Pungitius pungitius (ninespine stickleback): 119226831
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Entry
119226831 CDS
T07626
Symbol
ythdc1
Name
(RefSeq) YTH domain-containing protein 1
KO
K20100
YTH domain-containing protein 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppug03041
]
119226831 (ythdc1)
Spliceosome [BR:
ppug03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
119226831 (ythdc1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
119226831
NCBI-ProteinID:
XP_037341048
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All DBs
Position
18:complement(497128..504978)
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AA seq
671 aa
AA seq
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MAADRREDKDGELNVLEDILTEAPDQDDELYNPETERSVSDKKGTKRKSEGSCSQDQKRL
RPSVGHTPSRSSSTNKRAPAPLLSSSKKVSSSPRARHAAASYRHDYYEERKGRRGGREAT
RSRGGEEVRRRDSQRGMEGLSQKLRRTSPAPNEGEHQSEGERPTEYASEPGSGSSSPTTS
HAEEEEDEEEDEEEEEEGMEEEEDDEEEEGEKEEDEEEEYERRGEGNDYDTRSEAGDSRS
ASSISFTDDGESLHSGSASEASGSEKKHEKLSSSVRAVRKGMENPATKLRYILRDARFFL
IKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVVLVFSVRESGKFQGFARLASES
HHGGSPIHWVLPAGMNAKMLGGVFKIDWLCRRELPFTKTAHLTNPWNEHKPVKIGRDGQE
IQPEVGAQLCALFPLDESVDVHQVARCVRHKRRTPSEPRPRGRPPQREPGRRRPEEYDLH
GRKRPRADGPPDFSQRAGFIQDLRNQPVDRRFSSVRRDVFLNGSYNDYMRDYHHSVGPPA
PWQTLATYPGVEPPPPHHPPYYHHNHPPPPPHQAYHHHHHPPLPPHEAPPPRFRDKQRAP
QHRAFTSSPHDYDMRVDDFLRRTQAVVSGRRERERQRERERGGPRRERERERGRDRERER
ERDKERGRYRR
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgaccggcgcgaagacaaagatggagagttaaatgttcttgaagatattctg
actgaagctccagatcaggacgatgagctctacaaccctgagacggaaagatccgtcagc
gacaagaaaggaacaaaaaggaagagtgaaggctcatgcagccaggaccagaagaggctc
cgcccctctgtgggccacaccccttccagatcttcctccaccaataagagagccccggca
ccacttctctcctcctctaaaaaggtgtcgtccagcccccgcgcccgccacgccgccgcc
agctaccgccacgattactatgaggagcgaaagggtcggcgaggaggacgagaggcgacc
aggagccgcggaggagaggaggtccgacggagggactcccagagaggcatggagggtctg
agccagaagttgcggcggactagccccgcccccaacgagggagagcaccaatcagaggga
gagagaccgacagagtacgcctccgagccgggctcaggtagctcctcccccaccacctcc
cacgcagaggaagaggaggatgaggaagaggacgaggaggaagaggaggagggcatggag
gaagaggaggacgacgaggaggaagagggagagaaggaagaggacgaggaagaggagtat
gagcggcgcggcgaggggaacgactacgacactcgcagcgaggccggcgactcccgctcc
gcctcctccatcagcttcactgacgatggcgagtcgctgcactcaggctccgcctctgag
gcctcaggttcagagaagaagcacgagaagctgtcgtcttcagtccgagctgttcgcaaa
ggaatggagaatcccgccactaagttacgttacatcctgcgagatgcccggttcttcctc
ataaagagcaacaaccacgagaacgtgtctctggctaaagctaagggcgtctggtccacg
ctgccggtgaacgagaagaagctgaacgcggcgttccgctcggcccggagcgtcgtcctc
gtcttctccgtgagggagagcgggaaattccaaggtttcgcccgcttggcgtcggagtct
catcacgggggatcgcccatccactgggttcttcccgctggcatgaacgccaagatgctg
ggcggagtcttcaagatagactggctgtgcaggagagaacttcccttcaccaaaaccgct
cacctgaccaacccctggaacgaacacaagcccgttaaaatcggacgtgacggacaggaa
atccaacctgaagttggcgctcagctctgcgccctgttcccattggacgagagcgtggac
gtccaccaagtggctcgatgcgtccgccacaagcgccggacgccgtcggagccgcgcccc
cggggccgaccgccgcaacgcgagccgggaaggcgtcgccctgaagagtacgaccttcac
ggcaggaaacgacctcgagccgacggcccgccggacttcagccagcgagcagggttcatc
caggaccttcgcaaccagccggtggacagacgtttctccagcgtcagacgagacgttttc
ctcaacgggtcctacaatgactacatgagggactaccatcacagcgtcggccccccggct
ccctggcagactctggcaacttaccccggcgtggagccgccacccccccaccatccgccc
tactaccaccacaaccaccccccacccccgcctcaccaagcctaccaccaccaccaccac
ccccctttgccgccgcacgaagctccgccccctcgttttagagacaagcagcgggcgccg
cagcaccgcgccttcacctccagccctcacgactacgacatgcgcgtggacgacttcctg
cggaggacgcaggcggtggtgagcggtcggcgggagcgcgagcgccagcgggaacgcgag
cgcggaggcccccgccgcgagagagagcgcgagcgggggagggaccgagaacgagagcgg
gagagggacaaggagaggggacggtatcgcaggtga
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