Pungitius pungitius (ninespine stickleback): 119226827
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Entry
119226827 CDS
T07626
Symbol
notch1a
Name
(RefSeq) neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
119226827 (notch1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
Ank
EGF_2
Notch
NOD
NODP
Ank_4
Ank_3
Ank_5
EGF_3
JAG1-like_EGF2
cEGF
FXa_inhibition
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
119226827
NCBI-ProteinID:
XP_037341043
LinkDB
All DBs
Position
18:complement(3730455..3752943)
Genome browser
AA seq
2477 aa
AA seq
DB search
MHRFFVKLTFLFSAIVLSQGLKCSLPTETCLNGGWCEATSNGNGECKCPSDYVGSRCQYP
SPCSPSPCRNGGECRAVSRGNTFDFHCVCRLGFTDRLCLTPSNHACMSSPCRNGGTCDLI
TLSAFRCRCPPGWSGKTCQLANPCASNPCANGGQCSAFDSTYICTCPPAFHGQTCKQDVN
ECAQNPSPCLNSGLCVNEVGSYSCRCPQEYTGKHCEATYMPCSPSPCLNGGTCVQKGDTV
YACSCLPGFTGQHCDYNIDDCPGHTCQNGAVCVDGVNTYNCRCPPHYTGQYCTENVDECE
LMPNACQNGGTCHDTHGSYHCVCVNGWTGDDCSDNIDDCASAACYSGATCHDRVASFFCE
CPHGRTGLLCHLDDACISNPCQKGSNCDTNPVNGKAICTCPPGYTGSACNLDIDECSLGA
NPCEHGGRCINTQGSFQCKCLQGYEGPRCEMDVNECMSNPCHNDATCLDQIGGFHCICMP
GYEGVFCHINTDECASQPCLNNGKCIDKINSFHCECPKGFSGSLCQVDIDECASTPCKNG
AKCTDGPNKYTCECAEGYSGQHCETDINECYSDPCHYGTCKDGLASFTCYCRPGYTGRLC
ETNINECLSQPCKNGGTCQDRENTYICACPKGTAGYNCEVNLDDCKSRPCDYGRCIDKIN
AYECACEPGYTGTMCNINIDDCAKNPCHNGGTCLDGINRFTCLCPEGYNDATCLSQVDEC
SSNPCIHGRCQDLINGYKCTCDSGWSGPNCDINNNECESNPCMNGGTCKDMTSGYHCTCR
AGFTGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYTGENCEILLAPCSPRPCKN
GGVCKEAEDYQSFSCICPEGWQGQTCEIDINECVKSPCRNGAVCHNTMGGYQCKCQPGYT
GQKCETDTDDCKPNPCSNGGLCRDAINTFTCTCLPGFRGGRCEQDINECESNPCRNGANC
TDCVNSYTCTCPPGFSGINCEVNTNDCTDSSCFNGGTCVDGINAFTCLCLPGFTGSYCQY
DIDECDSKPCLNGGSCLDSYGTYLCTCPHGYIGVNCQILVRWCDSSPCKNGGSCWQQGAS
YTCQCQTGWTGLYCDIPSVSCEVAAKRQGVEVAHLCRNSGQCLDAGNTHYCRCQAGYTGS
YCQEQVDECSPNPCQNGAACTDYLGGYSCECVPGYHGVNCSKEINECQSQPCQNGGTCID
LINTYKCSCPRGTQGVHCEINLDDCTPSSDPLTNEPKCFNNGKCVDRIGGYQCVCPAGYV
GERCEGDVNECLSDPCDPQGSYNCVQLTNSYRCECRTGYTGQRCDKVFDGCKSRPCKNGG
SCAVASNTPHGFICKCPPGFTGSSCEYDSRSCGSLNCRNGGTCVSGHLGPRCLCPPTFTG
PECQTPTDSLCISNPCYNGGTCQVTADAPFFHCSCPSNFNGLLCHILDYSFVGGFGRDIT
PPPEVEVSCEIAQCNEWAGNHICDSLCNNHACGWDGGDCSLNFDDPWQNCSAALQCWRYF
NDGKCDGQCNSPGCLYDGFDCQGQEGQCNPLYDQYCKDHYADGHCDQGCNNAECEWDGLD
CANNMPEKLADGHLVLVVHIPPEQLKNGSSTFLRELSSVLHTNVVFRRDAKGEPMIFPYY
GNEQDLVKHNVLKRSAEGWPEWASMPANVLGQVKESVSAMVSPRKRRELDPVQVKGSVVY
LEIDNRQCYQQSSECFQSATDVAAFLGALATSGNLNVPYIEAVTSVRPTPATSELYPMYV
VFLGLAALGFICLGVLVSRKRRREHGQLWFPEGFKASEPSKKKRREPLGEDSVGLGPMKN
SDINLMDDNQNEWDDQDPDCRRFRFEEQAMLDLSDRTDHRKWTQQHLDAADLRIASIAPT
PPQGETENDCMDVNVRGPDGFTPLMIASCSGGGLETANIEEEEDPSAEIISDFIYQGANL
HNQTDRTGETALHLAARYARSDAAKRLLESSADANVQDNMGRTPLHAAVAADAQGVFQIL
IRNRATDLDARMHDGTTPLILAARLAVEGMVEELINCHADANATDDTGKSALHWAAAVNN
VEAAMVLLKNGANKDMQDNKEETPVFLAAREGSFETAKVLLEHFANREITDHLDQLPRDI
AQERMHHDIVRLLDEYNVVRSPGLHSGPLSTSSLSPPLCSPNDYLSNLKPMLSVKKVRKL
SSGGKGGKDGGKDNRMKKKKSLDGKGNLLDSSAVLSPVDSLESPHGYLSDVASPPMTSPF
QQSPPMSLNHLQGNGDHMGQMSMGKDMGCMSFDHNPPRLSHMPVSSAGTQGTTSIGGSRG
GQCDWISRMHPGVGQQGGFTQGSTISHGMMGALHGVSTATLSQIMGYQNMQTSHLGSSAH
MMQQAHSRQLQHQNSNSTTAGQPLGQGFPNVELNGSDMQQNNGRSMPIHTVMPQETQILG
TQFLTPPSQHSYSGPMDNTPNHQLQVPDHPFLTPSPGSPDQWSSSSPHSNMSDWSEGISS
PPTSIHSQMNLIPDQFK
NT seq
7434 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgtttctttgtgaaactaacatttctgttttctgcaatcgtcctctcacaaggt
ctaaaatgctccctgcccactgagacgtgtctgaatggaggctggtgtgaagccacctcc
aacggaaacggagaatgcaagtgtcccagcgactacgtaggcagtcggtgccagtatccc
agcccctgcagcccttcgccctgccgcaacggcggcgaatgccgcgccgtttcccgcggc
aacaccttcgatttccactgcgtgtgccgcctgggcttcaccgaccggctgtgcctgacc
ccgtccaaccacgcctgcatgagctccccctgtcgcaacgggggaacatgcgatctcatc
accctctccgccttccgctgccgctgcccacctggttggtcaggtaaaacctgtcagctc
gccaacccgtgcgcgtccaacccgtgcgcgaacgggggccagtgctcggctttcgattcc
acctacatctgcacctgcccgccggccttccacggccagacctgcaagcaggacgtcaac
gagtgcgcacagaacccctcgccctgtctcaacagcggcctgtgcgtgaacgaggtgggc
tcgtacagctgccgctgtccccaagagtacaccgggaaacactgcgaggcgacatacatg
ccgtgcagcccctcgccgtgcctgaacggaggcacctgcgtgcagaaaggagacaccgtc
tacgcctgcagctgccttccaggtttcacggggcagcactgtgattacaacatcgacgac
tgtccgggccacacctgccagaatggagctgtgtgtgtggatggtgtgaacacctacaac
tgccgatgcccacctcattacacaggtcaatactgcacagaaaatgtggacgagtgcgag
ttgatgcccaacgcgtgccagaacggaggaacgtgccacgacacccacggcagctaccac
tgcgtctgcgtcaacgggtggacgggtgacgactgcagcgacaacatcgacgactgcgcc
agcgcggcttgttacagcggcgccacctgccacgaccgcgtggcctccttcttctgcgag
tgcccccacggtcgcacaggtctgctgtgccacctggatgacgcctgcatcagcaaccct
tgtcaaaagggttccaactgtgacacgaacccagtcaacgggaaggcgatctgcacctgc
cccccaggttataccgggtcagcctgcaacctggacatcgacgagtgctccctcggtgcc
aacccctgtgagcatggtggccgctgcatcaacacccaaggctcctttcagtgcaagtgc
cttcaaggatacgaaggacctcgttgcgagatggacgtcaatgagtgcatgtccaacccg
tgccataatgatgcaacctgcctggatcagattggggggttccactgcatctgcatgcca
ggatacgagggtgtgttctgccacatcaacacagatgagtgtgccagccaaccttgcctc
aacaatggcaagtgcatcgacaagatcaactccttccactgcgagtgccccaaaggtttt
tcggggagtctgtgtcaggtggacattgacgagtgcgccagcactccctgcaagaacgga
gctaaatgtactgatggtcccaacaagtacacctgcgaatgtgctgaaggttactcgggg
cagcactgtgagactgacatcaatgagtgctactctgacccatgccactatggtacctgc
aaggacggcttagcctccttcacctgctactgccgacctggctacactggccgcttgtgt
gagaccaacatcaacgagtgcctcagccagccctgcaagaatggcggcacttgccaggac
agggagaacacatatatttgcgcttgccccaaaggcacagcgggttacaattgcgaggtc
aacctggacgactgcaagagcagaccgtgcgactacgggaggtgcatcgacaaaatcaac
gcctacgagtgtgcatgtgaacccggctacacaggaacaatgtgtaacatcaacattgac
gattgcgccaagaacccctgtcacaacgggggcacgtgccttgatggcattaaccggttc
acctgcctgtgcccggagggctacaacgacgccacttgtttgtctcaggtcgatgagtgt
agcagcaacccctgcatccacggccgatgccaggacctcatcaacggctacaaatgtacc
tgcgactctggctggagcggccccaactgtgacatcaataacaacgagtgtgagtccaac
ccgtgcatgaacgggggaacctgcaaggacatgaccagcggataccactgcacatgcaga
gctggtttcaccggacctaactgccaaactaacatcaacgagtgtgcctccaacccctgc
ctcaaccagggcacctgcattgacgatgtggctggatacaagtgcaactgtttgctgccc
tacaccggtgaaaactgtgagatcctgctggcaccctgcagccccagaccctgtaaaaac
ggtggagtgtgtaaggaggcggaagactaccagagcttctcctgtatctgccctgaagga
tggcaaggtcaaacatgtgagatcgacatcaacgaatgcgtgaagagcccatgccgcaac
ggtgctgtctgccataacactatgggtggttaccagtgcaagtgccagccaggttacact
ggccagaagtgtgagacggacactgatgactgcaaaccaaatccctgcagtaacggaggt
ctgtgccgcgatgccatcaacactttcacgtgcacctgtcttcccggctttcgtggcggt
agatgcgagcaggacataaacgagtgtgaaagtaacccctgtagaaacggcgccaactgc
accgactgcgtcaacagctacacgtgcacctgcccgcccggtttcagtgggatcaactgt
gaggtcaacaccaacgactgcacggacagctcttgcttcaatggtggcacctgcgtggat
gggattaacgcgttcacctgcctgtgtctacccggattcactggcagctactgccaatat
gatatcgatgagtgcgactccaaaccgtgtctcaatggaggatcttgtctggacagttat
gggacatatttgtgcacgtgtcctcatggctacataggcgtcaattgccagattctggtg
cgctggtgtgattcctccccttgtaaaaatggaggttcgtgctggcagcagggagcgtct
tacacctgccagtgtcagactggatggaccggcctgtattgtgacatccccagtgtgtct
tgtgaggttgcagccaaacggcaaggggtggaggtggctcacctgtgcaggaactcgggc
cagtgcctggatgccggaaacacgcattactgtcgctgccaggccggctacaccgggagc
tactgccaggaacaagtggacgagtgctcaccaaatccttgccagaacggagccgcctgc
acagactatctggggggctacagctgtgagtgtgtccccggctaccacggcgtaaactgc
tccaaagagatcaacgaatgtcagtcacagccctgtcagaacggaggcacgtgcatcgac
ctcatcaacacatacaagtgctcgtgccccagaggaacacaaggtgtccactgtgagatc
aatttggatgactgcaccccctccagcgacccactgaccaatgagcccaagtgcttcaat
aacggcaagtgtgtggaccgcatcgggggctaccagtgcgtgtgcccagcgggctacgta
ggagagcgctgtgagggcgacgtcaacgagtgtctgtcagacccctgtgacccccaaggg
tcttacaactgtgttcagctcaccaacagctaccgctgcgaatgccgcacgggatacaca
ggtcagcgttgtgacaaagtgtttgacggctgtaaatcgagaccctgcaaaaacggaggg
tcatgtgctgttgccagcaacacgcctcatggtttcatctgcaaatgtccgcccggcttc
accggctcctcttgtgagtatgattctcgctcctgcgggagtctgaattgcaggaacggg
ggtacgtgtgtgtcgggccacctaggcccgcgctgcttgtgtccaccaaccttcactggg
ccagagtgccagacccccaccgacagcctctgcatctccaacccctgctacaacggcgga
acgtgccaggtcaccgcggacgcgcctttcttccattgcagctgccccagcaatttcaac
ggcctgctctgccacatcctggactattccttcgtcgggggtttcggccgggacatcacc
ccacctccggaagtggaggtgagctgcgagatagcgcagtgcaacgagtgggccgggaac
cacatctgcgactcgctgtgcaacaaccacgcctgcggctgggacggaggggactgctcg
cttaatttcgatgacccttggcaaaactgctccgcggctctgcagtgctggcgctacttt
aacgacgggaagtgcgacggacagtgcaacagccccgggtgtctctacgatggctttgat
tgtcagggacaggaagggcagtgcaacccgctgtatgaccagtactgtaaggaccactac
gctgacggtcactgtgaccagggctgcaacaatgcagaatgcgaatgggacggcctggac
tgcgccaacaacatgccagagaagctcgcggacgggcatttagtcctggtggtccatatt
ccacccgagcagctaaaaaacggctcttcgaccttcctcagagagctcagcagcgttctc
cacaccaacgtggtgttccgccgcgacgccaagggagaaccaatgatcttcccttactat
ggcaacgaacaggacctggtcaaacacaacgtgctgaagcgctccgcagagggctggccc
gagtgggcgtcaatgcccgccaatgttttgggtcaggtgaaggaaagcgtgtcggccatg
gtcagcccccgcaaacgcagagagctggatccagtgcaagtcaaagggtctgtggtgtac
ctggagattgacaaccgtcagtgctaccagcagtcgagtgaatgcttccagagcgccaca
gatgtagctgcattccttggagcgcttgccactagcgggaatctcaatgttccctacatc
gaagctgtcaccagtgtgagacctactcccgccacttcagagctctaccccatgtacgta
gtcttcctgggcttggctgccttgggtttcatctgccttggtgtcctggtgtctcgcaag
aggcgacgagagcacggccagctttggtttcccgaaggttttaaagcgtcggagcccagt
aaaaagaagcgcagagagccgttgggagaagattctgtgggattggggcctatgaaaaac
tcggacatcaatcttatggatgacaatcaaaacgaatgggatgatcaagatccagactgc
agacgcttcaggtttgaggagcaggccatgctggatttgagcgaccgtacagaccacagg
aaatggacgcagcaacatctggatgcagctgacctgcgcattgcgtccattgctcctacg
cctcctcagggagagacagagaatgactgcatggatgtgaatgtcaggggaccagatggt
ttcactcccctgatgatcgcatcctgcagcggaggaggcctggagaccgctaacatcgaa
gaggaagaggatccctcagcagagatcatctctgactttatttaccaaggcgccaatctc
cacaatcagactgaccgcacgggcgagaccgccctccacctggccgcccgctacgcccgc
tccgatgccgccaaacgcctcctggagtccagcgccgacgccaacgtccaggacaacatg
ggacgcactccgcttcacgctgctgtcgctgcagacgcgcagggagtcttccagatttta
atccgaaaccgcgccactgatcttgacgcccgcatgcacgacggaacaacaccgctcatc
ctggcggcccgactggcggttgagggaatggtggaggagctcatcaactgccacgcggat
gctaacgccaccgacgacactggtaaatctgctcttcactgggccgcggcggtaaacaat
gtggaggcggctatggtgctgctgaaaaatggtgccaacaaagacatgcaagacaacaag
gaggagacaccagttttccttgcagcccgggaaggaagcttcgagacagccaaggttctc
ctggaacactttgccaatcgtgagatcaccgaccatctcgaccagctgcccagagacatc
gcacaggaacgcatgcaccatgacatcgtccgtcttctggatgagtacaacgtggtcagg
agccccgggcttcacagcggcccacttagcacctccagcctctcgccacctctctgctcc
cccaatgactaccttagcaacctcaagcccatgctgtccgtcaagaaggttcgcaaactc
agctccggcggcaagggagggaaggatgggggcaaagataatcgaatgaagaagaagaag
tccctggatggaaagggcaacttgctcgactcttcagccgtcctctcgccggttgattcc
ctcgagtccccgcacggctacctgtccgatgtggcctcccctcccatgacatcgcccttc
cagcagtcgccgcctatgtctctaaatcacctacaaggcaatggagaccatatgggccag
atgagcatgggtaaggatatgggctgtatgtcttttgaccacaaccctccccgtctctcc
cacatgcctgtgtccagcgccggcactcagggtacaacatccataggtggcagcagagga
ggccagtgtgactggatctccaggatgcacccaggtgtaggccagcaagggggcttcacc
caggggtcaaccatatcccacggcatgatgggggccctgcatggcgtcagcactgccacc
ctgtcccagatcatggggtaccagaatatgcagacgagccacctaggttcgtccgcgcac
atgatgcagcaggctcattcccggcagctccagcaccagaactctaactccaccacagcc
ggccagcccctcggccagggcttcccgaacgttgagctgaacggctcagacatgcagcag
aacaacggccgctccatgcccatccacaccgtcatgccgcaggagacgcagatcctcggc
acccagttcctcacccctccctcccagcatagctattctggccccatggacaacacaccc
aaccaccagctacaggtacccgaccacccattcctaaccccctcccccggctcccccgac
caatggtccagctcgtccccacattccaacatgtccgattggtcggaaggcatctcaagc
ccgcctacaagtatccactcgcagatgaatctgatcccggaccagtttaagtag
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integrated database retrieval system
