcggacagagacacgtgtgccgtcaaggggaaacacagagaa
gagtgccacaacttcatcaaggtgctggttcccagaaacgacgacctggtgttcatctgc
ggcaccaacggcttcaaccccatgtgcagatactacaggctggataaccttgagttcgac
ggcgaggagatcaatggactggcgcggtgcccgttcgactccaagcagaccaacgtcgcc
ctcttcgccgaggggaagctgtattctgcgactgtggccgacttccaggccagtgatgcc
gtcatctatcgcagcatgggcgatgggtcggcgctcaggaccatcaaatacgactccaaa
tggctgaaagaaccgcatttcctgcacgcagcagagtacgggaattatgtgtacttcttc
taccgggagattgcggtggagcacagcaatctgggcaaggtcgtgtactcccgcgtcgcc
cggatctgtaagaacgacgtgggcgggtcgcagcgggtcctggagaagcactggacgtct
ttcgccaaggcgaggctgaactgctcggtgccgggggagtccttcttctactttgacgtg
cttcagtccatcactgacatcatcagcatcaacggggtcctctcggtggttggtgtgttc
accacccagatgaacagtatcccggggtcggcagtgtgcgctttctccatggccgacatt
gaggccgtgttcttggggcggttcaaagagcagaagactcctgactctgtgtggactccg
tttccagaggagaagcttcccaaacctcgacccggctcctgtgcgggtcacggtccagcc
gcgtccttaaagagctccatcgagttcccggacgataccctgcagttcatcaagtcccac
cccctcatggacacggctgtgccgtccatcggggacgagccgtggttcaccaagactcgc
gtcaggtacagactgacagcgctggctgtggacaatgaagcagggccgcacaagaacttc
acagtggtgttcatcggggccgagtctggggttgtcctcaaggtcttagccaagacctcc
gccgtgtctctgaatgacagcgtgctgctggaggagatcgatgtcttcaacagggcaaag
tgcctgtctaaccacgaggacgacaagcgcgtcctctcgctgcacgtggacaaagaggca
cacagcctgtacgtggccttttccagctgtgtcatccgtattcccctgagccgctgtgaa
aggcactcttcctgccacaagtcctgcattgcatcgcgggatccctactgcggctggatg
acccacggggtctgtgagaggatacagccgggcgttttgactggatatgagcaagacgtt
gagttgggaagcaccgctcacctgggagactgccacgcgtttttgggcagtacatcagcg
ccagattacaaatcatttggcgaccctacctctgacatggagttttcaacaacgccagtc
acagcccaccccagtgggcccatacaccccccagtactcatacccactcagagccccagc
tctgggcctggtccagagctctacggctcagaccttgtgccgcaggatgacccagccatc
tctaattctttagactctatcccaagggggcacgagggagtgtgggatattcaagcaggc
gagaccaaccaaatggtccacatgaacatcctcatcacctgcgtgtttgccgcgtttctc
atgggagccctcctggctggtctgatcgtcttctgctaccgagactcgttcctccgcaag
ccgagacgggtccacaaggacgcagagtgtgcaccgtcctgctcggactccaccggaagc
ttcgtcaagctcaacggcctctttgacagccccgtaaaggagtaccagaccaacatcgat
tcccccaagctctacaccaatctgctgagcaacggcaaagacctgaactcacccaacgga
gacaccaagaccatgatcctgcgggacggctgtcagccccccgagctggctgccctgcct
acaccggagtccacccctgtgcttcagcagaaaagcctgcagcccatcaagaaccagtgg
gagagggcccatgcaaaggccagtgggcctcgtaaggagcccaactcatccgccatgagt
cctcagttccttctttcttctgctggcgctcctcccaactccaccaccctcaccaactcc
aaccaccctcaccccgccttgggacactcccacatcccgagtgccgtcgtgctgcccaac
gccacacacgaccactctaacctcgagagtggagaggatacgctgccgcattcttcagaa
aggaagctgaggaacccggactccaagggctgtaggaaagagcagaaaaggtccgtggat
gccagaaataccctcaacgaccttttaaaacaccttaatgactccgtggccaaccccaag
gccattcttccagaggggtcggggcctcgcccacggcctcagctcactctggagcccatg
gaggaactgactgaattaccccccagggtgcccagccgtgaggcttccttgtactccccc
tcctcctccctgccgaggaacagccccaccaagagggtcgacgtgcctctgcccaccact
cccacaacgcccacgggcagcctgagcatggggggcaccctggagaggcaaaggggcggg
tatcaactccaccggagcgcctctcacaggcactccttgtccacctcgcccaacggggtg
accatgggggtgtctgtgtctcgccagcacagtatgaacagagggggttacatgccccca
acgcccccctccagactcgactcgcaaggcggagggggcacggggacggggatgcactcg
gcccaccagtccgctgttccgcggcagggcagctacagcggctacggctcgctcccccgc
acggggctcaaaaggaccccgtcgctgaagccagacgtgccccctaaacccaatgggttt
tcgccacagactccgcagatgcgagtggtcaacaagtacagttactga
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